RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 RIOX1Q9H6W3 641 aa18.51■□□□□ 0.55
NFKB1-207ENST00000508584 GOPCQ9HD26 462 aa18.51■□□□□ 0.55
NFKB1-207ENST00000508584 ISY1Q9ULR0 285 aaKnown RBP18.51■□□□□ 0.55
NFKB1-207ENST00000508584 KCNJ14Q9UNX9 436 aa18.51■□□□□ 0.55
NFKB1-207ENST00000508584 KIF28PB7ZC32 967 aa18.5■□□□□ 0.55
NFKB1-207ENST00000508584 GNL2Q13823 731 aaKnown RBP18.5■□□□□ 0.55
NFKB1-207ENST00000508584 KCTD1Q719H9 257 aa18.5■□□□□ 0.55
NFKB1-207ENST00000508584 SHISA4Q96DD7 197 aa18.5■□□□□ 0.55
NFKB1-207ENST00000508584 PHF20Q9BVI0 1012 aa18.5■□□□□ 0.55
NFKB1-207ENST00000508584 VAT1LQ9HCJ6 419 aa18.5■□□□□ 0.55
NFKB1-207ENST00000508584 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.5■□□□□ 0.55
NFKB1-207ENST00000508584 SEC63Q9UGP8 760 aaKnown RBP18.5■□□□□ 0.55
NFKB1-207ENST00000508584 SSC5DA1L4H1 1573 aa18.5■□□□□ 0.55
NFKB1-207ENST00000508584 PRPF40AO75400 957 aaKnown RBP18.49■□□□□ 0.55
NFKB1-207ENST00000508584 BMP3P12645 472 aa18.49■□□□□ 0.55
NFKB1-207ENST00000508584 INPP5BP32019 993 aa18.49■□□□□ 0.55
NFKB1-207ENST00000508584 CSPP1Q1MSJ5 1256 aa18.49■□□□□ 0.55
NFKB1-207ENST00000508584 TTBK2Q6IQ55 1244 aa18.49■□□□□ 0.55
NFKB1-207ENST00000508584 DIS3L2Q8IYB7 885 aaKnown RBP18.49■□□□□ 0.55
NFKB1-207ENST00000508584 SCYL3Q8IZE3 742 aa18.49■□□□□ 0.55
NFKB1-207ENST00000508584 TMEM87AQ8NBN3 555 aa18.49■□□□□ 0.55
NFKB1-207ENST00000508584 CCDC102AQ96A19 550 aa18.49■□□□□ 0.55
NFKB1-207ENST00000508584 ZNF396Q96N95 335 aaPredicted RBP18.49■□□□□ 0.55
NFKB1-207ENST00000508584 PIGSQ96S52 555 aa18.49■□□□□ 0.55
NFKB1-207ENST00000508584 WRNIP1Q96S55 665 aa18.49■□□□□ 0.55
NFKB1-207ENST00000508584 SH3GLB2Q9NR46 395 aa18.49■□□□□ 0.55
NFKB1-207ENST00000508584 LMBRD1Q9NUN5 540 aa18.49■□□□□ 0.55
NFKB1-207ENST00000508584 FIBPO43427 364 aa18.48■□□□□ 0.55
NFKB1-207ENST00000508584 U2AF2P26368 475 aaKnown RBP eCLIP18.48■□□□□ 0.55
NFKB1-207ENST00000508584 ATL3Q6DD88 541 aa18.48■□□□□ 0.55
NFKB1-207ENST00000508584 HEATR3Q7Z4Q2 680 aa18.48■□□□□ 0.55
NFKB1-207ENST00000508584 CCDC84Q86UT8 332 aaPredicted RBP18.48■□□□□ 0.55
NFKB1-207ENST00000508584 HOMER1Q86YM7 354 aa18.48■□□□□ 0.55
NFKB1-207ENST00000508584 ADGRF4Q8IZF3 695 aa18.48■□□□□ 0.55
NFKB1-207ENST00000508584 FAM177A1Q8N128 213 aaPredicted RBP18.48■□□□□ 0.55
NFKB1-207ENST00000508584 GPKOWQ92917 476 aaPredicted RBP eCLIP18.48■□□□□ 0.55
NFKB1-207ENST00000508584 FOXP1Q9H334 677 aaPredicted RBP18.48■□□□□ 0.55
NFKB1-207ENST00000508584 VCPKMTQ9H867 229 aa18.48■□□□□ 0.55
NFKB1-207ENST00000508584 GDPD2Q9HCC8 539 aa18.48■□□□□ 0.55
NFKB1-207ENST00000508584 PICK1Q9NRD5 415 aa18.48■□□□□ 0.55
NFKB1-207ENST00000508584 KRT2P35908 639 aa18.47■□□□□ 0.55
NFKB1-207ENST00000508584 SLC16A2P36021 539 aa18.47■□□□□ 0.55
NFKB1-207ENST00000508584 ZNF157P51786 506 aaPredicted RBP18.47■□□□□ 0.55
NFKB1-207ENST00000508584 NLRP5P59047 1200 aa18.47■□□□□ 0.55
NFKB1-207ENST00000508584 WWC2Q6AWC2 1192 aa18.47■□□□□ 0.55
NFKB1-207ENST00000508584 CCDC148Q8NFR7 591 aa18.47■□□□□ 0.55
NFKB1-207ENST00000508584 CDCA5Q96FF9 252 aa18.47■□□□□ 0.55
NFKB1-207ENST00000508584 NUP88Q99567 741 aaPredicted RBP18.47■□□□□ 0.55
NFKB1-207ENST00000508584 FEZ1Q99689 392 aa18.47■□□□□ 0.55
NFKB1-207ENST00000508584 JMJD4Q9H9V9 463 aa18.47■□□□□ 0.55
NFKB1-207ENST00000508584 BRMS1Q9HCU9 246 aa18.47■□□□□ 0.55
NFKB1-207ENST00000508584 BARHL2Q9NY43 387 aa18.47■□□□□ 0.55
NFKB1-207ENST00000508584 TFIP11Q9UBB9 837 aaKnown RBP18.47■□□□□ 0.55
NFKB1-207ENST00000508584 CFAP45Q9UL16 551 aa18.47■□□□□ 0.55
NFKB1-207ENST00000508584 FAM155AB1AL88 458 aaPredicted RBP18.46■□□□□ 0.55
NFKB1-207ENST00000508584 BTBD18B2RXH4 712 aa18.46■□□□□ 0.55
NFKB1-207ENST00000508584 hCG_1984214I3L0E3 225 aa18.46■□□□□ 0.55
NFKB1-207ENST00000508584 STXBP3O00186 592 aa18.46■□□□□ 0.55
NFKB1-207ENST00000508584 CALML3P27482 149 aa18.46■□□□□ 0.55
NFKB1-207ENST00000508584 KIAA1755Q5JYT7 1200 aa18.46■□□□□ 0.55
NFKB1-207ENST00000508584 NOL9Q5SY16 702 aaKnown RBP18.46■□□□□ 0.55
NFKB1-207ENST00000508584 MYSM1Q5VVJ2 828 aa18.46■□□□□ 0.55
NFKB1-207ENST00000508584 NOSTRINQ8IVI9 506 aa18.46■□□□□ 0.55
NFKB1-207ENST00000508584 SPICE1Q8N0Z3 855 aa18.46■□□□□ 0.55
NFKB1-207ENST00000508584 ZNF713Q8N859 430 aaPredicted RBP18.46■□□□□ 0.55
NFKB1-207ENST00000508584 ZKSCAN4Q969J2 545 aaPredicted RBP18.46■□□□□ 0.55
NFKB1-207ENST00000508584 ZIC5Q96T25 663 aa18.46■□□□□ 0.55
NFKB1-207ENST00000508584 SCAND2PQ9GZW5 306 aaPredicted RBP18.46■□□□□ 0.55
NFKB1-207ENST00000508584 FZD1Q9UP38 647 aa18.46■□□□□ 0.55
NFKB1-207ENST00000508584 MYH4Q9Y623 1939 aa18.46■□□□□ 0.55
NFKB1-207ENST00000508584 PNMA6FA0A0J9YX94 578 aa18.45■□□□□ 0.54
NFKB1-207ENST00000508584 USP17L10C9JJH3 530 aa18.45■□□□□ 0.54
NFKB1-207ENST00000508584 TMEM232C9JQI7 657 aa18.45■□□□□ 0.54
NFKB1-207ENST00000508584 TRAK2O60296 914 aa18.45■□□□□ 0.54
NFKB1-207ENST00000508584 USP2O75604 605 aaPredicted RBP18.45■□□□□ 0.54
NFKB1-207ENST00000508584 ZYXQ15942 572 aaKnown RBP18.45■□□□□ 0.54
NFKB1-207ENST00000508584 SKOR2Q2VWA4 1001 aaPredicted RBP18.45■□□□□ 0.54
NFKB1-207ENST00000508584 BTNL9Q6UXG8 535 aa18.45■□□□□ 0.54
NFKB1-207ENST00000508584 OXER1Q8TDS5 423 aa18.45■□□□□ 0.54
NFKB1-207ENST00000508584 CCDC12Q8WUD4 166 aaPredicted RBP18.45■□□□□ 0.54
NFKB1-207ENST00000508584 MTMR8Q96EF0 704 aa18.45■□□□□ 0.54
NFKB1-207ENST00000508584 WDR18Q9BV38 432 aa18.45■□□□□ 0.54
NFKB1-207ENST00000508584 KIAA1683Q9H0B3 1180 aa18.45■□□□□ 0.54
NFKB1-207ENST00000508584 AS3MTQ9HBK9 375 aa18.45■□□□□ 0.54
NFKB1-207ENST00000508584 CCDC85CA6NKD9 419 aa18.44■□□□□ 0.54
NFKB1-207ENST00000508584 PTPRAP18433 802 aa18.44■□□□□ 0.54
NFKB1-207ENST00000508584 NF2P35240 595 aa18.44■□□□□ 0.54
NFKB1-207ENST00000508584 NAPAP54920 295 aa18.44■□□□□ 0.54
NFKB1-207ENST00000508584 IKQ13123 557 aaPredicted RBP18.44■□□□□ 0.54
NFKB1-207ENST00000508584 PRKG1Q13976 671 aa18.44■□□□□ 0.54
NFKB1-207ENST00000508584 NPY5RQ15761 445 aa18.44■□□□□ 0.54
NFKB1-207ENST00000508584 FAM83BQ5T0W9 1011 aa18.44■□□□□ 0.54
NFKB1-207ENST00000508584 SYDE2Q5VT97 1194 aa18.44■□□□□ 0.54
NFKB1-207ENST00000508584 GALNT17Q6IS24 598 aa18.44■□□□□ 0.54
NFKB1-207ENST00000508584 TYW1BQ6NUM6 668 aa18.44■□□□□ 0.54
NFKB1-207ENST00000508584 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.44■□□□□ 0.54
NFKB1-207ENST00000508584 LEO1Q8WVC0 666 aaPredicted RBP18.44■□□□□ 0.54
NFKB1-207ENST00000508584 SPATA32Q96LK8 384 aa18.44■□□□□ 0.54
NFKB1-207ENST00000508584 USP28Q96RU2 1077 aa18.44■□□□□ 0.54
NFKB1-207ENST00000508584 ANP32EQ9BTT0 268 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms