RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 SEC62Q99442 399 aaKnown RBP13.58□□□□□ -0.24
SIL1-208ENST00000505945 TEX13BQ9BXU2 312 aa13.58□□□□□ -0.24
SIL1-208ENST00000505945 PHF24Q9UPV7 400 aa13.58□□□□□ -0.24
SIL1-208ENST00000505945 LAMA2P24043 3122 aaKnown RBP13.58□□□□□ -0.24
SIL1-208ENST00000505945 GREB1LQ9C091 1923 aaPredicted RBP13.58□□□□□ -0.24
SIL1-208ENST00000505945 ROBO3Q96MS0 1386 aa13.58□□□□□ -0.24
SIL1-208ENST00000505945 PLXNA1Q9UIW2 1896 aa13.57□□□□□ -0.24
SIL1-208ENST00000505945 TRIM43BA6NCK2 446 aa13.57□□□□□ -0.24
SIL1-208ENST00000505945 TLE2Q04725 743 aa13.57□□□□□ -0.24
SIL1-208ENST00000505945 C1orf53Q5VUE5 145 aa13.57□□□□□ -0.24
SIL1-208ENST00000505945 RNF180Q86T96 592 aa13.57□□□□□ -0.24
SIL1-208ENST00000505945 MKL1Q969V6 931 aa13.57□□□□□ -0.24
SIL1-208ENST00000505945 KIFC2Q96AC6 838 aa13.57□□□□□ -0.24
SIL1-208ENST00000505945 TRIM43Q96BQ3 446 aaPredicted RBP13.57□□□□□ -0.24
SIL1-208ENST00000505945 CEP95Q96GE4 821 aa13.57□□□□□ -0.24
SIL1-208ENST00000505945 FAM161BQ96MY7 647 aa13.57□□□□□ -0.24
SIL1-208ENST00000505945 ZNF287Q9HBT7 754 aa13.57□□□□□ -0.24
SIL1-208ENST00000505945 RAVER2Q9HCJ3 691 aaKnown RBP13.57□□□□□ -0.24
SIL1-208ENST00000505945 PDLIM7Q9NR12 457 aa13.57□□□□□ -0.24
SIL1-208ENST00000505945 MTMR4Q9NYA4 1195 aa13.57□□□□□ -0.24
SIL1-208ENST00000505945 CNPY2Q9Y2B0 182 aa13.57□□□□□ -0.24
SIL1-208ENST00000505945 PCDHB15Q9Y5E8 787 aa13.57□□□□□ -0.24
SIL1-208ENST00000505945 LTBP2Q14767 1821 aa13.56□□□□□ -0.24
SIL1-208ENST00000505945 DNAJC25-GNG10A0A024R161 153 aa13.56□□□□□ -0.24
SIL1-208ENST00000505945 ZBED4O75132 1171 aa13.56□□□□□ -0.24
SIL1-208ENST00000505945 SNAI1O95863 264 aaPredicted RBP13.56□□□□□ -0.24
SIL1-208ENST00000505945 AKR1A1P14550 325 aa13.56□□□□□ -0.24
SIL1-208ENST00000505945 C9orf50Q5SZB4 431 aa13.56□□□□□ -0.24
SIL1-208ENST00000505945 LRRC47Q8N1G4 583 aaKnown RBP13.56□□□□□ -0.24
SIL1-208ENST00000505945 OTUD7AQ8TE49 926 aaPredicted RBP13.56□□□□□ -0.24
SIL1-208ENST00000505945 CTDP1Q9Y5B0 961 aaPredicted RBP13.56□□□□□ -0.24
SIL1-208ENST00000505945 ATP2A1O14983 1001 aa13.55□□□□□ -0.24
SIL1-208ENST00000505945 TTLL1O95922 423 aa13.55□□□□□ -0.24
SIL1-208ENST00000505945 ITGB8P26012 769 aa13.55□□□□□ -0.24
SIL1-208ENST00000505945 LRRFIP1Q32MZ4 808 aaKnown RBP13.55□□□□□ -0.24
SIL1-208ENST00000505945 FAM109BQ6ICB4 259 aaPredicted RBP13.55□□□□□ -0.24
SIL1-208ENST00000505945 MSL3Q8N5Y2 521 aaKnown RBP13.55□□□□□ -0.24
SIL1-208ENST00000505945 PI4K2BQ8TCG2 481 aa13.55□□□□□ -0.24
SIL1-208ENST00000505945 NACAP1Q9BZK3 213 aa13.55□□□□□ -0.24
SIL1-208ENST00000505945 SLC38A10Q9HBR0 1119 aa13.55□□□□□ -0.24
SIL1-208ENST00000505945 FEM1BQ9UK73 627 aa13.55□□□□□ -0.24
SIL1-208ENST00000505945 FAM184BQ9ULE4 1060 aa13.55□□□□□ -0.24
SIL1-208ENST00000505945 TACC3Q9Y6A5 838 aa13.55□□□□□ -0.24
SIL1-208ENST00000505945 TTC41PQ6P2S7 1318 aa13.55□□□□□ -0.24
SIL1-208ENST00000505945 MYH4Q9Y623 1939 aa13.54□□□□□ -0.24
SIL1-208ENST00000505945 A0A1W2PQ45 241 aaPredicted RBP13.54□□□□□ -0.24
SIL1-208ENST00000505945 A0A1W2PQY0 241 aa13.54□□□□□ -0.24
SIL1-208ENST00000505945 ERC2O15083 957 aa13.54□□□□□ -0.24
SIL1-208ENST00000505945 PQBP1O60828 265 aaKnown RBP13.54□□□□□ -0.24
SIL1-208ENST00000505945 ADAMTS4O75173 837 aa13.54□□□□□ -0.24
SIL1-208ENST00000505945 TSPY3P0CV98 308 aa13.54□□□□□ -0.24
SIL1-208ENST00000505945 TSPY8P0CW00 308 aa13.54□□□□□ -0.24
SIL1-208ENST00000505945 ACLYP53396 1101 aa13.54□□□□□ -0.24
SIL1-208ENST00000505945 TFAP4Q01664 338 aa13.54□□□□□ -0.24
SIL1-208ENST00000505945 SLFN13Q68D06 897 aa13.54□□□□□ -0.24
SIL1-208ENST00000505945 MAMDC4Q6UXC1 1216 aa13.54□□□□□ -0.24
SIL1-208ENST00000505945 NEDD1Q8NHV4 660 aa13.54□□□□□ -0.24
SIL1-208ENST00000505945 CHMP4CQ96CF2 233 aa13.54□□□□□ -0.24
SIL1-208ENST00000505945 GUCD1Q96NT3 240 aa13.54□□□□□ -0.24
SIL1-208ENST00000505945 FSD1Q9BTV5 496 aa13.54□□□□□ -0.24
SIL1-208ENST00000505945 ZHX1Q9UKY1 873 aaPredicted RBP13.54□□□□□ -0.24
SIL1-208ENST00000505945 CLTBP09497 229 aa13.53□□□□□ -0.24
SIL1-208ENST00000505945 BMP3P12645 472 aa13.53□□□□□ -0.24
SIL1-208ENST00000505945 IRX5P78411 483 aaPredicted RBP13.53□□□□□ -0.24
SIL1-208ENST00000505945 PDE4BQ07343 736 aa13.53□□□□□ -0.24
SIL1-208ENST00000505945 PPARAQ07869 468 aa13.53□□□□□ -0.24
SIL1-208ENST00000505945 KCNA10Q16322 511 aa13.53□□□□□ -0.24
SIL1-208ENST00000505945 ZMYM1Q5SVZ6 1142 aa13.53□□□□□ -0.24
SIL1-208ENST00000505945 ANKRD35Q8N283 1001 aa13.53□□□□□ -0.24
SIL1-208ENST00000505945 GMCL1P1Q8NEA9 526 aa13.53□□□□□ -0.24
SIL1-208ENST00000505945 TSEN34Q9BSV6 310 aaKnown RBP13.53□□□□□ -0.24
SIL1-208ENST00000505945 NAPBQ9H115 298 aa13.53□□□□□ -0.24
SIL1-208ENST00000505945 HOMER2Q9NSB8 354 aa13.53□□□□□ -0.24
SIL1-208ENST00000505945 ISY1Q9ULR0 285 aaKnown RBP13.53□□□□□ -0.24
SIL1-208ENST00000505945 SYNPO2Q9UMS6 1093 aa13.53□□□□□ -0.24
SIL1-208ENST00000505945 SYNGAP1Q96PV0 1343 aa13.53□□□□□ -0.24
SIL1-208ENST00000505945 SYNRGQ9UMZ2 1314 aa13.53□□□□□ -0.24
SIL1-208ENST00000505945 MYADML2A6NDP7 307 aa13.52□□□□□ -0.25
SIL1-208ENST00000505945 TMEM232C9JQI7 657 aa13.52□□□□□ -0.25
SIL1-208ENST00000505945 SLC3A2P08195 630 aaKnown RBP13.52□□□□□ -0.25
SIL1-208ENST00000505945 RAG1P15918 1043 aa13.52□□□□□ -0.25
SIL1-208ENST00000505945 EPHB4P54760 987 aa13.52□□□□□ -0.25
SIL1-208ENST00000505945 ACVR2BQ13705 512 aa13.52□□□□□ -0.25
SIL1-208ENST00000505945 ZNF697Q5TEC3 545 aa13.52□□□□□ -0.25
SIL1-208ENST00000505945 CCSAPQ6IQ19 270 aaPredicted RBP13.52□□□□□ -0.25
SIL1-208ENST00000505945 CCDC129Q6ZRS4 1044 aa13.52□□□□□ -0.25
SIL1-208ENST00000505945 ZNF467Q7Z7K2 595 aaPredicted RBP13.52□□□□□ -0.25
SIL1-208ENST00000505945 KLHDC9Q8NEP7 349 aa13.52□□□□□ -0.25
SIL1-208ENST00000505945 CHST13Q8NET6 341 aa13.52□□□□□ -0.25
SIL1-208ENST00000505945 FGD4Q96M96 766 aa13.52□□□□□ -0.25
SIL1-208ENST00000505945 INCENPQ9NQS7 918 aa13.52□□□□□ -0.25
SIL1-208ENST00000505945 STARD7Q9NQZ5 370 aa13.52□□□□□ -0.25
SIL1-208ENST00000505945 TMEM39AQ9NV64 488 aa13.52□□□□□ -0.25
SIL1-208ENST00000505945 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.52□□□□□ -0.25
SIL1-208ENST00000505945 FBXO40Q9UH90 709 aa13.52□□□□□ -0.25
SIL1-208ENST00000505945 PLIN4Q96Q06 1357 aa13.51□□□□□ -0.25
SIL1-208ENST00000505945 KIAA0355O15063 1070 aa13.51□□□□□ -0.25
SIL1-208ENST00000505945 ADCY6O43306 1168 aa13.51□□□□□ -0.25
SIL1-208ENST00000505945 DUSP11O75319 330 aaKnown RBP13.51□□□□□ -0.25
SIL1-208ENST00000505945 MX1P20591 662 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms