RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 PPP1R13LQ8WUF5 828 aa5.62□□□□□ -1.51
RFC1-208ENST00000504849 SIRT5Q9NXA8 310 aa5.62□□□□□ -1.51
RFC1-208ENST00000504849 DUSP13Q9UII6 198 aa5.62□□□□□ -1.51
RFC1-208ENST00000504849 INPP5FQ9Y2H2 1132 aa5.62□□□□□ -1.51
RFC1-208ENST00000504849 FFAR3O14843 346 aa5.61□□□□□ -1.51
RFC1-208ENST00000504849 GADD45BO75293 160 aaPredicted RBP5.61□□□□□ -1.51
RFC1-208ENST00000504849 TRIM37O94972 964 aa5.61□□□□□ -1.51
RFC1-208ENST00000504849 FCGRTP55899 365 aa5.61□□□□□ -1.51
RFC1-208ENST00000504849 IGDCC3Q8IVU1 814 aa5.61□□□□□ -1.51
RFC1-208ENST00000504849 MZB1Q8WU39 189 aa5.61□□□□□ -1.51
RFC1-208ENST00000504849 ANP32EQ9BTT0 268 aa5.61□□□□□ -1.51
RFC1-208ENST00000504849 DDX41Q9UJV9 622 aaKnown RBP5.61□□□□□ -1.51
RFC1-208ENST00000504849 SUPT16HQ9Y5B9 1047 aaKnown RBP5.61□□□□□ -1.51
RFC1-208ENST00000504849 PCDHA11Q9Y5I1 949 aa5.61□□□□□ -1.51
RFC1-208ENST00000504849 NESP48681 1621 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 ERCC6L2Q5T890 1561 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 PNMA6FA0A0J9YX94 578 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 CLSTN1O94985 981 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 TNNI2P48788 182 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 SLURP1P55000 103 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 INPP5AQ14642 412 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 RASIP1Q5U651 963 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 CDH24Q86UP0 819 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 PWWP2AQ96N64 755 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 BRINP2Q9C0B6 783 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 OSBPL2Q9H1P3 480 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 ZSWIM4Q9H7M6 989 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 CBX8Q9HC52 389 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 WWC3Q9ULE0 1092 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.6□□□□□ -1.51
RFC1-208ENST00000504849 AK5Q9Y6K8 562 aa5.6□□□□□ -1.51
RFC1-208ENST00000504849 STK10O94804 968 aaKnown RBP5.59□□□□□ -1.51
RFC1-208ENST00000504849 C6P13671 934 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 ACVRL1P37023 503 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 YBX1P67809 324 aaKnown RBP5.59□□□□□ -1.51
RFC1-208ENST00000504849 CHRNEQ04844 493 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 NFE2L2Q16236 605 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 UBXN11Q5T124 520 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 PRAMEF13Q5VWM6 474 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 LRFN4Q6PJG9 635 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 FERMT3Q86UX7 667 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 SPPL2CQ8IUH8 684 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 SIRT2Q8IXJ6 389 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 PMFBP1Q8TBY8 1022 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 LINC01599Q8WXQ3 324 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 G6PC3Q9BUM1 346 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 METTL14Q9HCE5 456 aaKnown RBP5.59□□□□□ -1.51
RFC1-208ENST00000504849 SMPD4Q9NXE4 827 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 PCDHA4Q9UN74 947 aa5.59□□□□□ -1.51
RFC1-208ENST00000504849 RUSC2Q8N2Y8 1516 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 DHX57Q6P158 1386 aaKnown RBP5.58□□□□□ -1.52
RFC1-208ENST00000504849 DISP3Q9P2K9 1392 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 CST3P01034 146 aaPredicted RBP5.58□□□□□ -1.52
RFC1-208ENST00000504849 NEFLP07196 543 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 CYP7A1P22680 504 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 KCNC1P48547 511 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 NOL8Q76FK4 1167 aaKnown RBP5.58□□□□□ -1.52
RFC1-208ENST00000504849 HS2ST1Q7LGA3 356 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 TSPYL5Q86VY4 417 aaPredicted RBP5.58□□□□□ -1.52
RFC1-208ENST00000504849 NLGN1Q8N2Q7 840 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 EPS8L3Q8TE67 593 aaKnown RBP5.58□□□□□ -1.52
RFC1-208ENST00000504849 XAGE3Q8WTP9 111 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 C1QTNF3Q9BXJ4 246 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 GPR62Q9BZJ7 368 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 NIF3L1Q9GZT8 377 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 PIF1Q9H611 641 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 RNF19AQ9NV58 838 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 SPG7Q9UQ90 795 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 ZNF281Q9Y2X9 895 aa5.58□□□□□ -1.52
RFC1-208ENST00000504849 ARID4BQ4LE39 1312 aaPredicted RBP5.57□□□□□ -1.52
RFC1-208ENST00000504849 PRAMEF27A3QJZ7 478 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 MARCH6O60337 910 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 PAGE1O75459 146 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 FGRP09769 529 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 IBSPP21815 317 aaPredicted RBP5.57□□□□□ -1.52
RFC1-208ENST00000504849 HSD3B2P26439 372 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 GJA8P48165 433 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 IGBP1P78318 339 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 PTPROQ16827 1216 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 NBPF6Q5VWK0 638 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 USP48Q86UV5 1035 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 ZFPM1Q8IX07 1006 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 ANKS4BQ8N8V4 417 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 ZCRB1Q8TBF4 217 aaKnown RBP5.57□□□□□ -1.52
RFC1-208ENST00000504849 NBPF4Q96M43 638 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 RBM15Q96T37 977 aaKnown RBP eCLIP5.57□□□□□ -1.52
RFC1-208ENST00000504849 WNT10AQ9GZT5 417 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 PEG3Q9GZU2 1588 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 ERICH3Q5RHP9 1530 aa5.57□□□□□ -1.52
RFC1-208ENST00000504849 hCG_2014768A0A024R1R8 64 aa5.56□□□□□ -1.52
RFC1-208ENST00000504849 CTSHP09668 335 aa5.56□□□□□ -1.52
RFC1-208ENST00000504849 TACR2P21452 398 aa5.56□□□□□ -1.52
RFC1-208ENST00000504849 SDHBP21912 280 aa5.56□□□□□ -1.52
RFC1-208ENST00000504849 RACK1P63244 317 aaKnown RBP5.56□□□□□ -1.52
RFC1-208ENST00000504849 CPZQ66K79 652 aa5.56□□□□□ -1.52
RFC1-208ENST00000504849 MCF2L2Q86YR7 1114 aa5.56□□□□□ -1.52
RFC1-208ENST00000504849 MICAL1Q8TDZ2 1067 aa5.56□□□□□ -1.52
RFC1-208ENST00000504849 ELMO3Q96BJ8 720 aa5.56□□□□□ -1.52
RFC1-208ENST00000504849 NECAB3Q96P71 396 aaPredicted RBP5.56□□□□□ -1.52
RFC1-208ENST00000504849 TRIT1Q9H3H1 467 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms