RNA–Protein interactions for RNA: ENST00000505672.5

CCND3-208, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 932 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-208ENST00000505672 RAD21O60216 631 aa21.42■■□□□ 1.02
CCND3-208ENST00000505672 MYCNP04198 464 aaPredicted RBP21.42■■□□□ 1.02
CCND3-208ENST00000505672 FAM109BQ6ICB4 259 aaPredicted RBP21.42■■□□□ 1.02
CCND3-208ENST00000505672 CCDC129Q6ZRS4 1044 aa21.42■■□□□ 1.02
CCND3-208ENST00000505672 SMC5Q8IY18 1101 aa21.42■■□□□ 1.02
CCND3-208ENST00000505672 TINF2Q9BSI4 451 aa21.42■■□□□ 1.02
CCND3-208ENST00000505672 NAPBQ9H115 298 aa21.42■■□□□ 1.02
CCND3-208ENST00000505672 GOPCQ9HD26 462 aa21.42■■□□□ 1.02
CCND3-208ENST00000505672 CDH23Q9H251 3354 aa21.42■■□□□ 1.02
CCND3-208ENST00000505672 TRIM43BA6NCK2 446 aa21.41■■□□□ 1.02
CCND3-208ENST00000505672 PRDM1O75626 825 aa21.41■■□□□ 1.02
CCND3-208ENST00000505672 ZNF865P0CJ78 1059 aaPredicted RBP21.41■■□□□ 1.02
CCND3-208ENST00000505672 SHHQ15465 462 aa21.41■■□□□ 1.02
CCND3-208ENST00000505672 C9orf50Q5SZB4 431 aa21.41■■□□□ 1.02
CCND3-208ENST00000505672 C1orf53Q5VUE5 145 aa21.41■■□□□ 1.02
CCND3-208ENST00000505672 BADQ92934 168 aa21.41■■□□□ 1.02
CCND3-208ENST00000505672 TRIM43Q96BQ3 446 aaPredicted RBP21.41■■□□□ 1.02
CCND3-208ENST00000505672 NUP88Q99567 741 aaPredicted RBP21.41■■□□□ 1.02
CCND3-208ENST00000505672 ZNF287Q9HBT7 754 aa21.41■■□□□ 1.02
CCND3-208ENST00000505672 PDLIM7Q9NR12 457 aa21.41■■□□□ 1.02
CCND3-208ENST00000505672 PRKAG2Q9UGJ0 569 aa21.41■■□□□ 1.02
CCND3-208ENST00000505672 NRBP1Q9UHY1 535 aa21.41■■□□□ 1.02
CCND3-208ENST00000505672 DIS3Q9Y2L1 958 aaKnown RBP21.41■■□□□ 1.02
CCND3-208ENST00000505672 PLXNA1Q9UIW2 1896 aa21.41■■□□□ 1.02
CCND3-208ENST00000505672 IGHDP01880 384 aa21.4■■□□□ 1.02
CCND3-208ENST00000505672 ZNF444Q8N0Y2 327 aaPredicted RBP21.4■■□□□ 1.02
CCND3-208ENST00000505672 PHF24Q9UPV7 400 aa21.4■■□□□ 1.02
CCND3-208ENST00000505672 RIPK3Q9Y572 518 aa21.4■■□□□ 1.02
CCND3-208ENST00000505672 SUPT16HQ9Y5B9 1047 aaKnown RBP21.4■■□□□ 1.02
CCND3-208ENST00000505672 VCANP13611 3396 aa21.39■■□□□ 1.02
CCND3-208ENST00000505672 ITGB8P26012 769 aa21.39■■□□□ 1.01
CCND3-208ENST00000505672 FAM161BQ96MY7 647 aa21.39■■□□□ 1.01
CCND3-208ENST00000505672 PRDM5Q9NQX1 630 aaPredicted RBP21.39■■□□□ 1.01
CCND3-208ENST00000505672 PRUNE2Q8WUY3 3088 aa21.38■■□□□ 1.01
CCND3-208ENST00000505672 IGKV6D-41A0A0C4DH26 115 aa21.38■■□□□ 1.01
CCND3-208ENST00000505672 F5H6K3 240 aa21.38■■□□□ 1.01
CCND3-208ENST00000505672 FOXP2O15409 715 aa21.38■■□□□ 1.01
CCND3-208ENST00000505672 PGK1P00558 417 aa21.38■■□□□ 1.01
CCND3-208ENST00000505672 TLE2Q04725 743 aa21.38■■□□□ 1.01
CCND3-208ENST00000505672 KLRC3Q07444 240 aa21.38■■□□□ 1.01
CCND3-208ENST00000505672 PPARAQ07869 468 aa21.38■■□□□ 1.01
CCND3-208ENST00000505672 KCTD2Q14681 263 aa21.38■■□□□ 1.01
CCND3-208ENST00000505672 CHD1LQ86WJ1 897 aa21.38■■□□□ 1.01
CCND3-208ENST00000505672 LENG1Q96BZ8 264 aaPredicted RBP21.38■■□□□ 1.01
CCND3-208ENST00000505672 XPNPEP3Q9NQH7 507 aa21.38■■□□□ 1.01
CCND3-208ENST00000505672 NYAP2Q9P242 653 aa21.38■■□□□ 1.01
CCND3-208ENST00000505672 TRIM6-TRIM34B2RNG4 842 aa21.37■■□□□ 1.01
CCND3-208ENST00000505672 SLC3A2P08195 630 aaKnown RBP21.37■■□□□ 1.01
CCND3-208ENST00000505672 RARBP10826 455 aa21.37■■□□□ 1.01
CCND3-208ENST00000505672 PDE4BQ07343 736 aa21.37■■□□□ 1.01
CCND3-208ENST00000505672 SLF1Q9BQI6 1058 aa21.37■■□□□ 1.01
CCND3-208ENST00000505672 SNAI1O95863 264 aaPredicted RBP21.36■■□□□ 1.01
CCND3-208ENST00000505672 NDUFB10O96000 172 aa21.36■■□□□ 1.01
CCND3-208ENST00000505672 NUCB1Q02818 461 aa21.36■■□□□ 1.01
CCND3-208ENST00000505672 CEP95Q96GE4 821 aa21.36■■□□□ 1.01
CCND3-208ENST00000505672 FAM227BQ96M60 508 aa21.36■■□□□ 1.01
CCND3-208ENST00000505672 HELLSQ9NRZ9 838 aa21.36■■□□□ 1.01
CCND3-208ENST00000505672 CLIP2Q9UDT6 1046 aa21.36■■□□□ 1.01
CCND3-208ENST00000505672 PLIN4Q96Q06 1357 aa21.36■■□□□ 1.01
CCND3-208ENST00000505672 DNAJC25-GNG10A0A024R161 153 aa21.35■■□□□ 1.01
CCND3-208ENST00000505672 A0A0D9SFI3 127 aa21.35■■□□□ 1.01
CCND3-208ENST00000505672 ADAMTS4O75173 837 aa21.35■■□□□ 1.01
CCND3-208ENST00000505672 VPS53Q5VIR6 699 aa21.35■■□□□ 1.01
CCND3-208ENST00000505672 SNRNP48Q6IEG0 339 aaKnown RBP21.35■■□□□ 1.01
CCND3-208ENST00000505672 RILPL2Q969X0 211 aa21.35■■□□□ 1.01
CCND3-208ENST00000505672 A0A1W2PQ45 241 aaPredicted RBP21.34■■□□□ 1.01
CCND3-208ENST00000505672 A0A1W2PQY0 241 aa21.34■■□□□ 1.01
CCND3-208ENST00000505672 TSPY3P0CV98 308 aa21.34■■□□□ 1.01
CCND3-208ENST00000505672 TSPY8P0CW00 308 aa21.34■■□□□ 1.01
CCND3-208ENST00000505672 COPB2P35606 906 aa21.34■■□□□ 1.01
CCND3-208ENST00000505672 EPHB4P54760 987 aa21.34■■□□□ 1.01
CCND3-208ENST00000505672 RNF180Q86T96 592 aa21.34■■□□□ 1.01
CCND3-208ENST00000505672 PLEKHM2Q8IWE5 1019 aa21.34■■□□□ 1.01
CCND3-208ENST00000505672 PRPF38AQ8NAV1 312 aaKnown RBP21.34■■□□□ 1.01
CCND3-208ENST00000505672 NEDD1Q8NHV4 660 aa21.34■■□□□ 1.01
CCND3-208ENST00000505672 MKL1Q969V6 931 aa21.34■■□□□ 1.01
CCND3-208ENST00000505672 TEX13BQ9BXU2 312 aa21.34■■□□□ 1.01
CCND3-208ENST00000505672 MTMR4Q9NYA4 1195 aa21.34■■□□□ 1.01
CCND3-208ENST00000505672 SPTBN5Q9NRC6 3674 aaKnown RBP21.34■■□□□ 1.01
CCND3-208ENST00000505672 ATP2A1O14983 1001 aa21.33■■□□□ 1.01
CCND3-208ENST00000505672 TTLL1O95922 423 aa21.33■■□□□ 1.01
CCND3-208ENST00000505672 AKR1A1P14550 325 aa21.33■■□□□ 1.01
CCND3-208ENST00000505672 TFAP4Q01664 338 aa21.33■■□□□ 1.01
CCND3-208ENST00000505672 CTDSPL2Q05D32 466 aa21.33■■□□□ 1.01
CCND3-208ENST00000505672 MCMDC2Q4G0Z9 681 aa21.33■■□□□ 1.01
CCND3-208ENST00000505672 CCSAPQ6IQ19 270 aaPredicted RBP21.33■■□□□ 1.01
CCND3-208ENST00000505672 MAMDC4Q6UXC1 1216 aa21.33■■□□□ 1.01
CCND3-208ENST00000505672 TICAM2Q86XR7 235 aa21.33■■□□□ 1.01
CCND3-208ENST00000505672 LRRC47Q8N1G4 583 aaKnown RBP21.33■■□□□ 1.01
CCND3-208ENST00000505672 SEMA6BQ9H3T3 888 aa21.33■■□□□ 1.01
CCND3-208ENST00000505672 TACC3Q9Y6A5 838 aa21.33■■□□□ 1.01
CCND3-208ENST00000505672 LAMA4Q16363 1823 aa21.32■■□□□ 1
CCND3-208ENST00000505672 CLTBP09497 229 aa21.32■■□□□ 1
CCND3-208ENST00000505672 IRX5P78411 483 aaPredicted RBP21.32■■□□□ 1
CCND3-208ENST00000505672 NMIQ13287 307 aaPredicted RBP21.32■■□□□ 1
CCND3-208ENST00000505672 MSL3Q8N5Y2 521 aaKnown RBP21.32■■□□□ 1
CCND3-208ENST00000505672 KLHDC9Q8NEP7 349 aa21.32■■□□□ 1
CCND3-208ENST00000505672 FGD4Q96M96 766 aa21.32■■□□□ 1
CCND3-208ENST00000505672 CDX2Q99626 313 aaPredicted RBP21.32■■□□□ 1
CCND3-208ENST00000505672 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms