RNA–Protein interactions for RNA: ENST00000507968.1

SSBP2-209, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-209ENST00000507968 KIF3CO14782 793 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 ZBTB5O15062 677 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 DTNBO60941 627 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 TOMM70O94826 608 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 CALML3P27482 149 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 SLC16A2P36021 539 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 ZYXQ15942 572 aaKnown RBP12.43□□□□□ -0.42
SSBP2-209ENST00000507968 SLC35G1Q2M3R5 365 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 CST9Q5W186 159 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 KRT40Q6A162 431 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 FASTKD5Q7L8L6 764 aaKnown RBP12.43□□□□□ -0.42
SSBP2-209ENST00000507968 PIGSQ96S52 555 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 NUP88Q99567 741 aaPredicted RBP12.43□□□□□ -0.42
SSBP2-209ENST00000507968 BARHL2Q9NY43 387 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 HOXC10Q9NYD6 342 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 KCNH4Q9UQ05 1017 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 ZDHHC9Q9Y397 364 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 SIPA1L1O43166 1804 aa12.43□□□□□ -0.42
SSBP2-209ENST00000507968 USP17L15C9J2P7 530 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 USP17L13C9JLJ4 530 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 USP17L11C9JVI0 530 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 USP17L18D6R9N7 530 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 USP17L22D6RA61 530 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 USP17L17D6RBQ6 530 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 USP17L19D6RCP7 530 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 USP17L20D6RJB6 530 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 FMR1Q06787 632 aaKnown RBP eCLIP12.42□□□□□ -0.42
SSBP2-209ENST00000507968 USP17L24Q0WX57 530 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 COG2Q14746 738 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 TEX2Q8IWB9 1127 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 PROCA1Q8NCQ7 364 aaPredicted RBP12.42□□□□□ -0.42
SSBP2-209ENST00000507968 OPTNQ96CV9 577 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 CLMNQ96JQ2 1002 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 GLT8D2Q9H1C3 349 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 BRMS1Q9HCU9 246 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 PRR12Q9ULL5 1215 aa12.42□□□□□ -0.42
SSBP2-209ENST00000507968 A0A0G2JLL6 359 aaPredicted RBP12.41□□□□□ -0.42
SSBP2-209ENST00000507968 hCG_1642624A0A1W2PR95 340 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 IRF6O14896 467 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 ZBED4O75132 1171 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 F13A1P00488 732 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 MMP1P03956 469 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 VCAM1P19320 739 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 GNA11P29992 359 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 HMGCS2P54868 508 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 NLRP5P59047 1200 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 FSTL1Q12841 308 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 PABPC4Q13310 644 aaKnown RBP eCLIP12.41□□□□□ -0.42
SSBP2-209ENST00000507968 SNAPC2Q13487 334 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 PKP1Q13835 747 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 ATL3Q6DD88 541 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 CATSPERGQ6ZRH7 1159 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 CLEC17AQ6ZS10 378 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 RASGRP2Q7LDG7 609 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 PRRT2Q7Z6L0 340 aaPredicted RBP12.41□□□□□ -0.42
SSBP2-209ENST00000507968 HOMER1Q86YM7 354 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 CCDC148Q8NFR7 591 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 PIBF1Q8WXW3 757 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 TNPO1Q92973 898 aaKnown RBP12.41□□□□□ -0.42
SSBP2-209ENST00000507968 OTUD5Q96G74 571 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 AIFM3Q96NN9 605 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 SLF1Q9BQI6 1058 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 PHF20Q9BVI0 1012 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 FOXP1Q9H334 677 aaPredicted RBP12.41□□□□□ -0.42
SSBP2-209ENST00000507968 CPVLQ9H3G5 476 aa12.41□□□□□ -0.42
SSBP2-209ENST00000507968 RPAP3Q9H6T3 665 aaPredicted RBP12.41□□□□□ -0.42
SSBP2-209ENST00000507968 MYPNQ86TC9 1320 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 U2AF2P26368 475 aaKnown RBP eCLIP12.4□□□□□ -0.42
SSBP2-209ENST00000507968 HOXA7P31268 230 aaPredicted RBP12.4□□□□□ -0.42
SSBP2-209ENST00000507968 GTF2A2P52657 109 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 GUCY1B3Q02153 619 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 GNL2Q13823 731 aaKnown RBP12.4□□□□□ -0.42
SSBP2-209ENST00000507968 CDC37Q16543 378 aaPredicted RBP12.4□□□□□ -0.42
SSBP2-209ENST00000507968 MCTP1Q6DN14 999 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 OTUD7BQ6GQQ9 843 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 PPP1R18Q6NYC8 613 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 HEATR3Q7Z4Q2 680 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 BRAPQ7Z569 592 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 FBXO11Q86XK2 927 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 BICD2Q8TD16 824 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 KIFC2Q96AC6 838 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 AMNQ9BXJ7 453 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 RANBP17Q9H2T7 1088 aaKnown RBP12.4□□□□□ -0.42
SSBP2-209ENST00000507968 C6orf50Q9HD87 102 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 VPS54Q9P1Q0 977 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.4□□□□□ -0.42
SSBP2-209ENST00000507968 PPP1R9AQ9ULJ8 1098 aa12.4□□□□□ -0.42
SSBP2-209ENST00000507968 CTDP1Q9Y5B0 961 aaPredicted RBP12.4□□□□□ -0.42
SSBP2-209ENST00000507968 PASKQ96RG2 1323 aa12.39□□□□□ -0.43
SSBP2-209ENST00000507968 GREB1LQ9C091 1923 aaPredicted RBP12.39□□□□□ -0.43
SSBP2-209ENST00000507968 ESYT2A0FGR8 921 aa12.39□□□□□ -0.43
SSBP2-209ENST00000507968 SMCO2A6NFE2 343 aa12.39□□□□□ -0.43
SSBP2-209ENST00000507968 STXBP3O00186 592 aa12.39□□□□□ -0.43
SSBP2-209ENST00000507968 FLOT1O75955 427 aa12.39□□□□□ -0.43
SSBP2-209ENST00000507968 ZBTB48P10074 688 aaPredicted RBP12.39□□□□□ -0.43
SSBP2-209ENST00000507968 CETPP11597 493 aa12.39□□□□□ -0.43
SSBP2-209ENST00000507968 DSG3P32926 999 aa12.39□□□□□ -0.43
SSBP2-209ENST00000507968 KRT2P35908 639 aa12.39□□□□□ -0.43
SSBP2-209ENST00000507968 MRPL12P52815 198 aaKnown RBP12.39□□□□□ -0.43
SSBP2-209ENST00000507968 NAPAP54920 295 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms