RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 SMC1BQ8NDV3 1235 aa11.82□□□□□ -0.52
NEK1-205ENST00000510108 FBXO18Q8NFZ0 1043 aa11.82□□□□□ -0.52
NEK1-205ENST00000510108 DCAF4Q8WV16 495 aa11.82□□□□□ -0.52
NEK1-205ENST00000510108 SLC26A6Q9BXS9 759 aa11.82□□□□□ -0.52
NEK1-205ENST00000510108 SCAF8Q9UPN6 1271 aaKnown RBP11.82□□□□□ -0.52
NEK1-205ENST00000510108 USP17L5A8MUK1 530 aa11.81□□□□□ -0.52
NEK1-205ENST00000510108 DTNBO60941 627 aa11.81□□□□□ -0.52
NEK1-205ENST00000510108 TOMM70O94826 608 aa11.81□□□□□ -0.52
NEK1-205ENST00000510108 NUDT7P0C024 238 aa11.81□□□□□ -0.52
NEK1-205ENST00000510108 PKN1Q16512 942 aa11.81□□□□□ -0.52
NEK1-205ENST00000510108 SLC35G1Q2M3R5 365 aa11.81□□□□□ -0.52
NEK1-205ENST00000510108 GPATCH4Q5T3I0 446 aaKnown RBP11.81□□□□□ -0.52
NEK1-205ENST00000510108 STAG2Q8N3U4 1231 aa11.81□□□□□ -0.52
NEK1-205ENST00000510108 GMCL1Q96IK5 515 aa11.81□□□□□ -0.52
NEK1-205ENST00000510108 C8orf76Q96K31 380 aa11.81□□□□□ -0.52
NEK1-205ENST00000510108 ALG1Q9BT22 464 aa11.81□□□□□ -0.52
NEK1-205ENST00000510108 RIOX1Q9H6W3 641 aa11.81□□□□□ -0.52
NEK1-205ENST00000510108 SH2D4AQ9H788 454 aa11.81□□□□□ -0.52
NEK1-205ENST00000510108 ARHGEF10LQ9HCE6 1279 aa11.81□□□□□ -0.52
NEK1-205ENST00000510108 TMX2Q9Y320 296 aa11.81□□□□□ -0.52
NEK1-205ENST00000510108 A0A1W2PRG0 241 aa11.8□□□□□ -0.52
NEK1-205ENST00000510108 VPS37CA5D8V6 355 aaPredicted RBP11.8□□□□□ -0.52
NEK1-205ENST00000510108 CYTH3O43739 400 aa11.8□□□□□ -0.52
NEK1-205ENST00000510108 RESTQ13127 1097 aa11.8□□□□□ -0.52
NEK1-205ENST00000510108 PFKFB3Q16875 520 aaPredicted RBP11.8□□□□□ -0.52
NEK1-205ENST00000510108 RASGRP2Q7LDG7 609 aa11.8□□□□□ -0.52
NEK1-205ENST00000510108 KRT26Q7Z3Y9 468 aa11.8□□□□□ -0.52
NEK1-205ENST00000510108 SCYL3Q8IZE3 742 aa11.8□□□□□ -0.52
NEK1-205ENST00000510108 CMTR1Q8N1G2 835 aaKnown RBP11.8□□□□□ -0.52
NEK1-205ENST00000510108 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.8□□□□□ -0.52
NEK1-205ENST00000510108 KLRG1Q96E93 195 aa11.8□□□□□ -0.52
NEK1-205ENST00000510108 GBP4Q96PP9 640 aa11.8□□□□□ -0.52
NEK1-205ENST00000510108 ZSCAN16Q9H4T2 348 aaPredicted RBP11.8□□□□□ -0.52
NEK1-205ENST00000510108 ATP6V1DQ9Y5K8 247 aa11.8□□□□□ -0.52
NEK1-205ENST00000510108 ADM5C9JUS6 153 aa11.79□□□□□ -0.52
NEK1-205ENST00000510108 KLRF2D3W0D1 207 aa11.79□□□□□ -0.52
NEK1-205ENST00000510108 H3BQV1 296 aa11.79□□□□□ -0.52
NEK1-205ENST00000510108 EVI5O60447 810 aa11.79□□□□□ -0.52
NEK1-205ENST00000510108 BAG4O95429 457 aaKnown RBP11.79□□□□□ -0.52
NEK1-205ENST00000510108 AKAP17AQ02040 695 aaKnown RBP11.79□□□□□ -0.52
NEK1-205ENST00000510108 IFFO2Q5TF58 517 aa11.79□□□□□ -0.52
NEK1-205ENST00000510108 SLFN13Q68D06 897 aa11.79□□□□□ -0.52
NEK1-205ENST00000510108 USP17L2Q6R6M4 530 aa11.79□□□□□ -0.52
NEK1-205ENST00000510108 USP48Q86UV5 1035 aa11.79□□□□□ -0.52
NEK1-205ENST00000510108 RBM46Q8TBY0 533 aaKnown RBP11.79□□□□□ -0.52
NEK1-205ENST00000510108 MTMR8Q96EF0 704 aa11.79□□□□□ -0.52
NEK1-205ENST00000510108 AIFM3Q96NN9 605 aa11.79□□□□□ -0.52
NEK1-205ENST00000510108 VCPKMTQ9H867 229 aa11.79□□□□□ -0.52
NEK1-205ENST00000510108 F5H6K3 240 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 UBE2Q2LH0YL09 131 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 hCG_1984214I3L0E3 225 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 PPFIA3O75145 1194 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 NDUFB10O96000 172 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 SCG2P13521 617 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 INPP5BP32019 993 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 ECE1P42892 770 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 KLRC3Q07444 240 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 FSTL1Q12841 308 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 MAP3K11Q16584 847 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 KRT40Q6A162 431 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 BTNL9Q6UXG8 535 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 ZNF713Q8N859 430 aaPredicted RBP11.78□□□□□ -0.52
NEK1-205ENST00000510108 SHISA4Q96DD7 197 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 WDR18Q9BV38 432 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 GOPCQ9HD26 462 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 SH3GLB2Q9NR46 395 aa11.78□□□□□ -0.52
NEK1-205ENST00000510108 V9GY48 417 aaPredicted RBP11.78□□□□□ -0.52
NEK1-205ENST00000510108 PARP14Q460N5 1801 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 LOC285556D6RIA3 1793 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 PLA2G6O60733 806 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 MMP1P03956 469 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 GOLGA8HP0CJ92 632 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 XBP1P17861 261 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 MCM4P33991 863 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 SLC1A4P43007 532 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 ATP2B2Q01814 1243 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 KIF23Q02241 960 aaPredicted RBP11.77□□□□□ -0.53
NEK1-205ENST00000510108 TRIM29Q14134 588 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 NFKBIBQ15653 356 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 BRAPQ7Z569 592 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 CCDC82Q8N4S0 544 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 TMEM87AQ8NBN3 555 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 ACER1Q8TDN7 264 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 CDCA5Q96FF9 252 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 WRNIP1Q96S55 665 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 PHF20Q9BVI0 1012 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 KIAA1683Q9H0B3 1180 aa11.77□□□□□ -0.53
NEK1-205ENST00000510108 FRMPD2Q68DX3 1309 aaPredicted RBP11.76□□□□□ -0.53
NEK1-205ENST00000510108 PTPRFP10586 1907 aa11.76□□□□□ -0.53
NEK1-205ENST00000510108 SPDYE16A6NNV3 312 aaPredicted RBP11.76□□□□□ -0.53
NEK1-205ENST00000510108 DDX11L8A8MPP1 907 aa11.76□□□□□ -0.53
NEK1-205ENST00000510108 USP2O75604 605 aaPredicted RBP11.76□□□□□ -0.53
NEK1-205ENST00000510108 BMP3P12645 472 aa11.76□□□□□ -0.53
NEK1-205ENST00000510108 PTPRAP18433 802 aa11.76□□□□□ -0.53
NEK1-205ENST00000510108 U2AF2P26368 475 aaKnown RBP eCLIP11.76□□□□□ -0.53
NEK1-205ENST00000510108 TTLL12Q14166 644 aaPredicted RBP11.76□□□□□ -0.53
NEK1-205ENST00000510108 CCDC96Q2M329 555 aa11.76□□□□□ -0.53
NEK1-205ENST00000510108 PRAMEF18Q5VWM3 479 aa11.76□□□□□ -0.53
NEK1-205ENST00000510108 MAP1SQ66K74 1059 aaPredicted RBP11.76□□□□□ -0.53
NEK1-205ENST00000510108 ATL3Q6DD88 541 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms