RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 GADL1Q6ZQY3 521 aa11.93□□□□□ -0.5
RFC1-210ENST00000505077 TMTC3Q6ZXV5 915 aa11.93□□□□□ -0.5
RFC1-210ENST00000505077 ANKRD23Q86SG2 305 aa11.93□□□□□ -0.5
RFC1-210ENST00000505077 GTF3C2Q8WUA4 911 aaPredicted RBP11.93□□□□□ -0.5
RFC1-210ENST00000505077 TMX3Q96JJ7 454 aa11.93□□□□□ -0.5
RFC1-210ENST00000505077 SLF1Q9BQI6 1058 aa11.93□□□□□ -0.5
RFC1-210ENST00000505077 MYL10Q9BUA6 226 aa11.93□□□□□ -0.5
RFC1-210ENST00000505077 SPZ1Q9BXG8 430 aa11.93□□□□□ -0.5
RFC1-210ENST00000505077 TANGO6Q9C0B7 1094 aa11.93□□□□□ -0.5
RFC1-210ENST00000505077 RPAP3Q9H6T3 665 aaPredicted RBP11.93□□□□□ -0.5
RFC1-210ENST00000505077 PNMA2Q9UL42 364 aa11.93□□□□□ -0.5
RFC1-210ENST00000505077 PCNTO95613 3336 aa11.93□□□□□ -0.5
RFC1-210ENST00000505077 CASP8AP2Q9UKL3 1982 aa11.92□□□□□ -0.5
RFC1-210ENST00000505077 STK36Q9NRP7 1315 aa11.92□□□□□ -0.5
RFC1-210ENST00000505077 KLRF2D3W0D1 207 aa11.92□□□□□ -0.5
RFC1-210ENST00000505077 SCRN1Q12765 414 aa11.92□□□□□ -0.5
RFC1-210ENST00000505077 KIAA1755Q5JYT7 1200 aa11.92□□□□□ -0.5
RFC1-210ENST00000505077 OTUD7BQ6GQQ9 843 aa11.92□□□□□ -0.5
RFC1-210ENST00000505077 LBX2Q6XYB7 198 aa11.92□□□□□ -0.5
RFC1-210ENST00000505077 CATSPERGQ6ZRH7 1159 aa11.92□□□□□ -0.5
RFC1-210ENST00000505077 KCTD1Q719H9 257 aa11.92□□□□□ -0.5
RFC1-210ENST00000505077 NOL8Q76FK4 1167 aaKnown RBP11.92□□□□□ -0.5
RFC1-210ENST00000505077 PRPF38AQ8NAV1 312 aaKnown RBP11.92□□□□□ -0.5
RFC1-210ENST00000505077 CAPNS2Q96L46 248 aa11.92□□□□□ -0.5
RFC1-210ENST00000505077 RNF26Q9BY78 433 aaPredicted RBP11.92□□□□□ -0.5
RFC1-210ENST00000505077 MTMR7Q9Y216 660 aa11.92□□□□□ -0.5
RFC1-210ENST00000505077 ZNF236Q9UL36 1845 aa11.92□□□□□ -0.5
RFC1-210ENST00000505077 CEP350Q5VT06 3117 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 CNTNAP5Q8WYK1 1306 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 DOCK3Q8IZD9 2030 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 TMEM232C9JQI7 657 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 FLOT1O75955 427 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 ALDH1A1P00352 501 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 IFNAR1P17181 557 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 RXRAP19793 462 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 OSBPP22059 807 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 MAP2K2P36507 400 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 IRX3P78415 501 aaPredicted RBP11.91□□□□□ -0.5
RFC1-210ENST00000505077 TRAF1Q13077 416 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 IKQ13123 557 aaPredicted RBP11.91□□□□□ -0.5
RFC1-210ENST00000505077 CUL4AQ13619 759 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 TREML2Q5T2D2 321 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 SYDE2Q5VT97 1194 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 CCDC144CPQ8IYA2 1237 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 TRIM22Q8IYM9 498 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 MB21D1Q8N884 522 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 BRI3BPQ8WY22 251 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 INTS4Q96HW7 963 aaKnown RBP11.91□□□□□ -0.5
RFC1-210ENST00000505077 PARK7Q99497 189 aaKnown RBP11.91□□□□□ -0.5
RFC1-210ENST00000505077 NUP88Q99567 741 aaPredicted RBP11.91□□□□□ -0.5
RFC1-210ENST00000505077 RIOX1Q9H6W3 641 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 HOXC10Q9NYD6 342 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 PPP1R9AQ9ULJ8 1098 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 ISY1Q9ULR0 285 aaKnown RBP11.91□□□□□ -0.5
RFC1-210ENST00000505077 KIF3AQ9Y496 699 aa11.91□□□□□ -0.5
RFC1-210ENST00000505077 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.91□□□□□ -0.5
RFC1-210ENST00000505077 FRMPD2Q68DX3 1309 aaPredicted RBP11.9□□□□□ -0.5
RFC1-210ENST00000505077 hCG_1984214I3L0E3 225 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 LARGE1O95461 756 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 CDC27P30260 824 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 TM4SF4P48230 202 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 OAZ1P54368 228 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 CCT2P78371 535 aaKnown RBP11.9□□□□□ -0.5
RFC1-210ENST00000505077 HMGN5P82970 282 aaKnown RBP11.9□□□□□ -0.5
RFC1-210ENST00000505077 FUT2Q10981 343 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 STK3Q13188 491 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 COG2Q14746 738 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 NTRK3Q16288 839 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 CYP4F22Q6NT55 531 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 GPAT2Q6NUI2 795 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 RASGRP2Q7LDG7 609 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 FAM177A1Q8N128 213 aaPredicted RBP11.9□□□□□ -0.5
RFC1-210ENST00000505077 STAG2Q8N3U4 1231 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 ZNF713Q8N859 430 aaPredicted RBP11.9□□□□□ -0.5
RFC1-210ENST00000505077 NCOA5Q9HCD5 579 aaKnown RBP11.9□□□□□ -0.5
RFC1-210ENST00000505077 GPCPD1Q9NPB8 672 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 FAM217BQ9NTX9 383 aaPredicted RBP11.9□□□□□ -0.5
RFC1-210ENST00000505077 SEC63Q9UGP8 760 aaKnown RBP11.9□□□□□ -0.5
RFC1-210ENST00000505077 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
RFC1-210ENST00000505077 LCTP09848 1927 aa11.9□□□□□ -0.51
RFC1-210ENST00000505077 WDR33Q9C0J8 1336 aaKnown RBP11.89□□□□□ -0.51
RFC1-210ENST00000505077 BTBD19C9JJ37 291 aa11.89□□□□□ -0.51
RFC1-210ENST00000505077 PLEKHA8P1O95397 391 aa11.89□□□□□ -0.51
RFC1-210ENST00000505077 FMNL1O95466 1100 aaPredicted RBP11.89□□□□□ -0.51
RFC1-210ENST00000505077 GOLGA8HP0CJ92 632 aa11.89□□□□□ -0.51
RFC1-210ENST00000505077 DSG3P32926 999 aa11.89□□□□□ -0.51
RFC1-210ENST00000505077 GCLCP48506 637 aaPredicted RBP11.89□□□□□ -0.51
RFC1-210ENST00000505077 AKAP17AQ02040 695 aaKnown RBP11.89□□□□□ -0.51
RFC1-210ENST00000505077 MKRN3Q13064 507 aaKnown RBP11.89□□□□□ -0.51
RFC1-210ENST00000505077 DGKZQ13574 1117 aa11.89□□□□□ -0.51
RFC1-210ENST00000505077 RAB11FIP4Q86YS3 637 aa11.89□□□□□ -0.51
RFC1-210ENST00000505077 IFNL1Q8IU54 200 aa11.89□□□□□ -0.51
RFC1-210ENST00000505077 TEX2Q8IWB9 1127 aa11.89□□□□□ -0.51
RFC1-210ENST00000505077 CCDC83Q8IWF9 413 aa11.89□□□□□ -0.51
RFC1-210ENST00000505077 WASF1Q92558 559 aa11.89□□□□□ -0.51
RFC1-210ENST00000505077 MTMR8Q96EF0 704 aa11.89□□□□□ -0.51
RFC1-210ENST00000505077 RRP36Q96EU6 259 aaKnown RBP11.89□□□□□ -0.51
RFC1-210ENST00000505077 LARP6Q9BRS8 491 aaKnown RBP11.89□□□□□ -0.51
RFC1-210ENST00000505077 ASCC2Q9H1I8 757 aaPredicted RBP11.89□□□□□ -0.51
RFC1-210ENST00000505077 RANBP17Q9H2T7 1088 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms