RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 NLRP8Q86W28 1048 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 ERC1Q8IUD2 1116 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 CNTROBQ8N137 903 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 CLASRPQ8N2M8 674 aaKnown RBP6.77□□□□□ -1.33
SNX25-203ENST00000504959 CEP120Q8N960 986 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 LINS1Q8NG48 757 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 JARID2Q92833 1246 aaPredicted RBP6.77□□□□□ -1.33
SNX25-203ENST00000504959 TNPO1Q92973 898 aaKnown RBP6.77□□□□□ -1.33
SNX25-203ENST00000504959 FMNL2Q96PY5 1086 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 FERD3LQ96RJ6 166 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 IRF2BPLQ9H1B7 796 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 PRDM11Q9NQV5 511 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 DDX56Q9NY93 547 aaKnown RBP6.77□□□□□ -1.33
SNX25-203ENST00000504959 HCN2Q9UL51 889 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 KDM6AO15550 1401 aaPredicted RBP6.77□□□□□ -1.33
SNX25-203ENST00000504959 GOLGA6L3A6NEY3 463 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 FIGNL2A6NMB9 653 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 GOLGA6L22H0YM25 854 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 NFKBIEO00221 500 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 GRM8O00222 908 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 MAP4K4O95819 1239 aaPredicted RBP6.77□□□□□ -1.33
SNX25-203ENST00000504959 SNRPA1P09661 255 aaKnown RBP6.77□□□□□ -1.33
SNX25-203ENST00000504959 IFIT2P09913 472 aaKnown RBP6.77□□□□□ -1.33
SNX25-203ENST00000504959 DDIT3P35638 169 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 ZNF157P51786 506 aaPredicted RBP6.77□□□□□ -1.33
SNX25-203ENST00000504959 RPS26P62854 115 aaKnown RBP6.77□□□□□ -1.33
SNX25-203ENST00000504959 IFRD2Q12894 506 aaPredicted RBP6.77□□□□□ -1.33
SNX25-203ENST00000504959 G3BP1Q13283 466 aaKnown RBP eCLIP6.77□□□□□ -1.33
SNX25-203ENST00000504959 RASGRF1Q13972 1273 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 RAB3GAP1Q15042 981 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 TOM1L2Q6ZVM7 507 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 BRINP3Q76B58 766 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 HOMER1Q86YM7 354 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 GATAD2BQ8WXI9 593 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 NSUN5Q96P11 429 aaKnown RBP6.77□□□□□ -1.33
SNX25-203ENST00000504959 ZNF576Q9H609 170 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 SUGT1Q9Y2Z0 365 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 CPDO75976 1380 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 PLEKHG2Q9H7P9 1386 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 LAMB4A4D0S4 1761 aa6.77□□□□□ -1.33
SNX25-203ENST00000504959 ARFGEF2Q9Y6D5 1785 aa6.76□□□□□ -1.33
SNX25-203ENST00000504959 TTC41PQ6P2S7 1318 aa6.76□□□□□ -1.33
SNX25-203ENST00000504959 A0A096LPE4 126 aa6.76□□□□□ -1.33
SNX25-203ENST00000504959 A0A1W2PPZ6 126 aa6.76□□□□□ -1.33
SNX25-203ENST00000504959 DCDC2BA2VCK2 349 aa6.76□□□□□ -1.33
SNX25-203ENST00000504959 EFSO43281 561 aa6.76□□□□□ -1.33
SNX25-203ENST00000504959 THBS1P07996 1170 aa6.76□□□□□ -1.33
SNX25-203ENST00000504959 XRCC6P12956 609 aaKnown RBP eCLIP6.76□□□□□ -1.33
SNX25-203ENST00000504959 MTX1Q13505 466 aa6.76□□□□□ -1.33
SNX25-203ENST00000504959 LARP1BQ659C4 914 aaKnown RBP6.76□□□□□ -1.33
SNX25-203ENST00000504959 GK5Q6ZS86 529 aa6.76□□□□□ -1.33
SNX25-203ENST00000504959 COPS6Q7L5N1 327 aa6.76□□□□□ -1.33
SNX25-203ENST00000504959 DHX37Q8IY37 1157 aaKnown RBP6.76□□□□□ -1.33
SNX25-203ENST00000504959 XAGE3Q8WTP9 111 aa6.76□□□□□ -1.33
SNX25-203ENST00000504959 ZNF496Q96IT1 587 aaPredicted RBP6.76□□□□□ -1.33
SNX25-203ENST00000504959 BHLHE41Q9C0J9 482 aaPredicted RBP6.76□□□□□ -1.33
SNX25-203ENST00000504959 BRMS1Q9HCU9 246 aa6.76□□□□□ -1.33
SNX25-203ENST00000504959 STRN4Q9NRL3 753 aa6.76□□□□□ -1.33
SNX25-203ENST00000504959 GPN3Q9UHW5 284 aaPredicted RBP6.76□□□□□ -1.33
SNX25-203ENST00000504959 PCDH11XQ9BZA7 1347 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 PCDH11YQ9BZA8 1340 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 TTLL8A6PVC2 850 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 TERTO14746 1132 aaKnown RBP6.75□□□□□ -1.33
SNX25-203ENST00000504959 CYP27B1O15528 508 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 WIPF1O43516 503 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 TOM1O60784 492 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 GLRX3O76003 335 aaKnown RBP6.75□□□□□ -1.33
SNX25-203ENST00000504959 SOX18P35713 384 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 MCM2P49736 904 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 NEK4P51957 841 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 EVA1CP58658 441 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 NUCB2P80303 420 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 CLCQ05315 142 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 KIAA1211Q6ZU35 1233 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 RAB44Q7Z6P3 723 aaPredicted RBP6.75□□□□□ -1.33
SNX25-203ENST00000504959 CERS3Q8IU89 383 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 UNC5CLQ8IV45 518 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 PGBD3Q8N328 593 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 ASAP3Q8TDY4 903 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 GAS2L1Q99501 681 aaPredicted RBP6.75□□□□□ -1.33
SNX25-203ENST00000504959 MYD88Q99836 296 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 ZFYVE1Q9HBF4 777 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 TLR7Q9NYK1 1049 aaKnown RBP6.75□□□□□ -1.33
SNX25-203ENST00000504959 ZNRF3Q9ULT6 936 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 MRC1P22897 1456 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 WDR17Q8IZU2 1322 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 F11P03951 625 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 PSAPP07602 524 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 HYAL2Q12891 473 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 SKOR2Q2VWA4 1001 aaPredicted RBP6.75□□□□□ -1.33
SNX25-203ENST00000504959 ARSHQ5FYA8 562 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 REC114Q7Z4M0 266 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 LSRQ86X29 649 aaPredicted RBP6.75□□□□□ -1.33
SNX25-203ENST00000504959 PI4K2BQ8TCG2 481 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 RUFY2Q8WXA3 655 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 NXPE3Q969Y0 559 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 SUCLG2Q96I99 432 aa6.75□□□□□ -1.33
SNX25-203ENST00000504959 METTL22Q9BUU2 404 aaPredicted RBP6.75□□□□□ -1.33
SNX25-203ENST00000504959 MIR1-1HGQ9H1L0 117 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms