RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 MYO5AQ9Y4I1 1855 aaKnown RBP11.21□□□□□ -0.61
NUP54-211ENST00000512151 ZBBXA8MT70 800 aa11.21□□□□□ -0.61
NUP54-211ENST00000512151 CTAGE5O15320 804 aa11.21□□□□□ -0.61
NUP54-211ENST00000512151 HLA-DOAP06340 250 aa11.21□□□□□ -0.61
NUP54-211ENST00000512151 ARID4AP29374 1257 aaPredicted RBP11.21□□□□□ -0.61
NUP54-211ENST00000512151 SHMT1P34896 483 aa11.21□□□□□ -0.61
NUP54-211ENST00000512151 TMEM132BQ14DG7 1078 aa11.21□□□□□ -0.61
NUP54-211ENST00000512151 SEPT2Q15019 361 aa11.21□□□□□ -0.61
NUP54-211ENST00000512151 CERKLQ49MI3 558 aaPredicted RBP11.21□□□□□ -0.61
NUP54-211ENST00000512151 TMEM67Q5HYA8 995 aa11.21□□□□□ -0.61
NUP54-211ENST00000512151 NAA16Q6N069 864 aaPredicted RBP11.21□□□□□ -0.61
NUP54-211ENST00000512151 MB21D1Q8N884 522 aa11.21□□□□□ -0.61
NUP54-211ENST00000512151 NOL10Q9BSC4 688 aaKnown RBP11.21□□□□□ -0.61
NUP54-211ENST00000512151 NOC4LQ9BVI4 516 aaKnown RBP11.21□□□□□ -0.61
NUP54-211ENST00000512151 UPF3AQ9H1J1 476 aaKnown RBP11.21□□□□□ -0.61
NUP54-211ENST00000512151 KCNH6Q9H252 994 aa11.21□□□□□ -0.61
NUP54-211ENST00000512151 COPRSQ9NQ92 184 aa11.21□□□□□ -0.61
NUP54-211ENST00000512151 LRP2BPQ9P2M1 347 aa11.21□□□□□ -0.61
NUP54-211ENST00000512151 WDFY4Q6ZS81 3184 aa11.21□□□□□ -0.62
NUP54-211ENST00000512151 COL11A1P12107 1806 aaPredicted RBP11.21□□□□□ -0.62
NUP54-211ENST00000512151 PARP14Q460N5 1801 aa11.21□□□□□ -0.62
NUP54-211ENST00000512151 CCER2I3L3R5 266 aa11.2□□□□□ -0.62
NUP54-211ENST00000512151 TLR3O15455 904 aaKnown RBP11.2□□□□□ -0.62
NUP54-211ENST00000512151 DUSP11O75319 330 aaKnown RBP11.2□□□□□ -0.62
NUP54-211ENST00000512151 BAG3O95817 575 aa11.2□□□□□ -0.62
NUP54-211ENST00000512151 C6orf222P0C671 652 aaPredicted RBP11.2□□□□□ -0.62
NUP54-211ENST00000512151 IL9P15248 144 aa11.2□□□□□ -0.62
NUP54-211ENST00000512151 PLCG2P16885 1265 aa11.2□□□□□ -0.62
NUP54-211ENST00000512151 CSPP1Q1MSJ5 1256 aa11.2□□□□□ -0.62
NUP54-211ENST00000512151 HFE2Q6ZVN8 426 aa11.2□□□□□ -0.62
NUP54-211ENST00000512151 SLC43A3Q8NBI5 491 aa11.2□□□□□ -0.62
NUP54-211ENST00000512151 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.2□□□□□ -0.62
NUP54-211ENST00000512151 SCLYQ96I15 445 aa11.2□□□□□ -0.62
NUP54-211ENST00000512151 MRS2Q9HD23 443 aa11.2□□□□□ -0.62
NUP54-211ENST00000512151 SNRKQ9NRH2 765 aa11.2□□□□□ -0.62
NUP54-211ENST00000512151 FAM184BQ9ULE4 1060 aa11.2□□□□□ -0.62
NUP54-211ENST00000512151 CNPY2Q9Y2B0 182 aa11.2□□□□□ -0.62
NUP54-211ENST00000512151 DIS3Q9Y2L1 958 aaKnown RBP11.2□□□□□ -0.62
NUP54-211ENST00000512151 SPTBN4Q9H254 2564 aa11.2□□□□□ -0.62
NUP54-211ENST00000512151 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.19□□□□□ -0.62
NUP54-211ENST00000512151 POTEB3A0JP26 581 aa11.19□□□□□ -0.62
NUP54-211ENST00000512151 ALADP13716 330 aa11.19□□□□□ -0.62
NUP54-211ENST00000512151 SSTR3P32745 418 aaPredicted RBP11.19□□□□□ -0.62
NUP54-211ENST00000512151 POTEBQ6S5H4 581 aa11.19□□□□□ -0.62
NUP54-211ENST00000512151 PRSS33Q8NF86 280 aa11.19□□□□□ -0.62
NUP54-211ENST00000512151 AGBL1Q96MI9 1066 aa11.19□□□□□ -0.62
NUP54-211ENST00000512151 NEUROD6Q96NK8 337 aa11.19□□□□□ -0.62
NUP54-211ENST00000512151 TRPV6Q9H1D0 765 aa11.19□□□□□ -0.62
NUP54-211ENST00000512151 UBE2ZQ9H832 354 aaPredicted RBP11.19□□□□□ -0.62
NUP54-211ENST00000512151 SERPINB13Q9UIV8 391 aa11.19□□□□□ -0.62
NUP54-211ENST00000512151 ZHX1Q9UKY1 873 aaPredicted RBP11.19□□□□□ -0.62
NUP54-211ENST00000512151 GRIN2DO15399 1336 aa11.19□□□□□ -0.62
NUP54-211ENST00000512151 SCN5AQ14524 2016 aa11.19□□□□□ -0.62
NUP54-211ENST00000512151 ST18O60284 1047 aa11.18□□□□□ -0.62
NUP54-211ENST00000512151 FLOT1O75955 427 aa11.18□□□□□ -0.62
NUP54-211ENST00000512151 GJA9P57773 515 aa11.18□□□□□ -0.62
NUP54-211ENST00000512151 BEX3Q00994 111 aa11.18□□□□□ -0.62
NUP54-211ENST00000512151 LEXMQ3ZCV2 418 aa11.18□□□□□ -0.62
NUP54-211ENST00000512151 GNASQ5JWF2 1037 aa11.18□□□□□ -0.62
NUP54-211ENST00000512151 ATF7IPQ6VMQ6 1270 aa11.18□□□□□ -0.62
NUP54-211ENST00000512151 PCSK9Q8NBP7 692 aaKnown RBP11.18□□□□□ -0.62
NUP54-211ENST00000512151 EHD4Q9H223 541 aa11.18□□□□□ -0.62
NUP54-211ENST00000512151 MCM3APO60318 1980 aa11.18□□□□□ -0.62
NUP54-211ENST00000512151 DCXO43602 365 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 B4GALT4O60513 344 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 SLC25A27O95847 323 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 UBTFL1P0CB47 393 aaPredicted RBP11.17□□□□□ -0.62
NUP54-211ENST00000512151 PTGS1P23219 599 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 PLCD1P51178 756 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 KCTD2Q14681 263 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 RIOX2Q8IUF8 465 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 CLEC10AQ8IUN9 316 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 SIAH1Q8IUQ4 282 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 SPICE1Q8N0Z3 855 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 GDPD5Q8WTR4 605 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 CABP5Q9NP86 173 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 FBXO28Q9NVF7 368 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 AKAP2Q9Y2D5 859 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 ASTN1O14525 1302 aa11.17□□□□□ -0.62
NUP54-211ENST00000512151 CXCL17Q6UXB2 119 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 REPS2Q8NFH8 660 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 FGD4Q96M96 766 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 PIH1D3Q9NQM4 214 aaKnown RBP11.16□□□□□ -0.62
NUP54-211ENST00000512151 ADAMTS5Q9UNA0 930 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 PTPRCP08575 1304 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 TECTAO75443 2155 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 PTPRSQ13332 1948 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 ZFHX2Q9C0A1 2572 aaPredicted RBP11.16□□□□□ -0.62
NUP54-211ENST00000512151 LCHNA4D1U4 455 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 RBAK-RBAKDNI3L0D1 243 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 CYP2E1P05181 493 aaPredicted RBP11.16□□□□□ -0.62
NUP54-211ENST00000512151 KCNA5P22460 613 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 GABPAQ06546 454 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 ACVR2BQ13705 512 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 CCDC144BQ3MJ40 725 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 GORABQ5T7V8 394 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 IER5LQ5T953 404 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 PTCRAQ6ISU1 281 aaPredicted RBP11.16□□□□□ -0.62
NUP54-211ENST00000512151 MAMDC4Q6UXC1 1216 aa11.16□□□□□ -0.62
NUP54-211ENST00000512151 DEFB128Q7Z7B8 93 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms