RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 A0A1W2PQY0 241 aa19.09■□□□□ 0.65
RAB40C-202ENST00000509637 MINDY4BA8MYZ0 360 aa19.09■□□□□ 0.65
RAB40C-202ENST00000509637 KLHDC9Q8NEP7 349 aa19.09■□□□□ 0.65
RAB40C-202ENST00000509637 OTUD7AQ8TE49 926 aaPredicted RBP19.09■□□□□ 0.65
RAB40C-202ENST00000509637 GOPCQ9HD26 462 aa19.09■□□□□ 0.65
RAB40C-202ENST00000509637 ARPP21Q9UBL0 812 aaPredicted RBP19.09■□□□□ 0.65
RAB40C-202ENST00000509637 NRBP1Q9UHY1 535 aa19.09■□□□□ 0.65
RAB40C-202ENST00000509637 CUL9Q8IWT3 2517 aa19.08■□□□□ 0.65
RAB40C-202ENST00000509637 FOXP2O15409 715 aa19.08■□□□□ 0.64
RAB40C-202ENST00000509637 RARBP10826 455 aa19.08■□□□□ 0.64
RAB40C-202ENST00000509637 KCTD2Q14681 263 aa19.08■□□□□ 0.64
RAB40C-202ENST00000509637 APPBP2Q92624 585 aa19.08■□□□□ 0.64
RAB40C-202ENST00000509637 SLF1Q9BQI6 1058 aa19.08■□□□□ 0.64
RAB40C-202ENST00000509637 RAVER2Q9HCJ3 691 aaKnown RBP19.08■□□□□ 0.64
RAB40C-202ENST00000509637 CLIP2Q9UDT6 1046 aa19.08■□□□□ 0.64
RAB40C-202ENST00000509637 PRKAG2Q9UGJ0 569 aa19.08■□□□□ 0.64
RAB40C-202ENST00000509637 KIAA0355O15063 1070 aa19.07■□□□□ 0.64
RAB40C-202ENST00000509637 RNF113AO15541 343 aaKnown RBP19.07■□□□□ 0.64
RAB40C-202ENST00000509637 GPAA1O43292 621 aa19.07■□□□□ 0.64
RAB40C-202ENST00000509637 PTGS1P23219 599 aa19.07■□□□□ 0.64
RAB40C-202ENST00000509637 FAAP100Q0VG06 881 aa19.07■□□□□ 0.64
RAB40C-202ENST00000509637 SNRNP48Q6IEG0 339 aaKnown RBP19.07■□□□□ 0.64
RAB40C-202ENST00000509637 MAMDC4Q6UXC1 1216 aa19.07■□□□□ 0.64
RAB40C-202ENST00000509637 CPXCR1Q8N123 301 aa19.07■□□□□ 0.64
RAB40C-202ENST00000509637 MKL1Q969V6 931 aa19.07■□□□□ 0.64
RAB40C-202ENST00000509637 CEP95Q96GE4 821 aa19.07■□□□□ 0.64
RAB40C-202ENST00000509637 INCENPQ9NQS7 918 aa19.07■□□□□ 0.64
RAB40C-202ENST00000509637 DDX49Q9Y6V7 483 aaKnown RBP19.07■□□□□ 0.64
RAB40C-202ENST00000509637 MYH4Q9Y623 1939 aa19.07■□□□□ 0.64
RAB40C-202ENST00000509637 UNC80Q8N2C7 3258 aa19.07■□□□□ 0.64
RAB40C-202ENST00000509637 EYSQ5T1H1 3165 aa19.06■□□□□ 0.64
RAB40C-202ENST00000509637 SYNRGQ9UMZ2 1314 aa19.06■□□□□ 0.64
RAB40C-202ENST00000509637 CTAGE5O15320 804 aa19.06■□□□□ 0.64
RAB40C-202ENST00000509637 ZSCAN25Q6NSZ9 544 aa19.06■□□□□ 0.64
RAB40C-202ENST00000509637 GIMAP6Q6P9H5 292 aa19.06■□□□□ 0.64
RAB40C-202ENST00000509637 KATNBL1Q9H079 304 aa19.06■□□□□ 0.64
RAB40C-202ENST00000509637 MTMR4Q9NYA4 1195 aa19.06■□□□□ 0.64
RAB40C-202ENST00000509637 ATP2A1O14983 1001 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 PQBP1O60828 265 aaKnown RBP19.05■□□□□ 0.64
RAB40C-202ENST00000509637 CLTBP09497 229 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 AKR1A1P14550 325 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 SLC4A3P48751 1232 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 ACLYP53396 1101 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 KCNA10Q16322 511 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.05■□□□□ 0.647e-7■■■□□ 16.7
RAB40C-202ENST00000509637 C16orf59Q7L2K0 433 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 RASGRP2Q7LDG7 609 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.05■□□□□ 0.64
RAB40C-202ENST00000509637 AMOTL1Q8IY63 956 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 LRRC47Q8N1G4 583 aaKnown RBP19.05■□□□□ 0.64
RAB40C-202ENST00000509637 PRPF38AQ8NAV1 312 aaKnown RBP19.05■□□□□ 0.64
RAB40C-202ENST00000509637 MYLIPQ8WY64 445 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 CHMP4CQ96CF2 233 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 TEX13BQ9BXU2 312 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 MKNK2Q9HBH9 465 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 SLC38A10Q9HBR0 1119 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 PCDHB15Q9Y5E8 787 aa19.05■□□□□ 0.64
RAB40C-202ENST00000509637 CNTN2Q02246 1040 aa19.04■□□□□ 0.64
RAB40C-202ENST00000509637 ZNF697Q5TEC3 545 aa19.04■□□□□ 0.64
RAB40C-202ENST00000509637 RNF180Q86T96 592 aa19.04■□□□□ 0.64
RAB40C-202ENST00000509637 IFNL3Q8IZI9 196 aa19.04■□□□□ 0.64
RAB40C-202ENST00000509637 PI4K2BQ8TCG2 481 aa19.04■□□□□ 0.64
RAB40C-202ENST00000509637 KIFC2Q96AC6 838 aa19.04■□□□□ 0.64
RAB40C-202ENST00000509637 DDRGK1Q96HY6 314 aa19.04■□□□□ 0.64
RAB40C-202ENST00000509637 ZNF536O15090 1300 aa19.03■□□□□ 0.64
RAB40C-202ENST00000509637 CDK7P50613 346 aa19.03■□□□□ 0.64
RAB40C-202ENST00000509637 SMAD3P84022 425 aaKnown RBP19.03■□□□□ 0.64
RAB40C-202ENST00000509637 TMEM63BQ5T3F8 832 aa19.03■□□□□ 0.64
RAB40C-202ENST00000509637 ANKRD33Q7Z3H0 272 aa19.03■□□□□ 0.64
RAB40C-202ENST00000509637 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-202ENST00000509637 ASTN1O14525 1302 aa19.02■□□□□ 0.64
RAB40C-202ENST00000509637 SYNGAP1Q96PV0 1343 aa19.02■□□□□ 0.64
RAB40C-202ENST00000509637 PATL2C9JE40 543 aaKnown RBP19.02■□□□□ 0.64
RAB40C-202ENST00000509637 ACVR2BQ13705 512 aa19.02■□□□□ 0.64
RAB40C-202ENST00000509637 NEDD1Q8NHV4 660 aa19.02■□□□□ 0.64
RAB40C-202ENST00000509637 DDX11Q96FC9 970 aa19.02■□□□□ 0.64
RAB40C-202ENST00000509637 TSEN34Q9BSV6 310 aaKnown RBP19.02■□□□□ 0.64
RAB40C-202ENST00000509637 ZHX1Q9UKY1 873 aaPredicted RBP19.02■□□□□ 0.64
RAB40C-202ENST00000509637 TBX21Q9UL17 535 aa19.02■□□□□ 0.64
RAB40C-202ENST00000509637 FAM184BQ9ULE4 1060 aa19.02■□□□□ 0.64
RAB40C-202ENST00000509637 PRUNE2Q8WUY3 3088 aa19.02■□□□□ 0.64
RAB40C-202ENST00000509637 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.01■□□□□ 0.63
RAB40C-202ENST00000509637 SOWAHBA6NEL2 793 aa19.01■□□□□ 0.63
RAB40C-202ENST00000509637 COPB2P35606 906 aa19.01■□□□□ 0.63
RAB40C-202ENST00000509637 SNAP25P60880 206 aa19.01■□□□□ 0.63
RAB40C-202ENST00000509637 MSL3Q8N5Y2 521 aaKnown RBP19.01■□□□□ 0.63
RAB40C-202ENST00000509637 UPF3AQ9H1J1 476 aaKnown RBP19.01■□□□□ 0.63
RAB40C-202ENST00000509637 TMEM39AQ9NV64 488 aa19.01■□□□□ 0.63
RAB40C-202ENST00000509637 CNPY2Q9Y2B0 182 aa19.01■□□□□ 0.63
RAB40C-202ENST00000509637 DUSP11O75319 330 aaKnown RBP19■□□□□ 0.63
RAB40C-202ENST00000509637 RAG1P15918 1043 aa19■□□□□ 0.63
RAB40C-202ENST00000509637 CCDC144BQ3MJ40 725 aa19■□□□□ 0.63
RAB40C-202ENST00000509637 ZMYM1Q5SVZ6 1142 aa19■□□□□ 0.63
RAB40C-202ENST00000509637 SLFN13Q68D06 897 aa19■□□□□ 0.63
RAB40C-202ENST00000509637 CCDC129Q6ZRS4 1044 aa19■□□□□ 0.63
RAB40C-202ENST00000509637 ARMCX2Q7L311 632 aa19■□□□□ 0.63
RAB40C-202ENST00000509637 ZNF467Q7Z7K2 595 aaPredicted RBP19■□□□□ 0.63
RAB40C-202ENST00000509637 ZNF444Q8N0Y2 327 aaPredicted RBP19■□□□□ 0.63
RAB40C-202ENST00000509637 FAM133AQ8N9E0 248 aa19■□□□□ 0.63
RAB40C-202ENST00000509637 GMCL1P1Q8NEA9 526 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms