RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 CPXCR1Q8N123 301 aa24.74■■□□□ 1.55
CLDND1-216ENST00000507944 TINF2Q9BSI4 451 aa24.74■■□□□ 1.55
CLDND1-216ENST00000507944 HELLSQ9NRZ9 838 aa24.74■■□□□ 1.55
CLDND1-216ENST00000507944 ATP2A1O14983 1001 aa24.73■■□□□ 1.55
CLDND1-216ENST00000507944 MAGEA10P43363 369 aaPredicted RBP24.73■■□□□ 1.55
CLDND1-216ENST00000507944 SLC4A3P48751 1232 aa24.73■■□□□ 1.55
CLDND1-216ENST00000507944 CTDSPL2Q05D32 466 aa24.73■■□□□ 1.55
CLDND1-216ENST00000507944 NRBP1Q9UHY1 535 aa24.73■■□□□ 1.55
CLDND1-216ENST00000507944 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.73■■□□□ 1.55
CLDND1-216ENST00000507944 RIPK3Q9Y572 518 aa24.73■■□□□ 1.55
CLDND1-216ENST00000507944 SZT2Q5T011 3432 aa24.72■■□□□ 1.55
CLDND1-216ENST00000507944 BMP3P12645 472 aa24.72■■□□□ 1.55
CLDND1-216ENST00000507944 ATN1P54259 1190 aaPredicted RBP24.72■■□□□ 1.55
CLDND1-216ENST00000507944 VPS53Q5VIR6 699 aa24.72■■□□□ 1.55
CLDND1-216ENST00000507944 LNPKQ9C0E8 428 aa24.72■■□□□ 1.55
CLDND1-216ENST00000507944 RWDD1Q9H446 243 aaPredicted RBP24.72■■□□□ 1.55
CLDND1-216ENST00000507944 SLC38A10Q9HBR0 1119 aa24.72■■□□□ 1.55
CLDND1-216ENST00000507944 INCENPQ9NQS7 918 aa24.72■■□□□ 1.55
CLDND1-216ENST00000507944 KBTBD13C9JR72 458 aa24.71■■□□□ 1.55
CLDND1-216ENST00000507944 MYCNP04198 464 aaPredicted RBP24.71■■□□□ 1.55
CLDND1-216ENST00000507944 PPP4R3BQ5MIZ7 849 aa24.71■■□□□ 1.55
CLDND1-216ENST00000507944 DDX11Q96FC9 970 aa24.71■■□□□ 1.55
CLDND1-216ENST00000507944 RAVER2Q9HCJ3 691 aaKnown RBP24.71■■□□□ 1.55
CLDND1-216ENST00000507944 TSPY2A6NKD2 308 aa24.7■■□□□ 1.54
CLDND1-216ENST00000507944 ALX1Q15699 326 aa24.7■■□□□ 1.54
CLDND1-216ENST00000507944 TICAM2Q86XR7 235 aa24.7■■□□□ 1.54
CLDND1-216ENST00000507944 FAM227BQ96M60 508 aa24.7■■□□□ 1.54
CLDND1-216ENST00000507944 ANAPC4Q9UJX5 808 aa24.7■■□□□ 1.54
CLDND1-216ENST00000507944 TMEM232C9JQI7 657 aa24.69■■□□□ 1.54
CLDND1-216ENST00000507944 MCMDC2Q4G0Z9 681 aa24.69■■□□□ 1.54
CLDND1-216ENST00000507944 B4GALNT3Q6L9W6 998 aa24.69■■□□□ 1.54
CLDND1-216ENST00000507944 SMC5Q8IY18 1101 aa24.69■■□□□ 1.54
CLDND1-216ENST00000507944 ISY1Q9ULR0 285 aaKnown RBP24.69■■□□□ 1.54
CLDND1-216ENST00000507944 SOX1O00570 391 aaPredicted RBP24.68■■□□□ 1.54
CLDND1-216ENST00000507944 RARBP10826 455 aa24.68■■□□□ 1.54
CLDND1-216ENST00000507944 TAL1P17542 331 aaPredicted RBP24.68■■□□□ 1.54
CLDND1-216ENST00000507944 OAZ1P54368 228 aa24.68■■□□□ 1.54
CLDND1-216ENST00000507944 LRRC41Q15345 812 aa24.68■■□□□ 1.54
CLDND1-216ENST00000507944 GMCL1Q96IK5 515 aa24.68■■□□□ 1.54
CLDND1-216ENST00000507944 UBE2OQ9C0C9 1292 aaKnown RBP24.68■■□□□ 1.54
CLDND1-216ENST00000507944 IL17RBQ9NRM6 502 aa24.68■■□□□ 1.54
CLDND1-216ENST00000507944 STX8Q9UNK0 236 aa24.68■■□□□ 1.54
CLDND1-216ENST00000507944 TACC3Q9Y6A5 838 aa24.68■■□□□ 1.54
CLDND1-216ENST00000507944 DNAJC25-GNG10A0A024R161 153 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 A0A0D9SFI3 127 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 TRIM6-TRIM34B2RNG4 842 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 RANBP6O60518 1105 aaKnown RBP24.67■■□□□ 1.54
CLDND1-216ENST00000507944 NMT2O60551 498 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 ZNF865P0CJ78 1059 aaPredicted RBP24.67■■□□□ 1.54
CLDND1-216ENST00000507944 FDX1P10109 184 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 MCCP23508 829 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 SLC1A4P43007 532 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 STAT2P52630 851 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 RTP1P59025 263 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 SLC39A5Q6ZMH5 540 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 MSL3Q8N5Y2 521 aaKnown RBP24.67■■□□□ 1.54
CLDND1-216ENST00000507944 CHST13Q8NET6 341 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 CHURC1Q8WUH1 139 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 CHMP4CQ96CF2 233 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 XPNPEP3Q9NQH7 507 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 FBXO40Q9UH90 709 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 CNPY2Q9Y2B0 182 aa24.67■■□□□ 1.54
CLDND1-216ENST00000507944 LAMA3Q16787 3333 aa24.66■■□□□ 1.54
CLDND1-216ENST00000507944 ORC4O43929 436 aa24.66■■□□□ 1.54
CLDND1-216ENST00000507944 FGAP02671 866 aa24.66■■□□□ 1.54
CLDND1-216ENST00000507944 ADCYAP1R1P41586 468 aa24.66■■□□□ 1.54
CLDND1-216ENST00000507944 MDM2Q00987 491 aaPredicted RBP24.66■■□□□ 1.54
CLDND1-216ENST00000507944 NMIQ13287 307 aaPredicted RBP24.66■■□□□ 1.54
CLDND1-216ENST00000507944 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.66■■□□□ 1.54
CLDND1-216ENST00000507944 FAM160B2Q86V87 743 aa24.66■■□□□ 1.54
CLDND1-216ENST00000507944 ANKRD35Q8N283 1001 aa24.66■■□□□ 1.54
CLDND1-216ENST00000507944 STAG1Q8WVM7 1258 aa24.66■■□□□ 1.54
CLDND1-216ENST00000507944 RILPL2Q969X0 211 aa24.66■■□□□ 1.54
CLDND1-216ENST00000507944 LRCH3Q96II8 777 aa24.66■■□□□ 1.54
CLDND1-216ENST00000507944 IGHDP01880 384 aa24.65■■□□□ 1.54
CLDND1-216ENST00000507944 FGRP09769 529 aa24.65■■□□□ 1.54
CLDND1-216ENST00000507944 IKQ13123 557 aaPredicted RBP24.65■■□□□ 1.54
CLDND1-216ENST00000507944 MAMDC4Q6UXC1 1216 aa24.65■■□□□ 1.54
CLDND1-216ENST00000507944 TDHQ8IZJ6 230 aa24.65■■□□□ 1.54
CLDND1-216ENST00000507944 ATP11BQ9Y2G3 1177 aa24.65■■□□□ 1.54
CLDND1-216ENST00000507944 SYNGAP1Q96PV0 1343 aa24.64■■□□□ 1.54
CLDND1-216ENST00000507944 SNAI1O95863 264 aaPredicted RBP24.64■■□□□ 1.54
CLDND1-216ENST00000507944 HSPD1P10809 573 aaKnown RBP24.64■■□□□ 1.54
CLDND1-216ENST00000507944 AKR1A1P14550 325 aa24.64■■□□□ 1.54
CLDND1-216ENST00000507944 RCSD1Q6JBY9 416 aa24.64■■□□□ 1.54
CLDND1-216ENST00000507944 ZNF467Q7Z7K2 595 aaPredicted RBP24.64■■□□□ 1.54
CLDND1-216ENST00000507944 CHD1LQ86WJ1 897 aa24.64■■□□□ 1.54
CLDND1-216ENST00000507944 EXOC6Q8TAG9 804 aa24.64■■□□□ 1.54
CLDND1-216ENST00000507944 FERMT2Q96AC1 680 aa24.64■■□□□ 1.54
CLDND1-216ENST00000507944 TOMM22Q9NS69 142 aa24.64■■□□□ 1.54
CLDND1-216ENST00000507944 PRKAG2Q9UGJ0 569 aa24.64■■□□□ 1.54
CLDND1-216ENST00000507944 MCM3APO60318 1980 aa24.63■■□□□ 1.53
CLDND1-216ENST00000507944 PLA2G6O60733 806 aa24.63■■□□□ 1.53
CLDND1-216ENST00000507944 PGK1P00558 417 aa24.63■■□□□ 1.53
CLDND1-216ENST00000507944 KCTD1Q719H9 257 aa24.63■■□□□ 1.53
CLDND1-216ENST00000507944 RNF180Q86T96 592 aa24.63■■□□□ 1.53
CLDND1-216ENST00000507944 ZNF589Q86UQ0 364 aaPredicted RBP24.63■■□□□ 1.53
CLDND1-216ENST00000507944 PLEKHM2Q8IWE5 1019 aa24.63■■□□□ 1.53
CLDND1-216ENST00000507944 LBHD1Q9BQE6 289 aaPredicted RBP24.63■■□□□ 1.53
CLDND1-216ENST00000507944 HOMER2Q9NSB8 354 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms