RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 E7EWF7 191 aa11.53□□□□□ -0.56
NR1I3-220ENST00000505005 ABCB7O75027 752 aa11.53□□□□□ -0.56
NR1I3-220ENST00000505005 KIF5BP33176 963 aa11.53□□□□□ -0.56
NR1I3-220ENST00000505005 GNAQP50148 359 aa11.53□□□□□ -0.56
NR1I3-220ENST00000505005 PLS1Q14651 629 aa11.53□□□□□ -0.56
NR1I3-220ENST00000505005 KCTD2Q14681 263 aa11.53□□□□□ -0.56
NR1I3-220ENST00000505005 NECTIN1Q15223 517 aa11.53□□□□□ -0.56
NR1I3-220ENST00000505005 BTNL9Q6UXG8 535 aa11.53□□□□□ -0.56
NR1I3-220ENST00000505005 GPR142Q7Z601 462 aa11.53□□□□□ -0.56
NR1I3-220ENST00000505005 DPP9Q86TI2 863 aa11.53□□□□□ -0.56
NR1I3-220ENST00000505005 MSL3Q8N5Y2 521 aaKnown RBP11.53□□□□□ -0.56
NR1I3-220ENST00000505005 SAMD3Q8N6K7 520 aa11.53□□□□□ -0.56
NR1I3-220ENST00000505005 PNMA1Q8ND90 353 aa11.53□□□□□ -0.56
NR1I3-220ENST00000505005 LZTS2Q9BRK4 669 aa11.53□□□□□ -0.56
NR1I3-220ENST00000505005 LOC102724159A0A0B4J2E5 919 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 B4E1Z4 1266 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 IFIT3O14879 490 aaKnown RBP11.52□□□□□ -0.57
NR1I3-220ENST00000505005 ADCY3O60266 1144 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 MSCO60682 206 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 HOXC6P09630 235 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 PTPREP23469 700 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 SMARCA1P28370 1054 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 LIFRP42702 1097 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 FLT3LGP49771 235 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 EVX2Q03828 476 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 MAP2K5Q13163 448 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 WTAPQ15007 396 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 PWP2Q15269 919 aaKnown RBP11.52□□□□□ -0.57
NR1I3-220ENST00000505005 CCDC96Q2M329 555 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 SHROOM1Q2M3G4 852 aaPredicted RBP11.52□□□□□ -0.57
NR1I3-220ENST00000505005 WDR78Q5VTH9 848 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 MFSD14CQ5VZR4 134 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.52□□□□□ -0.57
NR1I3-220ENST00000505005 CATIPQ7Z7H3 387 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 NCAPG2Q86XI2 1143 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 TBC1D10CQ8IV04 446 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 KIFC2Q96AC6 838 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 APBA2Q99767 749 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 LSG1Q9H089 658 aaKnown RBP11.52□□□□□ -0.57
NR1I3-220ENST00000505005 SLC38A10Q9HBR0 1119 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 NRBP1Q9UHY1 535 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 TNKSO95271 1327 aa11.52□□□□□ -0.57
NR1I3-220ENST00000505005 CCDC85CA6NKD9 419 aa11.51□□□□□ -0.57
NR1I3-220ENST00000505005 HMGCRP04035 888 aa11.51□□□□□ -0.57
NR1I3-220ENST00000505005 PARP1P09874 1014 aaKnown RBP11.51□□□□□ -0.57
NR1I3-220ENST00000505005 SNHG28P0DPA3 235 aa11.51□□□□□ -0.57
NR1I3-220ENST00000505005 PTH1RQ03431 593 aa11.51□□□□□ -0.57
NR1I3-220ENST00000505005 CREB3L3Q68CJ9 461 aa11.51□□□□□ -0.57
NR1I3-220ENST00000505005 TEX2Q8IWB9 1127 aa11.51□□□□□ -0.57
NR1I3-220ENST00000505005 LRRC47Q8N1G4 583 aaKnown RBP11.51□□□□□ -0.57
NR1I3-220ENST00000505005 ATG4CQ96DT6 458 aa11.51□□□□□ -0.57
NR1I3-220ENST00000505005 NEK1Q96PY6 1258 aa11.51□□□□□ -0.57
NR1I3-220ENST00000505005 MOV10L1Q9BXT6 1211 aaKnown RBP11.51□□□□□ -0.57
NR1I3-220ENST00000505005 MAP3K20Q9NYL2 800 aaKnown RBP11.51□□□□□ -0.57
NR1I3-220ENST00000505005 CCDC69A6NI79 296 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 SLC27A2O14975 620 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 PDHBP11177 359 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 ERCC3P19447 782 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 RCAN1P53805 252 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 FGD1P98174 961 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 PRKCZQ05513 592 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 ZNF543Q08ER8 600 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 GRB14Q14449 540 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 Q3C1V9 767 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 OLFML2BQ68BL8 750 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 ENAHQ8N8S7 591 aaPredicted RBP11.5□□□□□ -0.57
NR1I3-220ENST00000505005 CTCFLQ8NI51 663 aaPredicted RBP11.5□□□□□ -0.57
NR1I3-220ENST00000505005 CHMP4CQ96CF2 233 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 DDX11Q96FC9 970 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 TXNRD2Q9NNW7 524 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 HMX1Q9NP08 348 aaPredicted RBP11.5□□□□□ -0.57
NR1I3-220ENST00000505005 GJD2Q9UKL4 321 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 PTCH2Q9Y6C5 1203 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 PFASO15067 1338 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 NEDD4P46934 1319 aa11.5□□□□□ -0.57
NR1I3-220ENST00000505005 CCDC196A0A1B0GTZ2 297 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 SMIM22K7EJ46 135 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 DDAH1O94760 285 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 ICAM1P05362 532 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 TMEM132BQ14DG7 1078 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 TMEM67Q5HYA8 995 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 MORN1Q5T089 497 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 SYDE2Q5VT97 1194 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 SNRNP48Q6IEG0 339 aaKnown RBP11.49□□□□□ -0.57
NR1I3-220ENST00000505005 DHX32Q7L7V1 743 aaKnown RBP11.49□□□□□ -0.57
NR1I3-220ENST00000505005 ZNF467Q7Z7K2 595 aaPredicted RBP11.49□□□□□ -0.57
NR1I3-220ENST00000505005 MCF2L2Q86YR7 1114 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 CLEC10AQ8IUN9 316 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 ZNF333Q96JL9 665 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 MMP19Q99542 508 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 NBPF3Q9H094 633 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 ACAD9Q9H845 621 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 BTBD7Q9P203 1132 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 ZNF214Q9UL59 606 aaPredicted RBP11.49□□□□□ -0.57
NR1I3-220ENST00000505005 RPTORQ8N122 1335 aa11.49□□□□□ -0.57
NR1I3-220ENST00000505005 CNMDO75829 334 aa11.48□□□□□ -0.57
NR1I3-220ENST00000505005 HSPA4P34932 840 aa11.48□□□□□ -0.57
NR1I3-220ENST00000505005 ANAPC15P60006 121 aa11.48□□□□□ -0.57
NR1I3-220ENST00000505005 NFXL1Q6ZNB6 911 aa11.48□□□□□ -0.57
NR1I3-220ENST00000505005 ANKRD35Q8N283 1001 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms