RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 MXD3Q9BW11 206 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 DHX36Q9H2U1 1008 aaKnown RBP13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 PCDHB6Q9Y5E3 794 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 PCDHA5Q9Y5H7 936 aa13.16□□□□□ -0.3
PRPF40B-203ENST00000508736 POLR2DO15514 142 aaKnown RBP13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 CTIFO43310 598 aaKnown RBP13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 HLA-DOAP06340 250 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 SCNN1DP51172 638 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 UBASH3AP57075 661 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 PICALMQ13492 652 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 SYCP1Q15431 976 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 NT5DC1Q5TFE4 455 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 ISM2Q6H9L7 571 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 CCAR2Q8N163 923 aaKnown RBP13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 STAG2Q8N3U4 1231 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 DAGLBQ8NCG7 672 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 CEP95Q96GE4 821 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 PSMD1Q99460 953 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 VPS33BQ9H267 617 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 ZNF277Q9NRM2 450 aaPredicted RBP13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 UTRNP46939 3433 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 SCN9AQ15858 1988 aa13.15□□□□□ -0.3
PRPF40B-203ENST00000508736 hCG_1642624A0A1W2PR95 340 aa13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 NLRP5P59047 1200 aa13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 MDM2Q00987 491 aaPredicted RBP13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 NYAP1Q6ZVC0 841 aa13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 KCNQ5Q9NR82 932 aa13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 MTMR4Q9NYA4 1195 aa13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 TUBB4AP04350 444 aa13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 PARP1P09874 1014 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 AOC3Q16853 763 aa13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 CFAP100Q494V2 611 aa13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 CT47A1Q5JQC4 288 aaPredicted RBP13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 CCDC17Q96LX7 622 aa13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 TAOK3Q9H2K8 898 aa13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 MAN1B1Q9UKM7 699 aa13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 PCDHA4Q9UN74 947 aa13.14□□□□□ -0.31
PRPF40B-203ENST00000508736 ADAMTSL1Q8N6G6 1762 aa13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 GREB1LQ9C091 1923 aaPredicted RBP13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 COL2A1P02458 1487 aaPredicted RBP13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 PSME4Q14997 1843 aa13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 NFKBIEO00221 500 aa13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 CYTH3O43739 400 aa13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 SNHG28P0DPA3 235 aa13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 ATP2B1P20020 1258 aa13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 RASSF7Q02833 373 aa13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 SPECC1Q5M775 1068 aa13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 KIAA0825Q8IV33 1275 aa13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 PYM1Q9BRP8 204 aaKnown RBP13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 CSRNP2Q9H175 543 aa13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 HSD3B7Q9H2F3 369 aa13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 BARHL2Q9NY43 387 aa13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 SERTAD1Q9UHV2 236 aa13.13□□□□□ -0.31
PRPF40B-203ENST00000508736 hCG_1984214I3L0E3 225 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 PPIP5K2O43314 1243 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 ACTN4O43707 911 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 ATP1A3P13637 1013 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 SHMT1P34896 483 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 MORC3Q14149 939 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 SLC35G1Q2M3R5 365 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 EARS2Q5JPH6 523 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 ARMCX5Q6P1M9 558 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 BLIDQ8IZY5 108 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 ZNF713Q8N859 430 aaPredicted RBP13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 KIF18AQ8NI77 898 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 CCDC12Q8WUD4 166 aaPredicted RBP13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 M0R2N6 131 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 TTLL1O95922 423 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 AKR1B1P15121 316 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 SARSP49591 514 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 GRIN1Q05586 938 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 NFIAQ12857 509 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 ASPRV1Q53RT3 343 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 TTC38Q5R3I4 469 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 FOXP4Q8IVH2 680 aaPredicted RBP13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 VSTM4Q8IW00 320 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 ZNF710Q8N1W2 664 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 ZNF592Q92610 1267 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 RIOX1Q9H6W3 641 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 MYH8P13535 1937 aa13.12□□□□□ -0.31
PRPF40B-203ENST00000508736 USP27XA6NNY8 438 aa13.11□□□□□ -0.31
PRPF40B-203ENST00000508736 ENTPD3O75355 529 aa13.11□□□□□ -0.31
PRPF40B-203ENST00000508736 PDHBP11177 359 aa13.11□□□□□ -0.31
PRPF40B-203ENST00000508736 ATP2C1P98194 919 aaPredicted RBP13.11□□□□□ -0.31
PRPF40B-203ENST00000508736 WWC2Q6AWC2 1192 aa13.11□□□□□ -0.31
PRPF40B-203ENST00000508736 LARGE2Q8N3Y3 721 aa13.11□□□□□ -0.31
PRPF40B-203ENST00000508736 ENOX1Q8TC92 643 aaKnown RBP13.11□□□□□ -0.31
PRPF40B-203ENST00000508736 ZMYND12Q9H0C1 365 aa13.11□□□□□ -0.31
PRPF40B-203ENST00000508736 FANCLQ9NW38 375 aa13.11□□□□□ -0.31
PRPF40B-203ENST00000508736 PI4KBQ9UBF8 816 aa13.11□□□□□ -0.31
PRPF40B-203ENST00000508736 ATRNL1Q5VV63 1379 aa13.11□□□□□ -0.31
PRPF40B-203ENST00000508736 FAM205CA6NFA0 338 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 YDJCA8MPS7 323 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 STXBP3O00186 592 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 FOXN1O15353 648 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 SLFN14P0C7P3 912 aa13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 VEGFAP15692 232 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-203ENST00000508736 ERCC5P28715 1186 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms