RNA–Protein interactions for RNA: ENST00000507395.1

SFXN1-207, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-207ENST00000507395 SLC38A10Q9HBR0 1119 aa21■□□□□ 0.95
SFXN1-207ENST00000507395 RBM27Q9P2N5 1060 aaKnown RBP21■□□□□ 0.95
SFXN1-207ENST00000507395 PLXNA1Q9UIW2 1896 aa21■□□□□ 0.95
SFXN1-207ENST00000507395 ZMYM6O95789 1325 aa21■□□□□ 0.95
SFXN1-207ENST00000507395 ORC4O43929 436 aa20.99■□□□□ 0.95
SFXN1-207ENST00000507395 NMT2O60551 498 aa20.99■□□□□ 0.95
SFXN1-207ENST00000507395 SDSP20132 328 aa20.99■□□□□ 0.95
SFXN1-207ENST00000507395 SLFN13Q68D06 897 aa20.99■□□□□ 0.95
SFXN1-207ENST00000507395 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.99■□□□□ 0.95
SFXN1-207ENST00000507395 MMP19Q99542 508 aa20.99■□□□□ 0.95
SFXN1-207ENST00000507395 TEX13BQ9BXU2 312 aa20.99■□□□□ 0.95
SFXN1-207ENST00000507395 FEM1BQ9UK73 627 aa20.99■□□□□ 0.95
SFXN1-207ENST00000507395 PGK2P07205 417 aa20.98■□□□□ 0.95
SFXN1-207ENST00000507395 PRAMEF19Q5SWL8 479 aa20.98■□□□□ 0.95
SFXN1-207ENST00000507395 RILPL2Q969X0 211 aa20.98■□□□□ 0.95
SFXN1-207ENST00000507395 GMCL1Q96IK5 515 aa20.98■□□□□ 0.95
SFXN1-207ENST00000507395 DIS3Q9Y2L1 958 aaKnown RBP20.98■□□□□ 0.95
SFXN1-207ENST00000507395 DNAJC25-GNG10A0A024R161 153 aa20.97■□□□□ 0.95
SFXN1-207ENST00000507395 TRIM6-TRIM34B2RNG4 842 aa20.97■□□□□ 0.95
SFXN1-207ENST00000507395 MSCO60682 206 aa20.97■□□□□ 0.95
SFXN1-207ENST00000507395 BMP3P12645 472 aa20.97■□□□□ 0.95
SFXN1-207ENST00000507395 COPB2P35606 906 aa20.97■□□□□ 0.95
SFXN1-207ENST00000507395 SNRNP48Q6IEG0 339 aaKnown RBP20.97■□□□□ 0.95
SFXN1-207ENST00000507395 KIFC2Q96AC6 838 aa20.97■□□□□ 0.95
SFXN1-207ENST00000507395 SLC5A4Q9NY91 659 aa20.97■□□□□ 0.95
SFXN1-207ENST00000507395 CCDC171Q6TFL3 1326 aa20.97■□□□□ 0.95
SFXN1-207ENST00000507395 TSPY2A6NKD2 308 aa20.96■□□□□ 0.95
SFXN1-207ENST00000507395 SEPT4O43236 478 aa20.96■□□□□ 0.95
SFXN1-207ENST00000507395 CNGA1P29973 690 aa20.96■□□□□ 0.95
SFXN1-207ENST00000507395 KCTD2Q14681 263 aa20.96■□□□□ 0.95
SFXN1-207ENST00000507395 RASGRP2Q7LDG7 609 aa20.96■□□□□ 0.95
SFXN1-207ENST00000507395 LAMA3Q16787 3333 aa20.96■□□□□ 0.95
SFXN1-207ENST00000507395 PLA2G6O60733 806 aa20.95■□□□□ 0.94
SFXN1-207ENST00000507395 PDE4AP27815 886 aa20.95■□□□□ 0.94
SFXN1-207ENST00000507395 LRRC26Q2I0M4 334 aa20.95■□□□□ 0.94
SFXN1-207ENST00000507395 C7orf61Q8IZ16 206 aa20.95■□□□□ 0.94
SFXN1-207ENST00000507395 TINF2Q9BSI4 451 aa20.95■□□□□ 0.94
SFXN1-207ENST00000507395 RAVER2Q9HCJ3 691 aaKnown RBP20.95■□□□□ 0.94
SFXN1-207ENST00000507395 ZNF536O15090 1300 aa20.95■□□□□ 0.94
SFXN1-207ENST00000507395 TMEM232C9JQI7 657 aa20.94■□□□□ 0.94
SFXN1-207ENST00000507395 RANBP6O60518 1105 aaKnown RBP20.94■□□□□ 0.94
SFXN1-207ENST00000507395 ZBED4O75132 1171 aa20.94■□□□□ 0.94
SFXN1-207ENST00000507395 MCCP23508 829 aa20.94■□□□□ 0.94
SFXN1-207ENST00000507395 OAZ1P54368 228 aa20.94■□□□□ 0.94
SFXN1-207ENST00000507395 CPXCR1Q8N123 301 aa20.94■□□□□ 0.94
SFXN1-207ENST00000507395 FGD4Q96M96 766 aa20.94■□□□□ 0.94
SFXN1-207ENST00000507395 NRBP1Q9UHY1 535 aa20.94■□□□□ 0.94
SFXN1-207ENST00000507395 STX8Q9UNK0 236 aa20.94■□□□□ 0.94
SFXN1-207ENST00000507395 TRIOBPQ9H2D6 2365 aa20.94■□□□□ 0.94
SFXN1-207ENST00000507395 DNM1LO00429 736 aa20.93■□□□□ 0.94
SFXN1-207ENST00000507395 TAL1P17542 331 aaPredicted RBP20.93■□□□□ 0.94
SFXN1-207ENST00000507395 PPP4R3BQ5MIZ7 849 aa20.93■□□□□ 0.94
SFXN1-207ENST00000507395 ANO1Q5XXA6 986 aa20.93■□□□□ 0.94
SFXN1-207ENST00000507395 STAG1Q8WVM7 1258 aa20.93■□□□□ 0.94
SFXN1-207ENST00000507395 GDF15Q99988 308 aa20.93■□□□□ 0.94
SFXN1-207ENST00000507395 TCP11L1Q9NUJ3 509 aa20.93■□□□□ 0.94
SFXN1-207ENST00000507395 SMCHD1A6NHR9 2005 aa20.92■□□□□ 0.94
SFXN1-207ENST00000507395 ZNF865P0CJ78 1059 aaPredicted RBP20.92■□□□□ 0.94
SFXN1-207ENST00000507395 FDX1P10109 184 aa20.92■□□□□ 0.94
SFXN1-207ENST00000507395 SLC1A4P43007 532 aa20.92■□□□□ 0.94
SFXN1-207ENST00000507395 STAT2P52630 851 aa20.92■□□□□ 0.94
SFXN1-207ENST00000507395 HAND2P61296 217 aa20.92■□□□□ 0.94
SFXN1-207ENST00000507395 RCSD1Q6JBY9 416 aa20.92■□□□□ 0.94
SFXN1-207ENST00000507395 MAMDC4Q6UXC1 1216 aa20.92■□□□□ 0.94
SFXN1-207ENST00000507395 KCTD1Q719H9 257 aa20.92■□□□□ 0.94
SFXN1-207ENST00000507395 TBC1D10CQ8IV04 446 aa20.92■□□□□ 0.94
SFXN1-207ENST00000507395 ZMYND8Q9ULU4 1186 aaPredicted RBP20.92■□□□□ 0.94
SFXN1-207ENST00000507395 LAMA4Q16363 1823 aa20.91■□□□□ 0.94
SFXN1-207ENST00000507395 GJC2Q5T442 439 aaPredicted RBP20.91■□□□□ 0.94
SFXN1-207ENST00000507395 FAM160B2Q86V87 743 aa20.91■□□□□ 0.94
SFXN1-207ENST00000507395 CHMP4CQ96CF2 233 aa20.91■□□□□ 0.94
SFXN1-207ENST00000507395 IL25Q9H293 177 aa20.91■□□□□ 0.94
SFXN1-207ENST00000507395 PCDH10Q9P2E7 1040 aa20.91■□□□□ 0.94
SFXN1-207ENST00000507395 SNAI1O95863 264 aaPredicted RBP20.9■□□□□ 0.94
SFXN1-207ENST00000507395 AKNAD1Q5T1N1 836 aa20.9■□□□□ 0.94
SFXN1-207ENST00000507395 CWC27Q6UX04 472 aaKnown RBP20.9■□□□□ 0.94
SFXN1-207ENST00000507395 ZNF467Q7Z7K2 595 aaPredicted RBP20.9■□□□□ 0.94
SFXN1-207ENST00000507395 MSL3Q8N5Y2 521 aaKnown RBP20.9■□□□□ 0.94
SFXN1-207ENST00000507395 CHST13Q8NET6 341 aa20.9■□□□□ 0.94
SFXN1-207ENST00000507395 CHURC1Q8WUH1 139 aa20.9■□□□□ 0.94
SFXN1-207ENST00000507395 AGBL1Q96MI9 1066 aa20.9■□□□□ 0.94
SFXN1-207ENST00000507395 TMEM47Q9BQJ4 181 aa20.9■□□□□ 0.94
SFXN1-207ENST00000507395 SENP6Q9GZR1 1112 aaPredicted RBP20.9■□□□□ 0.94
SFXN1-207ENST00000507395 A0A1W2PPC1 479 aa20.89■□□□□ 0.93
SFXN1-207ENST00000507395 GSPT1P15170 499 aaKnown RBP20.89■□□□□ 0.93
SFXN1-207ENST00000507395 SYN1P17600 705 aa20.89■□□□□ 0.93
SFXN1-207ENST00000507395 BMP8BP34820 402 aa20.89■□□□□ 0.93
SFXN1-207ENST00000507395 IRX6P78412 446 aaPredicted RBP20.89■□□□□ 0.93
SFXN1-207ENST00000507395 PRR12Q9ULL5 1215 aa20.89■□□□□ 0.93
SFXN1-207ENST00000507395 NEDD4P46934 1319 aa20.88■□□□□ 0.93
SFXN1-207ENST00000507395 SYNGAP1Q96PV0 1343 aa20.88■□□□□ 0.93
SFXN1-207ENST00000507395 PCP11498 1178 aaKnown RBP20.88■□□□□ 0.93
SFXN1-207ENST00000507395 MFAP1P55081 439 aaKnown RBP20.88■□□□□ 0.93
SFXN1-207ENST00000507395 LRRC41Q15345 812 aa20.88■□□□□ 0.93
SFXN1-207ENST00000507395 RRP12Q5JTH9 1297 aaKnown RBP20.88■□□□□ 0.93
SFXN1-207ENST00000507395 BTNL9Q6UXG8 535 aa20.88■□□□□ 0.93
SFXN1-207ENST00000507395 ARRDC4Q8NCT1 418 aa20.88■□□□□ 0.93
SFXN1-207ENST00000507395 DCAF4Q8WV16 495 aa20.88■□□□□ 0.93
SFXN1-207ENST00000507395 DDX11Q96FC9 970 aa20.88■□□□□ 0.93
SFXN1-207ENST00000507395 FBXO40Q9UH90 709 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms