RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 ALG1Q9BT22 464 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 EHD4Q9H223 541 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 TDRD3Q9H7E2 651 aaKnown RBP9.37□□□□□ -0.91
HTT-209ENST00000512068 VEZTQ9HBM0 779 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 DDX4Q9NQI0 724 aaKnown RBP9.37□□□□□ -0.91
HTT-209ENST00000512068 TCP11L1Q9NUJ3 509 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 PI4KBQ9UBF8 816 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 GJA3Q9Y6H8 435 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 TCHHQ07283 1943 aa9.37□□□□□ -0.91
HTT-209ENST00000512068 CFAP99D6REC4 459 aa9.36□□□□□ -0.91
HTT-209ENST00000512068 NFKBIEO00221 500 aa9.36□□□□□ -0.91
HTT-209ENST00000512068 DEXIO95424 95 aa9.36□□□□□ -0.91
HTT-209ENST00000512068 CTDNEP1O95476 244 aa9.36□□□□□ -0.91
HTT-209ENST00000512068 IFNAR1P17181 557 aa9.36□□□□□ -0.91
HTT-209ENST00000512068 RASA1P20936 1047 aa9.36□□□□□ -0.91
HTT-209ENST00000512068 ADD1P35611 737 aaKnown RBP9.36□□□□□ -0.91
HTT-209ENST00000512068 CACNB3P54284 484 aa9.36□□□□□ -0.91
HTT-209ENST00000512068 PNMA1Q8ND90 353 aa9.36□□□□□ -0.91
HTT-209ENST00000512068 NEDD1Q8NHV4 660 aa9.36□□□□□ -0.91
HTT-209ENST00000512068 CCDC17Q96LX7 622 aa9.36□□□□□ -0.91
HTT-209ENST00000512068 ZNF396Q96N95 335 aaPredicted RBP9.36□□□□□ -0.91
HTT-209ENST00000512068 USB1Q9BQ65 265 aaKnown RBP9.36□□□□□ -0.91
HTT-209ENST00000512068 FHDC1Q9C0D6 1143 aaPredicted RBP9.36□□□□□ -0.91
HTT-209ENST00000512068 IL21Q9HBE4 155 aa9.36□□□□□ -0.91
HTT-209ENST00000512068 SENP2Q9HC62 589 aa9.36□□□□□ -0.91
HTT-209ENST00000512068 ZDHHC9Q9Y397 364 aa9.36□□□□□ -0.91
HTT-209ENST00000512068 MYH15Q9Y2K3 1946 aa9.36□□□□□ -0.91
HTT-209ENST00000512068 COL2A1P02458 1487 aaPredicted RBP9.35□□□□□ -0.91
HTT-209ENST00000512068 DICER1Q9UPY3 1922 aaKnown RBP9.35□□□□□ -0.91
HTT-209ENST00000512068 CLRN2A0PK11 232 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 GOLGA6L4A6NEF3 574 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 TCP10L2B9ZVM9 353 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 SMIM22K7EJ46 135 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 FIBPO43427 364 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 TRAK2O60296 914 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 NMT2O60551 498 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 DTNBO60941 627 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 PPFIA3O75145 1194 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 PRPF40AO75400 957 aaKnown RBP9.35□□□□□ -0.91
HTT-209ENST00000512068 MBD3O95983 291 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 TOP1P11387 765 aaKnown RBP9.35□□□□□ -0.91
HTT-209ENST00000512068 LMNB1P20700 586 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 CDC27P30260 824 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 NFIAQ12857 509 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 MMRN1Q13201 1228 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 TNFAIP1Q13829 316 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 DESI1Q6ICB0 168 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 FERMT3Q86UX7 667 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 FOXP4Q8IVH2 680 aaPredicted RBP9.35□□□□□ -0.91
HTT-209ENST00000512068 RGS22Q8NE09 1264 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 PRR7Q8TB68 274 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 PHKBQ93100 1093 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 MAP3K14Q99558 947 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 RNF26Q9BY78 433 aaPredicted RBP9.35□□□□□ -0.91
HTT-209ENST00000512068 BRMS1Q9HCU9 246 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 CABP5Q9NP86 173 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 MYOZ2Q9NPC6 264 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 ZNF70Q9UC06 446 aaPredicted RBP9.35□□□□□ -0.91
HTT-209ENST00000512068 CFAP45Q9UL16 551 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 DDX49Q9Y6V7 483 aaKnown RBP9.35□□□□□ -0.91
HTT-209ENST00000512068 COL4A5P29400 1685 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 PLIN4Q96Q06 1357 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 MYH4Q9Y623 1939 aa9.35□□□□□ -0.91
HTT-209ENST00000512068 H7C1D1 291 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 AP1G2O75843 785 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 TTLL1O95922 423 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 ATP2B2Q01814 1243 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 GUCY1B3Q02153 619 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 MCM6Q14566 821 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 CERKLQ49MI3 558 aaPredicted RBP9.34□□□□□ -0.91
HTT-209ENST00000512068 CCDC82Q8N4S0 544 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 MTMR14Q8NCE2 650 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 NKX2-3Q8TAU0 364 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 ANKS1AQ92625 1134 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 SYAP1Q96A49 352 aaPredicted RBP9.34□□□□□ -0.91
HTT-209ENST00000512068 PRMT6Q96LA8 375 aaPredicted RBP9.34□□□□□ -0.91
HTT-209ENST00000512068 CSRNP1Q96S65 589 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 GMLQ99445 158 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 SPSB2Q99619 263 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 LZTS2Q9BRK4 669 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 SCAND2PQ9GZW5 306 aaPredicted RBP9.34□□□□□ -0.91
HTT-209ENST00000512068 HERC5Q9UII4 1024 aaKnown RBP9.34□□□□□ -0.91
HTT-209ENST00000512068 ISY1Q9ULR0 285 aaKnown RBP9.34□□□□□ -0.91
HTT-209ENST00000512068 MTMR7Q9Y216 660 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 PCDHAC2Q9Y5I4 1007 aa9.34□□□□□ -0.91
HTT-209ENST00000512068 FZD9O00144 591 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 SOCS7O14512 581 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 PARP1P09874 1014 aaKnown RBP9.33□□□□□ -0.92
HTT-209ENST00000512068 AKR1B1P15121 316 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 DNM1Q05193 864 aaKnown RBP9.33□□□□□ -0.92
HTT-209ENST00000512068 GABPAQ06546 454 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 GRM4Q14833 912 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 FKBP1CQ5VVH2 108 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 ATL3Q6DD88 541 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 TMTC3Q6ZXV5 915 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 BRAPQ7Z569 592 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 FBXO18Q8NFZ0 1043 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 FAM151AQ8WW52 585 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 DPF2Q92785 391 aa9.33□□□□□ -0.92
HTT-209ENST00000512068 CEP95Q96GE4 821 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms