RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 DDX11Q96FC9 970 aa15.97■□□□□ 0.15
POLR2J3-217ENST00000513438 TEX13BQ9BXU2 312 aa15.97■□□□□ 0.15
POLR2J3-217ENST00000513438 PRDM5Q9NQX1 630 aaPredicted RBP15.97■□□□□ 0.15
POLR2J3-217ENST00000513438 PCDHB15Q9Y5E8 787 aa15.97■□□□□ 0.15
POLR2J3-217ENST00000513438 PLXNA1Q9UIW2 1896 aa15.97■□□□□ 0.15
POLR2J3-217ENST00000513438 TTC41PQ6P2S7 1318 aa15.96■□□□□ 0.15
POLR2J3-217ENST00000513438 ERC2O15083 957 aa15.96■□□□□ 0.15
POLR2J3-217ENST00000513438 C1orf53Q5VUE5 145 aa15.96■□□□□ 0.15
POLR2J3-217ENST00000513438 SH3RF1Q7Z6J0 888 aa15.96■□□□□ 0.15
POLR2J3-217ENST00000513438 RNF180Q86T96 592 aa15.96■□□□□ 0.15
POLR2J3-217ENST00000513438 PI4K2BQ8TCG2 481 aa15.96■□□□□ 0.15
POLR2J3-217ENST00000513438 OTUD7AQ8TE49 926 aaPredicted RBP15.96■□□□□ 0.15
POLR2J3-217ENST00000513438 BADQ92934 168 aa15.96■□□□□ 0.15
POLR2J3-217ENST00000513438 KIFC2Q96AC6 838 aa15.96■□□□□ 0.15
POLR2J3-217ENST00000513438 CEP95Q96GE4 821 aa15.96■□□□□ 0.15
POLR2J3-217ENST00000513438 RAVER2Q9HCJ3 691 aaKnown RBP15.96■□□□□ 0.15
POLR2J3-217ENST00000513438 MTMR4Q9NYA4 1195 aa15.96■□□□□ 0.15
POLR2J3-217ENST00000513438 PHF24Q9UPV7 400 aa15.96■□□□□ 0.15
POLR2J3-217ENST00000513438 CTDP1Q9Y5B0 961 aaPredicted RBP15.96■□□□□ 0.15
POLR2J3-217ENST00000513438 POTEB2H3BUK9 544 aa15.95■□□□□ 0.14
POLR2J3-217ENST00000513438 ATP2A1O14983 1001 aa15.95■□□□□ 0.14
POLR2J3-217ENST00000513438 AKR1A1P14550 325 aa15.95■□□□□ 0.14
POLR2J3-217ENST00000513438 TLE2Q04725 743 aa15.95■□□□□ 0.14
POLR2J3-217ENST00000513438 SHHQ15465 462 aa15.95■□□□□ 0.14
POLR2J3-217ENST00000513438 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.95■□□□□ 0.14
POLR2J3-217ENST00000513438 NACAP1Q9BZK3 213 aa15.95■□□□□ 0.14
POLR2J3-217ENST00000513438 PDLIM7Q9NR12 457 aa15.95■□□□□ 0.14
POLR2J3-217ENST00000513438 CNPY2Q9Y2B0 182 aa15.95■□□□□ 0.14
POLR2J3-217ENST00000513438 UNC80Q8N2C7 3258 aa15.95■□□□□ 0.14
POLR2J3-217ENST00000513438 MYH4Q9Y623 1939 aa15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 DNAJC25-GNG10A0A024R161 153 aa15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 TRIM43BA6NCK2 446 aa15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 SNAI1O95863 264 aaPredicted RBP15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 TTLL1O95922 423 aa15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 TSPY3P0CV98 308 aa15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 TSPY8P0CW00 308 aa15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 PDE4BQ07343 736 aa15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 ZMYM1Q5SVZ6 1142 aa15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 ZNF697Q5TEC3 545 aa15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 FAM109BQ6ICB4 259 aaPredicted RBP15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 LRRC47Q8N1G4 583 aaKnown RBP15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 MSL3Q8N5Y2 521 aaKnown RBP15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 NEDD1Q8NHV4 660 aa15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 TRIM43Q96BQ3 446 aaPredicted RBP15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 LENG1Q96BZ8 264 aaPredicted RBP15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 FSD1Q9BTV5 496 aa15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 SLC38A10Q9HBR0 1119 aa15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 FEM1BQ9UK73 627 aa15.94■□□□□ 0.14
POLR2J3-217ENST00000513438 TFAP4Q01664 338 aa15.93■□□□□ 0.14
POLR2J3-217ENST00000513438 PPARAQ07869 468 aa15.93■□□□□ 0.14
POLR2J3-217ENST00000513438 C9orf50Q5SZB4 431 aa15.93■□□□□ 0.14
POLR2J3-217ENST00000513438 SLFN13Q68D06 897 aa15.93■□□□□ 0.14
POLR2J3-217ENST00000513438 MAMDC4Q6UXC1 1216 aa15.93■□□□□ 0.14
POLR2J3-217ENST00000513438 GMCL1P1Q8NEA9 526 aa15.93■□□□□ 0.14
POLR2J3-217ENST00000513438 GUCD1Q96NT3 240 aa15.93■□□□□ 0.14
POLR2J3-217ENST00000513438 COL25A1Q9BXS0 654 aaPredicted RBP15.93■□□□□ 0.14
POLR2J3-217ENST00000513438 NAPBQ9H115 298 aa15.93■□□□□ 0.14
POLR2J3-217ENST00000513438 FAM184BQ9ULE4 1060 aa15.93■□□□□ 0.14
POLR2J3-217ENST00000513438 SYNPO2Q9UMS6 1093 aa15.93■□□□□ 0.14
POLR2J3-217ENST00000513438 TACC3Q9Y6A5 838 aa15.93■□□□□ 0.14
POLR2J3-217ENST00000513438 LAMA2P24043 3122 aaKnown RBP15.93■□□□□ 0.14
POLR2J3-217ENST00000513438 SYNGAP1Q96PV0 1343 aa15.93■□□□□ 0.14
POLR2J3-217ENST00000513438 A0A1W2PQ45 241 aaPredicted RBP15.92■□□□□ 0.14
POLR2J3-217ENST00000513438 A0A1W2PQY0 241 aa15.92■□□□□ 0.14
POLR2J3-217ENST00000513438 ADAMTS4O75173 837 aa15.92■□□□□ 0.14
POLR2J3-217ENST00000513438 SLC3A2P08195 630 aaKnown RBP15.92■□□□□ 0.14
POLR2J3-217ENST00000513438 BMP3P12645 472 aa15.92■□□□□ 0.14
POLR2J3-217ENST00000513438 ANKRD35Q8N283 1001 aa15.92■□□□□ 0.14
POLR2J3-217ENST00000513438 TSEN34Q9BSV6 310 aaKnown RBP15.92■□□□□ 0.14
POLR2J3-217ENST00000513438 ZHX1Q9UKY1 873 aaPredicted RBP15.92■□□□□ 0.14
POLR2J3-217ENST00000513438 LTBP2Q14767 1821 aa15.91■□□□□ 0.14
POLR2J3-217ENST00000513438 TMEM232C9JQI7 657 aa15.91■□□□□ 0.14
POLR2J3-217ENST00000513438 CLTBP09497 229 aa15.91■□□□□ 0.14
POLR2J3-217ENST00000513438 MX1P20591 662 aa15.91■□□□□ 0.14
POLR2J3-217ENST00000513438 ITGB8P26012 769 aa15.91■□□□□ 0.14
POLR2J3-217ENST00000513438 ACVR2BQ13705 512 aa15.91■□□□□ 0.14
POLR2J3-217ENST00000513438 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.91■□□□□ 0.14
POLR2J3-217ENST00000513438 ZNF467Q7Z7K2 595 aaPredicted RBP15.91■□□□□ 0.14
POLR2J3-217ENST00000513438 KLHDC9Q8NEP7 349 aa15.91■□□□□ 0.14
POLR2J3-217ENST00000513438 CHST13Q8NET6 341 aa15.91■□□□□ 0.14
POLR2J3-217ENST00000513438 CHMP4CQ96CF2 233 aa15.91■□□□□ 0.14
POLR2J3-217ENST00000513438 INCENPQ9NQS7 918 aa15.91■□□□□ 0.14
POLR2J3-217ENST00000513438 FBXO40Q9UH90 709 aa15.91■□□□□ 0.14
POLR2J3-217ENST00000513438 ISY1Q9ULR0 285 aaKnown RBP15.91■□□□□ 0.14
POLR2J3-217ENST00000513438 PQBP1O60828 265 aaKnown RBP15.9■□□□□ 0.14
POLR2J3-217ENST00000513438 FDX1P10109 184 aa15.9■□□□□ 0.14
POLR2J3-217ENST00000513438 ACLYP53396 1101 aa15.9■□□□□ 0.14
POLR2J3-217ENST00000513438 OAZ1P54368 228 aa15.9■□□□□ 0.14
POLR2J3-217ENST00000513438 CTDSPL2Q05D32 466 aa15.9■□□□□ 0.14
POLR2J3-217ENST00000513438 KCNA10Q16322 511 aa15.9■□□□□ 0.14
POLR2J3-217ENST00000513438 CCDC129Q6ZRS4 1044 aa15.9■□□□□ 0.14
POLR2J3-217ENST00000513438 CHURC1Q8WUH1 139 aa15.9■□□□□ 0.14
POLR2J3-217ENST00000513438 STARD7Q9NQZ5 370 aa15.9■□□□□ 0.14
POLR2J3-217ENST00000513438 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.9■□□□□ 0.14
POLR2J3-217ENST00000513438 SYNRGQ9UMZ2 1314 aa15.9■□□□□ 0.14
POLR2J3-217ENST00000513438 FOXP2O15409 715 aa15.89■□□□□ 0.13
POLR2J3-217ENST00000513438 DUSP11O75319 330 aaKnown RBP15.89■□□□□ 0.13
POLR2J3-217ENST00000513438 RAG1P15918 1043 aa15.89■□□□□ 0.13
POLR2J3-217ENST00000513438 MCCP23508 829 aa15.89■□□□□ 0.13
POLR2J3-217ENST00000513438 STAT2P52630 851 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms