RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 SMCO2A6NFE2 343 aa17.53■□□□□ 0.4
SNCAIP-207ENST00000504884 SERPINC1P01008 464 aa17.53■□□□□ 0.4
SNCAIP-207ENST00000504884 ERCC5P28715 1186 aaPredicted RBP17.53■□□□□ 0.4
SNCAIP-207ENST00000504884 AFMP43652 599 aa17.53■□□□□ 0.4
SNCAIP-207ENST00000504884 UBASH3AP57075 661 aa17.53■□□□□ 0.4
SNCAIP-207ENST00000504884 PPP4R3BQ5MIZ7 849 aa17.53■□□□□ 0.4
SNCAIP-207ENST00000504884 DTHD1Q6ZMT9 781 aa17.53■□□□□ 0.4
SNCAIP-207ENST00000504884 KRT25Q7Z3Z0 450 aa17.53■□□□□ 0.4
SNCAIP-207ENST00000504884 EHD4Q9H223 541 aa17.53■□□□□ 0.4
SNCAIP-207ENST00000504884 VAT1LQ9HCJ6 419 aa17.53■□□□□ 0.4
SNCAIP-207ENST00000504884 KCNQ5Q9NR82 932 aa17.53■□□□□ 0.4
SNCAIP-207ENST00000504884 SNHG28P0DPA3 235 aa17.52■□□□□ 0.4
SNCAIP-207ENST00000504884 ATP1A3P13637 1013 aa17.52■□□□□ 0.4
SNCAIP-207ENST00000504884 TXLNAP40222 546 aa17.52■□□□□ 0.4
SNCAIP-207ENST00000504884 DPYDQ12882 1025 aa17.52■□□□□ 0.4
SNCAIP-207ENST00000504884 DACT2Q5SW24 774 aa17.52■□□□□ 0.4
SNCAIP-207ENST00000504884 CC2D2BQ6DHV5 1058 aa17.52■□□□□ 0.4
SNCAIP-207ENST00000504884 HOMER1Q86YM7 354 aa17.52■□□□□ 0.4
SNCAIP-207ENST00000504884 CCDC17Q96LX7 622 aa17.52■□□□□ 0.4
SNCAIP-207ENST00000504884 DHX36Q9H2U1 1008 aaKnown RBP17.52■□□□□ 0.4
SNCAIP-207ENST00000504884 CPVLQ9H3G5 476 aa17.52■□□□□ 0.4
SNCAIP-207ENST00000504884 ECE2O60344 883 aa17.52■□□□□ 0.39
SNCAIP-207ENST00000504884 SHMT1P34896 483 aa17.52■□□□□ 0.39
SNCAIP-207ENST00000504884 E2F4Q16254 413 aa17.52■□□□□ 0.39
SNCAIP-207ENST00000504884 INF2Q27J81 1249 aa17.52■□□□□ 0.39
SNCAIP-207ENST00000504884 PRIMPOLQ96LW4 560 aa17.52■□□□□ 0.39
SNCAIP-207ENST00000504884 PIGSQ96S52 555 aa17.52■□□□□ 0.39
SNCAIP-207ENST00000504884 UBA5Q9GZZ9 404 aa17.52■□□□□ 0.39
SNCAIP-207ENST00000504884 ESYT2A0FGR8 921 aa17.51■□□□□ 0.39
SNCAIP-207ENST00000504884 SKILP12757 684 aa17.51■□□□□ 0.39
SNCAIP-207ENST00000504884 RASGRP2Q7LDG7 609 aa17.51■□□□□ 0.39
SNCAIP-207ENST00000504884 TMC6Q7Z403 805 aa17.51■□□□□ 0.39
SNCAIP-207ENST00000504884 KIAA0825Q8IV33 1275 aa17.51■□□□□ 0.39
SNCAIP-207ENST00000504884 C7orf43Q8WVR3 580 aa17.51■□□□□ 0.39
SNCAIP-207ENST00000504884 STK32BQ9NY57 414 aa17.51■□□□□ 0.39
SNCAIP-207ENST00000504884 RGPD3A6NKT7 1758 aaPredicted RBP17.51■□□□□ 0.39
SNCAIP-207ENST00000504884 RGPD4Q7Z3J3 1758 aa17.51■□□□□ 0.39
SNCAIP-207ENST00000504884 PRPHP41219 470 aa17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 NFIAQ12857 509 aa17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 ARID5BQ14865 1188 aa17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 NONOQ15233 471 aaKnown RBP eCLIP17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 CCDC150Q8NCX0 1101 aa17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 IDI2Q9BXS1 227 aa17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 C10orf71Q711Q0 1435 aa17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 NPM3O75607 178 aaKnown RBP17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 CHRNA5P30532 468 aa17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 PDXDC2PQ6P474 469 aa17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 LRRC47Q8N1G4 583 aaKnown RBP17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 SUPT20HQ8NEM7 779 aa17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 SERPINA10Q9UK55 444 aa17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 NFE2L3Q9Y4A8 694 aa17.5■□□□□ 0.39
SNCAIP-207ENST00000504884 FRMPD2Q68DX3 1309 aaPredicted RBP17.49■□□□□ 0.39
SNCAIP-207ENST00000504884 RBM5P52756 815 aaKnown RBP eCLIP17.49■□□□□ 0.39
SNCAIP-207ENST00000504884 FMR1Q06787 632 aaKnown RBP eCLIP17.49■□□□□ 0.39
SNCAIP-207ENST00000504884 EZH2Q15910 746 aaKnown RBP17.49■□□□□ 0.39
SNCAIP-207ENST00000504884 CFAP100Q494V2 611 aa17.49■□□□□ 0.39
SNCAIP-207ENST00000504884 CAMKK2Q96RR4 588 aa17.49■□□□□ 0.39
SNCAIP-207ENST00000504884 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
SNCAIP-207ENST00000504884 PI4KBQ9UBF8 816 aa17.49■□□□□ 0.39
SNCAIP-207ENST00000504884 TNS1Q9HBL0 1735 aaKnown RBP17.49■□□□□ 0.39
SNCAIP-207ENST00000504884 MPHOSPH10O00566 681 aaKnown RBP17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 GTPBP6O43824 516 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 ZNF18P17022 549 aa17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 CDK11BP21127 795 aaKnown RBP17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 EIF6P56537 245 aaKnown RBP17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 CCZ1BP86790 482 aa17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 CCZ1P86791 482 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 ZNF543Q08ER8 600 aa17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 ORC2Q13416 577 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 GPATCH4Q5T3I0 446 aaKnown RBP17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 CCSER1Q9C0I3 900 aa17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 TMEM60Q9H2L4 133 aa17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 ANO8Q9HCE9 1232 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 SLX4Q8IY92 1834 aa17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 NRDCO43847 1150 aa17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 NEK8Q86SG6 692 aa17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 ZFPM1Q8IX07 1006 aa17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 DPF2Q92785 391 aa17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 AK8Q96MA6 479 aa17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 GPCPD1Q9NPB8 672 aa17.48■□□□□ 0.39
SNCAIP-207ENST00000504884 PNMA6FA0A0J9YX94 578 aa17.47■□□□□ 0.39
SNCAIP-207ENST00000504884 SFPQP23246 707 aaKnown RBP eCLIP17.47■□□□□ 0.39
SNCAIP-207ENST00000504884 UBA7P41226 1012 aa17.47■□□□□ 0.39
SNCAIP-207ENST00000504884 EN1Q05925 392 aaPredicted RBP17.47■□□□□ 0.39
SNCAIP-207ENST00000504884 GRIPAP1Q4V328 841 aa17.47■□□□□ 0.39
SNCAIP-207ENST00000504884 REXO1Q8N1G1 1221 aaKnown RBP17.47■□□□□ 0.39
SNCAIP-207ENST00000504884 CCNT1O60563 726 aaKnown RBP17.46■□□□□ 0.39
SNCAIP-207ENST00000504884 CASP1P29466 404 aa17.46■□□□□ 0.39
SNCAIP-207ENST00000504884 STAT6P42226 847 aa17.46■□□□□ 0.39
SNCAIP-207ENST00000504884 AOC3Q16853 763 aa17.46■□□□□ 0.39
SNCAIP-207ENST00000504884 LETM2Q2VYF4 491 aa17.46■□□□□ 0.39
SNCAIP-207ENST00000504884 SPATA1Q5VX52 437 aa17.46■□□□□ 0.39
SNCAIP-207ENST00000504884 RRAGBQ5VZM2 374 aa17.46■□□□□ 0.39
SNCAIP-207ENST00000504884 MED15Q96RN5 788 aa17.46■□□□□ 0.39
SNCAIP-207ENST00000504884 DISC1Q9NRI5 854 aa17.46■□□□□ 0.39
SNCAIP-207ENST00000504884 KCND1Q9NSA2 647 aa17.46■□□□□ 0.39
SNCAIP-207ENST00000504884 RMND1Q9NWS8 449 aa17.46■□□□□ 0.39
SNCAIP-207ENST00000504884 FAM198AQ9UFP1 575 aa17.46■□□□□ 0.39
SNCAIP-207ENST00000504884 MYH8P13535 1937 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms