RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 SIPA1L1O43166 1804 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 TRIM75PA6NK02 468 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 USP17L5A8MUK1 530 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 CYTH3O43739 400 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 TBC1D12O60347 775 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 KINO60870 393 aaKnown RBP9.23□□□□□ -0.93
COL4A5-208ENST00000505728 PTPREP23469 700 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 MARCKSP29966 332 aaPredicted RBP9.23□□□□□ -0.93
COL4A5-208ENST00000505728 EIF6P56537 245 aaKnown RBP9.23□□□□□ -0.93
COL4A5-208ENST00000505728 FMR1Q06787 632 aaKnown RBP eCLIP9.23□□□□□ -0.93
COL4A5-208ENST00000505728 SNW1Q13573 536 aaKnown RBP9.23□□□□□ -0.93
COL4A5-208ENST00000505728 NPY5RQ15761 445 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 ABCB5Q2M3G0 1257 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 SLC35G1Q2M3R5 365 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 BLIDQ8IZY5 108 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 FMR1NBQ8N0W7 255 aaPredicted RBP9.23□□□□□ -0.93
COL4A5-208ENST00000505728 KRI1Q8N9T8 703 aaKnown RBP9.23□□□□□ -0.93
COL4A5-208ENST00000505728 ZNF579Q8NAF0 562 aaKnown RBP9.23□□□□□ -0.93
COL4A5-208ENST00000505728 DPF2Q92785 391 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 TIGD1Q96MW7 591 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 GOLPH3LQ9H4A5 285 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 BARHL2Q9NY43 387 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 PCDHA4Q9UN74 947 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 CLEC11AQ9Y240 323 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 ZBTB12Q9Y330 459 aaPredicted RBP9.23□□□□□ -0.93
COL4A5-208ENST00000505728 GJA3Q9Y6H8 435 aa9.23□□□□□ -0.93
COL4A5-208ENST00000505728 POLR2AP24928 1970 aaKnown RBP9.23□□□□□ -0.93
COL4A5-208ENST00000505728 TCP10L2B9ZVM9 353 aa9.22□□□□□ -0.93
COL4A5-208ENST00000505728 STXBP3O00186 592 aa9.22□□□□□ -0.93
COL4A5-208ENST00000505728 CAVIN2O95810 425 aa9.22□□□□□ -0.93
COL4A5-208ENST00000505728 GOLGA8HP0CJ92 632 aa9.22□□□□□ -0.93
COL4A5-208ENST00000505728 GNA11P29992 359 aa9.22□□□□□ -0.93
COL4A5-208ENST00000505728 EPS15P42566 896 aa9.22□□□□□ -0.93
COL4A5-208ENST00000505728 TNNI2P48788 182 aa9.22□□□□□ -0.93
COL4A5-208ENST00000505728 ZNF280AP59817 542 aaPredicted RBP9.22□□□□□ -0.93
COL4A5-208ENST00000505728 C1QBPQ07021 282 aaKnown RBP9.22□□□□□ -0.93
COL4A5-208ENST00000505728 ZNF543Q08ER8 600 aa9.22□□□□□ -0.93
COL4A5-208ENST00000505728 RBM26Q5T8P6 1007 aaKnown RBP9.22□□□□□ -0.93
COL4A5-208ENST00000505728 WWC2Q6AWC2 1192 aa9.22□□□□□ -0.93
COL4A5-208ENST00000505728 PNMA8AQ86V59 439 aaPredicted RBP9.22□□□□□ -0.93
COL4A5-208ENST00000505728 ELOA2Q8IYF1 753 aaPredicted RBP9.22□□□□□ -0.93
COL4A5-208ENST00000505728 LRRC47Q8N1G4 583 aaKnown RBP9.22□□□□□ -0.93
COL4A5-208ENST00000505728 DCAF4Q8WV16 495 aa9.22□□□□□ -0.93
COL4A5-208ENST00000505728 CSRNP1Q96S65 589 aa9.22□□□□□ -0.93
COL4A5-208ENST00000505728 ZMYND12Q9H0C1 365 aa9.22□□□□□ -0.93
COL4A5-208ENST00000505728 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.22□□□□□ -0.93
COL4A5-208ENST00000505728 SEC63Q9UGP8 760 aaKnown RBP9.22□□□□□ -0.93
COL4A5-208ENST00000505728 MTMR7Q9Y216 660 aa9.22□□□□□ -0.93
COL4A5-208ENST00000505728 PCDHB6Q9Y5E3 794 aa9.22□□□□□ -0.93
COL4A5-208ENST00000505728 SRPRBQ9Y5M8 271 aaKnown RBP9.22□□□□□ -0.93
COL4A5-208ENST00000505728 A0A1B0GVL5 298 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 ESYT2A0FGR8 921 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 CLRN2A0PK11 232 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 RASSF10A6NK89 507 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 M0R2N6 131 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 ZNF202O95125 648 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 EEF2P13639 858 aaKnown RBP9.21□□□□□ -0.94
COL4A5-208ENST00000505728 MAP3K10Q02779 954 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 SEPT2Q15019 361 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 CAMK4Q16566 473 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 TTC38Q5R3I4 469 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 RESP18Q5W5W9 173 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 SASS6Q6UVJ0 657 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 PIBF1Q8WXW3 757 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 FERMT2Q96AC1 680 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 UBA5Q9GZZ9 404 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 VAT1LQ9HCJ6 419 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 C6orf50Q9HD87 102 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 MYOZ2Q9NPC6 264 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 FAM13BQ9NYF5 915 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 HPSEQ9Y251 543 aa9.21□□□□□ -0.94
COL4A5-208ENST00000505728 PNMA6FA0A0J9YX94 578 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 CCDC194A0A1B0GVG4 234 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 SMCO2A6NFE2 343 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 WNT10BO00744 389 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 PFKFB1P16118 471 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 ATP2B1P20020 1258 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 SYKP43405 635 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 NDUFA8P51970 172 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 NAPAP54920 295 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 ATP2B2Q01814 1243 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 ICA1Q05084 483 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 TYRO3Q06418 890 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 CCDC173Q0VFZ6 552 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 TNFAIP1Q13829 316 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 EARS2Q5JPH6 523 aaKnown RBP9.2□□□□□ -0.94
COL4A5-208ENST00000505728 SLFN13Q68D06 897 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 PPP1R18Q6NYC8 613 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 SHC4Q6S5L8 630 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 PIK3AP1Q6ZUJ8 805 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 KRT25Q7Z3Z0 450 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 HEATR3Q7Z4Q2 680 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 SIAH1Q8IUQ4 282 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 CKAP2LQ8IYA6 745 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 GMCL1P1Q8NEA9 526 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 GPKOWQ92917 476 aaPredicted RBP eCLIP9.2□□□□□ -0.94
COL4A5-208ENST00000505728 MTMR8Q96EF0 704 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 PIGSQ96S52 555 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 SDF4Q9BRK5 362 aa9.2□□□□□ -0.94
COL4A5-208ENST00000505728 PANK2Q9BZ23 570 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms