RNA–Protein interactions for RNA: ENST00000508075.1

NEDD4-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-207ENST00000508075 NMIQ13287 307 aaPredicted RBP17.15■□□□□ 0.34
NEDD4-207ENST00000508075 SLFN13Q68D06 897 aa17.15■□□□□ 0.34
NEDD4-207ENST00000508075 ZNF589Q86UQ0 364 aaPredicted RBP17.15■□□□□ 0.34
NEDD4-207ENST00000508075 RILPL2Q969X0 211 aa17.15■□□□□ 0.34
NEDD4-207ENST00000508075 LRCH3Q96II8 777 aa17.15■□□□□ 0.34
NEDD4-207ENST00000508075 TRIM6-TRIM34B2RNG4 842 aa17.14■□□□□ 0.33
NEDD4-207ENST00000508075 MAGEA10P43363 369 aaPredicted RBP17.14■□□□□ 0.33
NEDD4-207ENST00000508075 HAND2P61296 217 aa17.14■□□□□ 0.33
NEDD4-207ENST00000508075 LRRFIP1Q32MZ4 808 aaKnown RBP17.14■□□□□ 0.33
NEDD4-207ENST00000508075 RRP12Q5JTH9 1297 aaKnown RBP17.14■□□□□ 0.33
NEDD4-207ENST00000508075 OLFML2BQ68BL8 750 aa17.14■□□□□ 0.33
NEDD4-207ENST00000508075 NEDD1Q8NHV4 660 aa17.14■□□□□ 0.33
NEDD4-207ENST00000508075 FERMT2Q96AC1 680 aa17.14■□□□□ 0.33
NEDD4-207ENST00000508075 EVI5LQ96CN4 794 aa17.14■□□□□ 0.33
NEDD4-207ENST00000508075 HOMER2Q9NSB8 354 aa17.14■□□□□ 0.33
NEDD4-207ENST00000508075 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.14■□□□□ 0.33
NEDD4-207ENST00000508075 DDX49Q9Y6V7 483 aaKnown RBP17.14■□□□□ 0.33
NEDD4-207ENST00000508075 TTLL1O95922 423 aa17.13■□□□□ 0.33
NEDD4-207ENST00000508075 IRX5P78411 483 aaPredicted RBP17.13■□□□□ 0.33
NEDD4-207ENST00000508075 MDM2Q00987 491 aaPredicted RBP17.13■□□□□ 0.33
NEDD4-207ENST00000508075 PDE4BQ07343 736 aa17.13■□□□□ 0.33
NEDD4-207ENST00000508075 KCTD2Q14681 263 aa17.13■□□□□ 0.33
NEDD4-207ENST00000508075 KCTD1Q719H9 257 aa17.13■□□□□ 0.33
NEDD4-207ENST00000508075 IL17RBQ9NRM6 502 aa17.13■□□□□ 0.33
NEDD4-207ENST00000508075 TOMM22Q9NS69 142 aa17.13■□□□□ 0.33
NEDD4-207ENST00000508075 TSPY2A6NKD2 308 aa17.12■□□□□ 0.33
NEDD4-207ENST00000508075 TMEM232C9JQI7 657 aa17.12■□□□□ 0.33
NEDD4-207ENST00000508075 RANBP6O60518 1105 aaKnown RBP17.12■□□□□ 0.33
NEDD4-207ENST00000508075 SLC25A27O95847 323 aa17.12■□□□□ 0.33
NEDD4-207ENST00000508075 MCCP23508 829 aa17.12■□□□□ 0.33
NEDD4-207ENST00000508075 ZNF792Q3KQV3 632 aa17.12■□□□□ 0.33
NEDD4-207ENST00000508075 GDF15Q99988 308 aa17.12■□□□□ 0.33
NEDD4-207ENST00000508075 STX8Q9UNK0 236 aa17.12■□□□□ 0.33
NEDD4-207ENST00000508075 PGK1P00558 417 aa17.11■□□□□ 0.33
NEDD4-207ENST00000508075 BMP3P12645 472 aa17.11■□□□□ 0.33
NEDD4-207ENST00000508075 IKQ13123 557 aaPredicted RBP17.11■□□□□ 0.33
NEDD4-207ENST00000508075 MKL1Q969V6 931 aa17.11■□□□□ 0.33
NEDD4-207ENST00000508075 ATP11BQ9Y2G3 1177 aa17.11■□□□□ 0.33
NEDD4-207ENST00000508075 CTDP1Q9Y5B0 961 aaPredicted RBP17.11■□□□□ 0.33
NEDD4-207ENST00000508075 SUPT16HQ9Y5B9 1047 aaKnown RBP17.11■□□□□ 0.33
NEDD4-207ENST00000508075 SEPT4O43236 478 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 ZBED4O75132 1171 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 SLC3A2P08195 630 aaKnown RBP17.1■□□□□ 0.33
NEDD4-207ENST00000508075 ADCYAP1R1P41586 468 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 RTP1P59025 263 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 CCDC174Q6PII3 467 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 PLEKHM2Q8IWE5 1019 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 SMC5Q8IY18 1101 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 ABRAQ8N0Z2 381 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 PRPF38AQ8NAV1 312 aaKnown RBP17.1■□□□□ 0.33
NEDD4-207ENST00000508075 DDX11Q96FC9 970 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 AGBL1Q96MI9 1066 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 TINF2Q9BSI4 451 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 TEX13BQ9BXU2 312 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 ZNF287Q9HBT7 754 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 SLC5A4Q9NY91 659 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 PLIN4Q96Q06 1357 aa17.1■□□□□ 0.33
NEDD4-207ENST00000508075 FGAP02671 866 aa17.09■□□□□ 0.33
NEDD4-207ENST00000508075 CAPN2P17655 700 aa17.09■□□□□ 0.33
NEDD4-207ENST00000508075 PTGS1P23219 599 aa17.09■□□□□ 0.33
NEDD4-207ENST00000508075 LRRC41Q15345 812 aa17.09■□□□□ 0.33
NEDD4-207ENST00000508075 MCMDC2Q4G0Z9 681 aa17.09■□□□□ 0.33
NEDD4-207ENST00000508075 TTBK2Q6IQ55 1244 aa17.09■□□□□ 0.33
NEDD4-207ENST00000508075 CHD1LQ86WJ1 897 aa17.09■□□□□ 0.33
NEDD4-207ENST00000508075 GMCL1P1Q8NEA9 526 aa17.09■□□□□ 0.33
NEDD4-207ENST00000508075 FGD4Q96M96 766 aa17.09■□□□□ 0.33
NEDD4-207ENST00000508075 RWDD1Q9H446 243 aaPredicted RBP17.09■□□□□ 0.33
NEDD4-207ENST00000508075 HELLSQ9NRZ9 838 aa17.09■□□□□ 0.33
NEDD4-207ENST00000508075 FEM1BQ9UK73 627 aa17.09■□□□□ 0.33
NEDD4-207ENST00000508075 FRMPD2Q68DX3 1309 aaPredicted RBP17.09■□□□□ 0.33
NEDD4-207ENST00000508075 LTBP2Q14767 1821 aa17.08■□□□□ 0.33
NEDD4-207ENST00000508075 DNM1LO00429 736 aa17.08■□□□□ 0.32
NEDD4-207ENST00000508075 ZNF865P0CJ78 1059 aaPredicted RBP17.08■□□□□ 0.32
NEDD4-207ENST00000508075 HSPD1P10809 573 aaKnown RBP17.08■□□□□ 0.32
NEDD4-207ENST00000508075 SLC16A2P36021 539 aa17.08■□□□□ 0.32
NEDD4-207ENST00000508075 CNTN2Q02246 1040 aa17.08■□□□□ 0.32
NEDD4-207ENST00000508075 TRIM60Q495X7 471 aa17.08■□□□□ 0.32
NEDD4-207ENST00000508075 PURBQ96QR8 312 aaKnown RBP17.08■□□□□ 0.32
NEDD4-207ENST00000508075 UBE2OQ9C0C9 1292 aaKnown RBP17.08■□□□□ 0.32
NEDD4-207ENST00000508075 SLC38A10Q9HBR0 1119 aa17.08■□□□□ 0.32
NEDD4-207ENST00000508075 ZHX1Q9UKY1 873 aaPredicted RBP17.08■□□□□ 0.32
NEDD4-207ENST00000508075 LCTP09848 1927 aa17.08■□□□□ 0.32
NEDD4-207ENST00000508075 MYADML2A6NDP7 307 aa17.07■□□□□ 0.32
NEDD4-207ENST00000508075 KBTBD13C9JR72 458 aa17.07■□□□□ 0.32
NEDD4-207ENST00000508075 MSCO60682 206 aa17.07■□□□□ 0.32
NEDD4-207ENST00000508075 SNAI1O95863 264 aaPredicted RBP17.07■□□□□ 0.32
NEDD4-207ENST00000508075 SDSP20132 328 aa17.07■□□□□ 0.32
NEDD4-207ENST00000508075 SLC1A4P43007 532 aa17.07■□□□□ 0.32
NEDD4-207ENST00000508075 CCDC96Q2M329 555 aa17.07■□□□□ 0.32
NEDD4-207ENST00000508075 TBC1D10CQ8IV04 446 aa17.07■□□□□ 0.32
NEDD4-207ENST00000508075 ZKSCAN3Q9BRR0 538 aa17.07■□□□□ 0.32
NEDD4-207ENST00000508075 GPCPD1Q9NPB8 672 aa17.07■□□□□ 0.32
NEDD4-207ENST00000508075 XPNPEP3Q9NQH7 507 aa17.07■□□□□ 0.32
NEDD4-207ENST00000508075 PRDM5Q9NQX1 630 aaPredicted RBP17.07■□□□□ 0.32
NEDD4-207ENST00000508075 ZNF536O15090 1300 aa17.06■□□□□ 0.32
NEDD4-207ENST00000508075 CCDC171Q6TFL3 1326 aa17.06■□□□□ 0.32
NEDD4-207ENST00000508075 ADCY6O43306 1168 aa17.06■□□□□ 0.32
NEDD4-207ENST00000508075 ALAS1P13196 640 aa17.06■□□□□ 0.32
NEDD4-207ENST00000508075 NUCB1Q02818 461 aa17.06■□□□□ 0.32
NEDD4-207ENST00000508075 MUM1L1Q5H9M0 696 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms