RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 STARD7Q9NQZ5 370 aa19.84■□□□□ 0.77
SNF8-205ENST00000507302 TNFRSF10AO00220 468 aa19.83■□□□□ 0.77
SNF8-205ENST00000507302 GOLIM4O00461 696 aa19.83■□□□□ 0.77
SNF8-205ENST00000507302 ATP2A1O14983 1001 aa19.83■□□□□ 0.77
SNF8-205ENST00000507302 DUSP11O75319 330 aaKnown RBP19.83■□□□□ 0.77
SNF8-205ENST00000507302 NKX3-2P78367 333 aa19.83■□□□□ 0.77
SNF8-205ENST00000507302 KCNA10Q16322 511 aa19.83■□□□□ 0.77
SNF8-205ENST00000507302 TMEM240Q5SV17 173 aa19.83■□□□□ 0.77
SNF8-205ENST00000507302 AKNAD1Q5T1N1 836 aa19.83■□□□□ 0.77
SNF8-205ENST00000507302 IL1RAPL2Q9NP60 686 aa19.83■□□□□ 0.77
SNF8-205ENST00000507302 CNPY2Q9Y2B0 182 aa19.83■□□□□ 0.77
SNF8-205ENST00000507302 MCM3APO60318 1980 aa19.83■□□□□ 0.76
SNF8-205ENST00000507302 MROH7Q68CQ1 1323 aa19.82■□□□□ 0.76
SNF8-205ENST00000507302 FTSJ3Q8IY81 847 aaKnown RBP19.82■□□□□ 0.76
SNF8-205ENST00000507302 ATXN2LQ8WWM7 1075 aaKnown RBP19.82■□□□□ 0.76
SNF8-205ENST00000507302 UPF3AQ9H1J1 476 aaKnown RBP19.82■□□□□ 0.76
SNF8-205ENST00000507302 GOPCQ9HD26 462 aa19.82■□□□□ 0.76
SNF8-205ENST00000507302 FAM184BQ9ULE4 1060 aa19.82■□□□□ 0.76
SNF8-205ENST00000507302 REV3LO60673 3130 aa19.81■□□□□ 0.76
SNF8-205ENST00000507302 CYP2D7A0A087X1C5 515 aa19.81■□□□□ 0.76
SNF8-205ENST00000507302 MYADML2A6NDP7 307 aa19.81■□□□□ 0.76
SNF8-205ENST00000507302 USP17L12C9JPN9 530 aa19.81■□□□□ 0.76
SNF8-205ENST00000507302 USP17L21D6R901 530 aa19.81■□□□□ 0.76
SNF8-205ENST00000507302 MBD4O95243 580 aa19.81■□□□□ 0.76
SNF8-205ENST00000507302 TEX13BQ9BXU2 312 aa19.81■□□□□ 0.76
SNF8-205ENST00000507302 PBX4Q9BYU1 374 aa19.81■□□□□ 0.76
SNF8-205ENST00000507302 MYO9BQ13459 2157 aa19.8■□□□□ 0.76
SNF8-205ENST00000507302 GBF1Q92538 1859 aa19.8■□□□□ 0.76
SNF8-205ENST00000507302 ADCY6O43306 1168 aa19.8■□□□□ 0.76
SNF8-205ENST00000507302 PPIGQ13427 754 aaKnown RBP eCLIP19.8■□□□□ 0.765e-7■■□□□ 11.4
SNF8-205ENST00000507302 SLFNL1Q499Z3 407 aa19.8■□□□□ 0.76
SNF8-205ENST00000507302 FAM83BQ5T0W9 1011 aa19.8■□□□□ 0.76
SNF8-205ENST00000507302 FGD4Q96M96 766 aa19.8■□□□□ 0.76
SNF8-205ENST00000507302 RIPK3Q9Y572 518 aa19.8■□□□□ 0.76
SNF8-205ENST00000507302 TRANK1O15050 2925 aa19.8■□□□□ 0.76
SNF8-205ENST00000507302 CTAGE5O15320 804 aa19.79■□□□□ 0.76
SNF8-205ENST00000507302 PBX2P40425 430 aa19.79■□□□□ 0.76
SNF8-205ENST00000507302 GJA9P57773 515 aa19.79■□□□□ 0.76
SNF8-205ENST00000507302 UBE3CQ15386 1083 aa19.79■□□□□ 0.76
SNF8-205ENST00000507302 CTR9Q6PD62 1173 aa19.79■□□□□ 0.76
SNF8-205ENST00000507302 FAM126BQ8IXS8 530 aa19.79■□□□□ 0.76
SNF8-205ENST00000507302 CLASRPQ8N2M8 674 aaKnown RBP19.79■□□□□ 0.76
SNF8-205ENST00000507302 KIF1BPQ96EK5 621 aa19.79■□□□□ 0.76
SNF8-205ENST00000507302 DNAJC2Q99543 621 aaKnown RBP19.79■□□□□ 0.76
SNF8-205ENST00000507302 SLF1Q9BQI6 1058 aa19.79■□□□□ 0.76
SNF8-205ENST00000507302 PAG1Q9NWQ8 432 aa19.79■□□□□ 0.76
SNF8-205ENST00000507302 ARVCFO00192 962 aa19.78■□□□□ 0.76
SNF8-205ENST00000507302 CD4P01730 458 aa19.78■□□□□ 0.76
SNF8-205ENST00000507302 ATP5JP18859 108 aa19.78■□□□□ 0.76
SNF8-205ENST00000507302 COL9A1P20849 921 aa19.78■□□□□ 0.76
SNF8-205ENST00000507302 CCDC174Q6PII3 467 aa19.78■□□□□ 0.76
SNF8-205ENST00000507302 PCSK9Q8NBP7 692 aaKnown RBP19.78■□□□□ 0.76
SNF8-205ENST00000507302 GLT1D1Q96MS3 346 aa19.78■□□□□ 0.76
SNF8-205ENST00000507302 KATNBL1Q9H079 304 aa19.78■□□□□ 0.76
SNF8-205ENST00000507302 NYAP2Q9P242 653 aa19.78■□□□□ 0.76
SNF8-205ENST00000507302 MYH4Q9Y623 1939 aa19.78■□□□□ 0.76
SNF8-205ENST00000507302 ASGR1P07306 291 aa19.77■□□□□ 0.76
SNF8-205ENST00000507302 CSF2RAP15509 400 aa19.77■□□□□ 0.76
SNF8-205ENST00000507302 IRX5P78411 483 aaPredicted RBP19.77■□□□□ 0.76
SNF8-205ENST00000507302 ACVR2BQ13705 512 aa19.77■□□□□ 0.76
SNF8-205ENST00000507302 PSRC1Q6PGN9 363 aaPredicted RBP19.77■□□□□ 0.76
SNF8-205ENST00000507302 SAMD1Q6SPF0 538 aaPredicted RBP19.77■□□□□ 0.76
SNF8-205ENST00000507302 PRPF38AQ8NAV1 312 aaKnown RBP19.77■□□□□ 0.76
SNF8-205ENST00000507302 SLC43A3Q8NBI5 491 aa19.77■□□□□ 0.76
SNF8-205ENST00000507302 ASB2Q96Q27 587 aa19.77■□□□□ 0.76
SNF8-205ENST00000507302 HAUS7Q99871 368 aa19.77■□□□□ 0.76
SNF8-205ENST00000507302 ABHD16BQ9H3Z7 469 aa19.77■□□□□ 0.76
SNF8-205ENST00000507302 XIRP2A4UGR9 3374 aa19.77■□□□□ 0.75
SNF8-205ENST00000507302 A0A0U1RQG5 324 aaPredicted RBP19.76■□□□□ 0.75
SNF8-205ENST00000507302 GRXCR1A8MXD5 290 aa19.76■□□□□ 0.75
SNF8-205ENST00000507302 CHGBP05060 677 aa19.76■□□□□ 0.75
SNF8-205ENST00000507302 ADGRE1Q14246 886 aa19.76■□□□□ 0.75
SNF8-205ENST00000507302 SBK1Q52WX2 424 aa19.76■□□□□ 0.75
SNF8-205ENST00000507302 SNRNP48Q6IEG0 339 aaKnown RBP19.76■□□□□ 0.75
SNF8-205ENST00000507302 ZNF365Q70YC5 407 aa19.76■□□□□ 0.75
SNF8-205ENST00000507302 AMOTL1Q8IY63 956 aa19.76■□□□□ 0.75
SNF8-205ENST00000507302 TMEM199Q8N511 208 aa19.76■□□□□ 0.75
SNF8-205ENST00000507302 HERVK_113Q902F9 699 aa19.76■□□□□ 0.75
SNF8-205ENST00000507302 GAS2L1Q99501 681 aaPredicted RBP19.76■□□□□ 0.75
SNF8-205ENST00000507302 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.76■□□□□ 0.75
SNF8-205ENST00000507302 IGKV6D-41A0A0C4DH26 115 aa19.75■□□□□ 0.75
SNF8-205ENST00000507302 IFIT2P09913 472 aaKnown RBP19.75■□□□□ 0.75
SNF8-205ENST00000507302 RASA1P20936 1047 aa19.75■□□□□ 0.75
SNF8-205ENST00000507302 CCDC144BQ3MJ40 725 aa19.75■□□□□ 0.75
SNF8-205ENST00000507302 SIRT2Q8IXJ6 389 aa19.75■□□□□ 0.75
SNF8-205ENST00000507302 RPAP2Q8IXW5 612 aaPredicted RBP19.75■□□□□ 0.75
SNF8-205ENST00000507302 DDX11Q96FC9 970 aa19.75■□□□□ 0.75
SNF8-205ENST00000507302 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.75■□□□□ 0.75
SNF8-205ENST00000507302 PRDM12Q9H4Q4 367 aa19.75■□□□□ 0.75
SNF8-205ENST00000507302 SLC38A10Q9HBR0 1119 aa19.75■□□□□ 0.75
SNF8-205ENST00000507302 THEGQ9P2T0 379 aa19.75■□□□□ 0.75
SNF8-205ENST00000507302 LRRC37A2A6NM11 1700 aa19.75■□□□□ 0.75
SNF8-205ENST00000507302 F5H6K3 240 aa19.74■□□□□ 0.75
SNF8-205ENST00000507302 NDUFB10O96000 172 aa19.74■□□□□ 0.75
SNF8-205ENST00000507302 C6orf222P0C671 652 aaPredicted RBP19.74■□□□□ 0.75
SNF8-205ENST00000507302 KLRC3Q07444 240 aa19.74■□□□□ 0.75
SNF8-205ENST00000507302 MKL1Q969V6 931 aa19.74■□□□□ 0.75
SNF8-205ENST00000507302 NUP88Q99567 741 aaPredicted RBP19.74■□□□□ 0.75
SNF8-205ENST00000507302 PUS7LQ9H0K6 701 aaKnown RBP19.74■□□□□ 0.75
SNF8-205ENST00000507302 IL23AQ9NPF7 189 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms