RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 SLC4A3P48751 1232 aa29.38■■■□□ 2.29
HERC4-212ENST00000505760 LRRC41Q15345 812 aa29.38■■■□□ 2.29
HERC4-212ENST00000505760 KIFC2Q96AC6 838 aa29.38■■■□□ 2.29
HERC4-212ENST00000505760 SYNPO2Q9UMS6 1093 aa29.38■■■□□ 2.29
HERC4-212ENST00000505760 PPARAQ07869 468 aa29.37■■■□□ 2.29
HERC4-212ENST00000505760 GPR153Q6NV75 609 aa29.37■■■□□ 2.29
HERC4-212ENST00000505760 SLC39A5Q6ZMH5 540 aa29.37■■■□□ 2.29
HERC4-212ENST00000505760 CPXCR1Q8N123 301 aa29.37■■■□□ 2.29
HERC4-212ENST00000505760 LRRC47Q8N1G4 583 aaKnown RBP29.37■■■□□ 2.29
HERC4-212ENST00000505760 DDX11Q96FC9 970 aa29.37■■■□□ 2.29
HERC4-212ENST00000505760 LAMA2P24043 3122 aaKnown RBP29.36■■■□□ 2.29
HERC4-212ENST00000505760 ADCYAP1R1P41586 468 aa29.36■■■□□ 2.29
HERC4-212ENST00000505760 ANKRD45Q5TZF3 282 aa29.36■■■□□ 2.29
HERC4-212ENST00000505760 NEDD1Q8NHV4 660 aa29.36■■■□□ 2.29
HERC4-212ENST00000505760 XPNPEP3Q9NQH7 507 aa29.36■■■□□ 2.29
HERC4-212ENST00000505760 FEM1BQ9UK73 627 aa29.36■■■□□ 2.29
HERC4-212ENST00000505760 CNPY2Q9Y2B0 182 aa29.36■■■□□ 2.29
HERC4-212ENST00000505760 RIPK3Q9Y572 518 aa29.36■■■□□ 2.29
HERC4-212ENST00000505760 COL6A3P12111 3177 aa29.36■■■□□ 2.29
HERC4-212ENST00000505760 PLIN4Q96Q06 1357 aa29.36■■■□□ 2.29
HERC4-212ENST00000505760 TFAP4Q01664 338 aa29.35■■■□□ 2.29
HERC4-212ENST00000505760 GMCL1P1Q8NEA9 526 aa29.35■■■□□ 2.29
HERC4-212ENST00000505760 FERMT2Q96AC1 680 aa29.35■■■□□ 2.29
HERC4-212ENST00000505760 ATP2A1O14983 1001 aa29.34■■■□□ 2.29
HERC4-212ENST00000505760 TAL1P17542 331 aaPredicted RBP29.34■■■□□ 2.29
HERC4-212ENST00000505760 SLFN13Q68D06 897 aa29.34■■■□□ 2.29
HERC4-212ENST00000505760 CRBNQ96SW2 442 aa29.34■■■□□ 2.29
HERC4-212ENST00000505760 ISY1Q9ULR0 285 aaKnown RBP29.34■■■□□ 2.29
HERC4-212ENST00000505760 RNF180Q86T96 592 aa29.33■■■□□ 2.29
HERC4-212ENST00000505760 SLC38A10Q9HBR0 1119 aa29.33■■■□□ 2.29
HERC4-212ENST00000505760 RAVER2Q9HCJ3 691 aaKnown RBP29.33■■■□□ 2.29
HERC4-212ENST00000505760 SALL3Q9BXA9 1300 aa29.33■■■□□ 2.29
HERC4-212ENST00000505760 BMP3P12645 472 aa29.32■■■□□ 2.28
HERC4-212ENST00000505760 AKR1A1P14550 325 aa29.32■■■□□ 2.28
HERC4-212ENST00000505760 CCDC129Q6ZRS4 1044 aa29.32■■■□□ 2.28
HERC4-212ENST00000505760 MSL3Q8N5Y2 521 aaKnown RBP29.32■■■□□ 2.28
HERC4-212ENST00000505760 DEFB123Q8N688 67 aa29.32■■■□□ 2.28
HERC4-212ENST00000505760 PRDM5Q9NQX1 630 aaPredicted RBP29.32■■■□□ 2.28
HERC4-212ENST00000505760 PGK1P00558 417 aa29.31■■■□□ 2.28
HERC4-212ENST00000505760 ZNF865P0CJ78 1059 aaPredicted RBP29.31■■■□□ 2.28
HERC4-212ENST00000505760 SNX17Q15036 470 aa29.31■■■□□ 2.28
HERC4-212ENST00000505760 TRIM60Q495X7 471 aa29.31■■■□□ 2.28
HERC4-212ENST00000505760 EVI5LQ96CN4 794 aa29.31■■■□□ 2.28
HERC4-212ENST00000505760 LTBP2Q14767 1821 aa29.31■■■□□ 2.28
HERC4-212ENST00000505760 SYNGAP1Q96PV0 1343 aa29.3■■■□□ 2.28
HERC4-212ENST00000505760 PPP4R3BQ5MIZ7 849 aa29.3■■■□□ 2.28
HERC4-212ENST00000505760 ANKRD35Q8N283 1001 aa29.3■■■□□ 2.28
HERC4-212ENST00000505760 FBXO40Q9UH90 709 aa29.3■■■□□ 2.28
HERC4-212ENST00000505760 PHF24Q9UPV7 400 aa29.3■■■□□ 2.28
HERC4-212ENST00000505760 DNAJC25-GNG10A0A024R161 153 aa29.29■■■□□ 2.28
HERC4-212ENST00000505760 TMEM232C9JQI7 657 aa29.29■■■□□ 2.28
HERC4-212ENST00000505760 OAZ1P54368 228 aa29.29■■■□□ 2.28
HERC4-212ENST00000505760 CTDSPL2Q05D32 466 aa29.29■■■□□ 2.28
HERC4-212ENST00000505760 IKQ13123 557 aaPredicted RBP29.29■■■□□ 2.28
HERC4-212ENST00000505760 STX8Q9UNK0 236 aa29.29■■■□□ 2.28
HERC4-212ENST00000505760 TSPY2A6NKD2 308 aa29.28■■■□□ 2.28
HERC4-212ENST00000505760 FDX1P10109 184 aa29.28■■■□□ 2.28
HERC4-212ENST00000505760 SLC1A4P43007 532 aa29.28■■■□□ 2.28
HERC4-212ENST00000505760 STAT2P52630 851 aa29.28■■■□□ 2.28
HERC4-212ENST00000505760 C1orf53Q5VUE5 145 aa29.28■■■□□ 2.28
HERC4-212ENST00000505760 MAMDC4Q6UXC1 1216 aa29.28■■■□□ 2.28
HERC4-212ENST00000505760 Q7L0L9 218 aa29.28■■■□□ 2.28
HERC4-212ENST00000505760 CHST13Q8NET6 341 aa29.28■■■□□ 2.28
HERC4-212ENST00000505760 LENG1Q96BZ8 264 aaPredicted RBP29.28■■■□□ 2.28
HERC4-212ENST00000505760 ZHX1Q9UKY1 873 aaPredicted RBP29.28■■■□□ 2.28
HERC4-212ENST00000505760 FOXP2O15409 715 aa29.27■■■□□ 2.28
HERC4-212ENST00000505760 SNAI1O95863 264 aaPredicted RBP29.27■■■□□ 2.28
HERC4-212ENST00000505760 PDE1AP54750 535 aa29.27■■■□□ 2.28
HERC4-212ENST00000505760 HDAC1Q13547 482 aaPredicted RBP29.27■■■□□ 2.28
HERC4-212ENST00000505760 ZNF467Q7Z7K2 595 aaPredicted RBP29.27■■■□□ 2.28
HERC4-212ENST00000505760 CHURC1Q8WUH1 139 aa29.27■■■□□ 2.28
HERC4-212ENST00000505760 CHMP4CQ96CF2 233 aa29.27■■■□□ 2.28
HERC4-212ENST00000505760 HOMER2Q9NSB8 354 aa29.27■■■□□ 2.28
HERC4-212ENST00000505760 FAM184BQ9ULE4 1060 aa29.27■■■□□ 2.28
HERC4-212ENST00000505760 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.27■■■□□ 2.28
HERC4-212ENST00000505760 MCM3APO60318 1980 aa29.26■■■□□ 2.28
HERC4-212ENST00000505760 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.26■■■□□ 2.27
HERC4-212ENST00000505760 FAM160B2Q86V87 743 aa29.26■■■□□ 2.27
HERC4-212ENST00000505760 GMCL1Q96IK5 515 aa29.26■■■□□ 2.27
HERC4-212ENST00000505760 PDLIM7Q9NR12 457 aa29.26■■■□□ 2.27
HERC4-212ENST00000505760 MCCP23508 829 aa29.25■■■□□ 2.27
HERC4-212ENST00000505760 VPS53Q5VIR6 699 aa29.25■■■□□ 2.27
HERC4-212ENST00000505760 INCENPQ9NQS7 918 aa29.25■■■□□ 2.27
HERC4-212ENST00000505760 HELLSQ9NRZ9 838 aa29.25■■■□□ 2.27
HERC4-212ENST00000505760 A0A1W2PQ45 241 aaPredicted RBP29.24■■■□□ 2.27
HERC4-212ENST00000505760 A0A1W2PQY0 241 aa29.24■■■□□ 2.27
HERC4-212ENST00000505760 RANBP6O60518 1105 aaKnown RBP29.24■■■□□ 2.27
HERC4-212ENST00000505760 TLE2Q04725 743 aa29.24■■■□□ 2.27
HERC4-212ENST00000505760 STAG1Q8WVM7 1258 aa29.24■■■□□ 2.27
HERC4-212ENST00000505760 SYNRGQ9UMZ2 1314 aa29.23■■■□□ 2.27
HERC4-212ENST00000505760 NMT2O60551 498 aa29.23■■■□□ 2.27
HERC4-212ENST00000505760 ADAMTS4O75173 837 aa29.23■■■□□ 2.27
HERC4-212ENST00000505760 BADQ92934 168 aa29.23■■■□□ 2.27
HERC4-212ENST00000505760 TSEN34Q9BSV6 310 aaKnown RBP29.23■■■□□ 2.27
HERC4-212ENST00000505760 ACAD9Q9H845 621 aa29.23■■■□□ 2.27
HERC4-212ENST00000505760 IL17RBQ9NRM6 502 aa29.23■■■□□ 2.27
HERC4-212ENST00000505760 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.23■■■□□ 2.27
HERC4-212ENST00000505760 ANAPC4Q9UJX5 808 aa29.23■■■□□ 2.27
HERC4-212ENST00000505760 ACVR2BQ13705 512 aa29.22■■■□□ 2.27
HERC4-212ENST00000505760 KCTD1Q719H9 257 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms