RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 PRKAR2AP13861 404 aaKnown RBP16.67■□□□□ 0.26
CCHCR1-222ENST00000507459 GJA8P48165 433 aa16.67■□□□□ 0.26
CCHCR1-222ENST00000507459 CCDC96Q2M329 555 aa16.67■□□□□ 0.26
CCHCR1-222ENST00000507459 SNRNP48Q6IEG0 339 aaKnown RBP16.67■□□□□ 0.26
CCHCR1-222ENST00000507459 NPLOC4Q8TAT6 608 aa16.67■□□□□ 0.26
CCHCR1-222ENST00000507459 SHISA4Q96DD7 197 aa16.67■□□□□ 0.26
CCHCR1-222ENST00000507459 GMCL1Q96IK5 515 aa16.67■□□□□ 0.26
CCHCR1-222ENST00000507459 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCHCR1-222ENST00000507459 RAVER2Q9HCJ3 691 aaKnown RBP16.67■□□□□ 0.26
CCHCR1-222ENST00000507459 HMX1Q9NP08 348 aaPredicted RBP16.67■□□□□ 0.26
CCHCR1-222ENST00000507459 ZNF214Q9UL59 606 aaPredicted RBP16.67■□□□□ 0.26
CCHCR1-222ENST00000507459 RPTORQ8N122 1335 aa16.67■□□□□ 0.26
CCHCR1-222ENST00000507459 SGPL1O95470 568 aa16.66■□□□□ 0.26
CCHCR1-222ENST00000507459 TFRCP02786 760 aaKnown RBP16.66■□□□□ 0.26
CCHCR1-222ENST00000507459 FCER1AP12319 257 aa16.66■□□□□ 0.26
CCHCR1-222ENST00000507459 NOVP48745 357 aa16.66■□□□□ 0.26
CCHCR1-222ENST00000507459 STAT2P52630 851 aa16.66■□□□□ 0.26
CCHCR1-222ENST00000507459 RCSD1Q6JBY9 416 aa16.66■□□□□ 0.26
CCHCR1-222ENST00000507459 CHURC1Q8WUH1 139 aa16.66■□□□□ 0.26
CCHCR1-222ENST00000507459 MMP19Q99542 508 aa16.66■□□□□ 0.26
CCHCR1-222ENST00000507459 TEX13BQ9BXU2 312 aa16.66■□□□□ 0.26
CCHCR1-222ENST00000507459 FLRT1Q9NZU1 646 aa16.66■□□□□ 0.26
CCHCR1-222ENST00000507459 COBLO75128 1261 aa16.65■□□□□ 0.26
CCHCR1-222ENST00000507459 HOXC6P09630 235 aa16.65■□□□□ 0.26
CCHCR1-222ENST00000507459 CACNB2Q08289 660 aaPredicted RBP16.65■□□□□ 0.26
CCHCR1-222ENST00000507459 MFSD14CQ5VZR4 134 aa16.65■□□□□ 0.26
CCHCR1-222ENST00000507459 FAM160B2Q86V87 743 aa16.65■□□□□ 0.26
CCHCR1-222ENST00000507459 IQCA1Q86XH1 822 aa16.65■□□□□ 0.26
CCHCR1-222ENST00000507459 TTC14Q96N46 770 aa16.65■□□□□ 0.26
CCHCR1-222ENST00000507459 KRT23Q9C075 422 aa16.65■□□□□ 0.26
CCHCR1-222ENST00000507459 SLC38A10Q9HBR0 1119 aa16.65■□□□□ 0.26
CCHCR1-222ENST00000507459 PAK6Q9NQU5 681 aaPredicted RBP16.65■□□□□ 0.26
CCHCR1-222ENST00000507459 ZSWIM5Q9P217 1185 aa16.65■□□□□ 0.26
CCHCR1-222ENST00000507459 RIPK3Q9Y572 518 aa16.65■□□□□ 0.26
CCHCR1-222ENST00000507459 LAMA4Q16363 1823 aa16.64■□□□□ 0.25
CCHCR1-222ENST00000507459 PGK2P07205 417 aa16.64■□□□□ 0.25
CCHCR1-222ENST00000507459 CYP2C19P33261 490 aa16.64■□□□□ 0.25
CCHCR1-222ENST00000507459 COPB2P35606 906 aa16.64■□□□□ 0.25
CCHCR1-222ENST00000507459 SNAP25P60880 206 aa16.64■□□□□ 0.25
CCHCR1-222ENST00000507459 KCTD2Q14681 263 aa16.64■□□□□ 0.25
CCHCR1-222ENST00000507459 MAP3K21Q5TCX8 1036 aa16.64■□□□□ 0.25
CCHCR1-222ENST00000507459 TTBK2Q6IQ55 1244 aa16.64■□□□□ 0.25
CCHCR1-222ENST00000507459 ABRAQ8N0Z2 381 aa16.64■□□□□ 0.25
CCHCR1-222ENST00000507459 DCAF4Q8WV16 495 aa16.64■□□□□ 0.25
CCHCR1-222ENST00000507459 GPCPD1Q9NPB8 672 aa16.64■□□□□ 0.25
CCHCR1-222ENST00000507459 SLC5A4Q9NY91 659 aa16.64■□□□□ 0.25
CCHCR1-222ENST00000507459 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
CCHCR1-222ENST00000507459 FRMPD2Q68DX3 1309 aaPredicted RBP16.64■□□□□ 0.25
CCHCR1-222ENST00000507459 CCND3P30281 292 aaPredicted RBP16.63■□□□□ 0.25
CCHCR1-222ENST00000507459 SLC16A2P36021 539 aa16.63■□□□□ 0.25
CCHCR1-222ENST00000507459 BMP2KLQ5H9B9 411 aa16.63■□□□□ 0.25
CCHCR1-222ENST00000507459 KIAA1211Q6ZU35 1233 aa16.63■□□□□ 0.25
CCHCR1-222ENST00000507459 ZSCAN10Q96SZ4 725 aaPredicted RBP16.63■□□□□ 0.25
CCHCR1-222ENST00000507459 CNNM2Q9H8M5 875 aa16.63■□□□□ 0.25
CCHCR1-222ENST00000507459 PRR12Q9ULL5 1215 aa16.63■□□□□ 0.25
CCHCR1-222ENST00000507459 TNRC18O15417 2968 aaPredicted RBP16.62■□□□□ 0.25
CCHCR1-222ENST00000507459 ATP2A1O14983 1001 aa16.62■□□□□ 0.25
CCHCR1-222ENST00000507459 PLA2G6O60733 806 aa16.62■□□□□ 0.25
CCHCR1-222ENST00000507459 CENPBP07199 599 aaPredicted RBP16.62■□□□□ 0.25
CCHCR1-222ENST00000507459 CYP21A2P08686 494 aa16.62■□□□□ 0.25
CCHCR1-222ENST00000507459 FDX1P10109 184 aa16.62■□□□□ 0.25
CCHCR1-222ENST00000507459 PDHBP11177 359 aa16.62■□□□□ 0.25
CCHCR1-222ENST00000507459 CNGA1P29973 690 aa16.62■□□□□ 0.25
CCHCR1-222ENST00000507459 TRDNQ13061 729 aa16.62■□□□□ 0.25
CCHCR1-222ENST00000507459 CCDC178Q5BJE1 867 aa16.62■□□□□ 0.25
CCHCR1-222ENST00000507459 CCDC174Q6PII3 467 aa16.62■□□□□ 0.25
CCHCR1-222ENST00000507459 DGKHQ86XP1 1220 aa16.62■□□□□ 0.25
CCHCR1-222ENST00000507459 HOMER2Q9NSB8 354 aa16.62■□□□□ 0.25
CCHCR1-222ENST00000507459 PDE4DIPQ5VU43 2346 aa16.62■□□□□ 0.25
CCHCR1-222ENST00000507459 ZNFX1Q9P2E3 1918 aaKnown RBP16.61■□□□□ 0.25
CCHCR1-222ENST00000507459 FARP2O94887 1054 aaPredicted RBP16.61■□□□□ 0.25
CCHCR1-222ENST00000507459 NT5C2P49902 561 aa16.61■□□□□ 0.25
CCHCR1-222ENST00000507459 OAZ1P54368 228 aa16.61■□□□□ 0.25
CCHCR1-222ENST00000507459 MAP4K1Q92918 833 aa16.61■□□□□ 0.25
CCHCR1-222ENST00000507459 DDX11Q96FC9 970 aa16.61■□□□□ 0.25
CCHCR1-222ENST00000507459 MAML3Q96JK9 1138 aa16.61■□□□□ 0.25
CCHCR1-222ENST00000507459 AGBL1Q96MI9 1066 aa16.61■□□□□ 0.25
CCHCR1-222ENST00000507459 ESYT1Q9BSJ8 1104 aa16.61■□□□□ 0.25
CCHCR1-222ENST00000507459 UBAC1Q9BSL1 405 aa16.61■□□□□ 0.25
CCHCR1-222ENST00000507459 CRISPLD2Q9H0B8 497 aa16.61■□□□□ 0.25
CCHCR1-222ENST00000507459 KAT14Q9H8E8 782 aa16.61■□□□□ 0.25
CCHCR1-222ENST00000507459 RBM8AQ9Y5S9 174 aaKnown RBP16.61■□□□□ 0.25
CCHCR1-222ENST00000507459 TAF6LQ9Y6J9 622 aa16.61■□□□□ 0.25
CCHCR1-222ENST00000507459 SYDE2Q5VT97 1194 aa16.6■□□□□ 0.25
CCHCR1-222ENST00000507459 OLFML2BQ68BL8 750 aa16.6■□□□□ 0.25
CCHCR1-222ENST00000507459 CYB5R4Q7L1T6 521 aa16.6■□□□□ 0.25
CCHCR1-222ENST00000507459 ANKRD35Q8N283 1001 aa16.6■□□□□ 0.25
CCHCR1-222ENST00000507459 ENAHQ8N8S7 591 aaPredicted RBP16.6■□□□□ 0.25
CCHCR1-222ENST00000507459 PNMA1Q8ND90 353 aa16.6■□□□□ 0.25
CCHCR1-222ENST00000507459 TNKSO95271 1327 aa16.6■□□□□ 0.25
CCHCR1-222ENST00000507459 ZNF236Q9UL36 1845 aa16.59■□□□□ 0.25
CCHCR1-222ENST00000507459 E7EWF7 191 aa16.59■□□□□ 0.25
CCHCR1-222ENST00000507459 GOLGA8HP0CJ92 632 aa16.59■□□□□ 0.25
CCHCR1-222ENST00000507459 ALAS1P13196 640 aa16.59■□□□□ 0.25
CCHCR1-222ENST00000507459 ZNF543Q08ER8 600 aa16.59■□□□□ 0.25
CCHCR1-222ENST00000507459 ZNF792Q3KQV3 632 aa16.59■□□□□ 0.25
CCHCR1-222ENST00000507459 PRAMEF19Q5SWL8 479 aa16.59■□□□□ 0.25
CCHCR1-222ENST00000507459 BTNL9Q6UXG8 535 aa16.59■□□□□ 0.25
CCHCR1-222ENST00000507459 RALYLQ86SE5 291 aaKnown RBP16.59■□□□□ 0.25
CCHCR1-222ENST00000507459 CHST13Q8NET6 341 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms