RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 CTSOP43234 321 aaPredicted RBP10.66□□□□□ -0.7
COL4A3BP-206ENST00000508809 SCTRP47872 440 aa10.66□□□□□ -0.7
COL4A3BP-206ENST00000508809 OXLD1Q5BKU9 147 aa10.66□□□□□ -0.7
COL4A3BP-206ENST00000508809 DDX4Q9NQI0 724 aaKnown RBP10.66□□□□□ -0.7
COL4A3BP-206ENST00000508809 PA2G4Q9UQ80 394 aaKnown RBP10.66□□□□□ -0.7
COL4A3BP-206ENST00000508809 HDAC5Q9UQL6 1122 aa10.66□□□□□ -0.7
COL4A3BP-206ENST00000508809 LRRFIP2Q9Y608 721 aaKnown RBP10.66□□□□□ -0.7
COL4A3BP-206ENST00000508809 DOCK1Q14185 1865 aa10.66□□□□□ -0.7
COL4A3BP-206ENST00000508809 INHAP05111 366 aa10.65□□□□□ -0.7
COL4A3BP-206ENST00000508809 ELNP15502 786 aa10.65□□□□□ -0.7
COL4A3BP-206ENST00000508809 RHBDL3P58872 404 aa10.65□□□□□ -0.7
COL4A3BP-206ENST00000508809 TIMM10P62072 90 aa10.65□□□□□ -0.7
COL4A3BP-206ENST00000508809 RASGRF1Q13972 1273 aa10.65□□□□□ -0.7
COL4A3BP-206ENST00000508809 SPTY2D1Q68D10 685 aaPredicted RBP10.65□□□□□ -0.7
COL4A3BP-206ENST00000508809 GADL1Q6ZQY3 521 aa10.65□□□□□ -0.7
COL4A3BP-206ENST00000508809 ZSCAN29Q8IWY8 852 aaPredicted RBP10.65□□□□□ -0.7
COL4A3BP-206ENST00000508809 PHTF2Q8N3S3 785 aa10.65□□□□□ -0.7
COL4A3BP-206ENST00000508809 ZNF384Q8TF68 577 aa10.65□□□□□ -0.7
COL4A3BP-206ENST00000508809 AGTPBP1Q9UPW5 1226 aa10.65□□□□□ -0.7
COL4A3BP-206ENST00000508809 ALPK3Q96L96 1907 aa10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 TRIM75PA6NK02 468 aa10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 TNPO2O14787 897 aaKnown RBP10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 MAP4K4O95819 1239 aaPredicted RBP10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 TFRCP02786 760 aaKnown RBP10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 CT47B1P0C2W7 299 aaPredicted RBP10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 GPC1P35052 558 aa10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 BTDP43251 543 aa10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 FAM110CQ1W6H9 321 aa10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 DZIP1Q86YF9 867 aaKnown RBP10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 PLPP7Q8NBV4 271 aa10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 SMCR8Q8TEV9 937 aaPredicted RBP10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 XAGE2Q96GT9 111 aa10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 DEFB118Q96PH6 123 aa10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 OSBPL3Q9H4L5 887 aa10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 SMC4Q9NTJ3 1288 aa10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 ABCF2Q9UG63 623 aa10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 GJD2Q9UKL4 321 aa10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 NOB1Q9ULX3 412 aaKnown RBP10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 DNAH12Q6ZR08 3092 aa10.64□□□□□ -0.71
COL4A3BP-206ENST00000508809 MROH7-TTC4A0A0A0MT08 1334 aa10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 LAMA2P24043 3122 aaKnown RBP10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 A0A1W2PRU2 124 aa10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 TRAK2O60296 914 aa10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 GCLCP48506 637 aaPredicted RBP10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 MECOMQ03112 1051 aa10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 TREML2Q5T2D2 321 aa10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 ERICH6Q7L0X2 663 aa10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 ANKRD13CQ8N6S4 541 aa10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 RNF217Q8TC41 542 aa10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 IRF7Q92985 503 aa10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 CLUAP1Q96AJ1 413 aa10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 COA7Q96BR5 231 aa10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 OSBPL5Q9H0X9 879 aaPredicted RBP10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 AKAP2Q9Y2D5 859 aa10.63□□□□□ -0.71
COL4A3BP-206ENST00000508809 COL2A1P02458 1487 aaPredicted RBP10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 A0A1B0GUL7 405 aa10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 BMP8BP34820 402 aa10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 NFX1Q12986 1120 aaKnown RBP10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 CLN3Q13286 438 aa10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 PICALMQ13492 652 aa10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 MTX1Q13505 466 aa10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 MVPQ14764 893 aaKnown RBP10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 LYSMD3Q7Z3D4 306 aa10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 NECAB2Q7Z6G3 386 aa10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 CCDC84Q86UT8 332 aaPredicted RBP10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 KDF1Q8NAX2 398 aaPredicted RBP10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 ZNF280CQ8ND82 737 aa10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 NSUN4Q96CB9 384 aaKnown RBP10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 PAWRQ96IZ0 340 aaKnown RBP10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 MEIS3Q99687 375 aa10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 API5Q9BZZ5 524 aaKnown RBP10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 ALG2Q9H553 416 aa10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 ARHGEF10LQ9HCE6 1279 aa10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 LOC285556D6RIA3 1793 aa10.62□□□□□ -0.71
COL4A3BP-206ENST00000508809 PLXNB2O15031 1838 aa10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 ATAD5Q96QE3 1844 aa10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 LZTS3O60299 673 aaPredicted RBP10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 LDHCP07864 332 aa10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 SKIP12755 728 aa10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 CAP2P40123 477 aa10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 RNF144AP50876 292 aaPredicted RBP10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 TFCP2Q12800 502 aa10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 SPP2Q13103 211 aa10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 RRP1BQ14684 758 aaKnown RBP10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 ARHGAP45Q92619 1136 aa10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 GDF15Q99988 308 aa10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 HMG20BQ9P0W2 317 aa10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 STAP2Q9UGK3 403 aa10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.61□□□□□ -0.71
COL4A3BP-206ENST00000508809 RPTORQ8N122 1335 aa10.6□□□□□ -0.71
COL4A3BP-206ENST00000508809 CUL9Q8IWT3 2517 aa10.6□□□□□ -0.71
COL4A3BP-206ENST00000508809 UNC80Q8N2C7 3258 aa10.6□□□□□ -0.71
COL4A3BP-206ENST00000508809 A6NJR5 290 aa10.6□□□□□ -0.71
COL4A3BP-206ENST00000508809 USP17L5A8MUK1 530 aa10.6□□□□□ -0.71
COL4A3BP-206ENST00000508809 H3BM21 787 aa10.6□□□□□ -0.71
COL4A3BP-206ENST00000508809 SOX1O00570 391 aaPredicted RBP10.6□□□□□ -0.71
COL4A3BP-206ENST00000508809 SRGAP3O43295 1099 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms