RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 MTERF4Q7Z6M4 381 aaKnown RBP15.78■□□□□ 0.12
TCOF1-207ENST00000504761 CLEC10AQ8IUN9 316 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 ABCC12Q96J65 1359 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 GAS7O60861 476 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 GYS1P13807 737 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 GUCY1A2P33402 732 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 NEK11Q8NG66 645 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 ZFP91Q96JP5 570 aaPredicted RBP15.78■□□□□ 0.12
TCOF1-207ENST00000504761 BAG1Q99933 345 aaPredicted RBP15.78■□□□□ 0.12
TCOF1-207ENST00000504761 SRRTQ9BXP5 876 aaKnown RBP15.78■□□□□ 0.12
TCOF1-207ENST00000504761 TAOK3Q9H2K8 898 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 FAM170AA1A519 330 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 WTIPA6NIX2 430 aaPredicted RBP15.78■□□□□ 0.12
TCOF1-207ENST00000504761 ERLIN1O75477 346 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 LRMPQ12912 555 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 HS1BP3Q53T59 392 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 MAP7D2Q96T17 732 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 CSADQ9Y600 493 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 CCDC175P0C221 793 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 IRX3P78415 501 aaPredicted RBP15.78■□□□□ 0.12
TCOF1-207ENST00000504761 SEPT2Q15019 361 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 TBC1D10BQ4KMP7 808 aaPredicted RBP15.78■□□□□ 0.12
TCOF1-207ENST00000504761 SYT10Q6XYQ8 523 aa15.78■□□□□ 0.12
TCOF1-207ENST00000504761 SCAF8Q9UPN6 1271 aaKnown RBP15.78■□□□□ 0.12
TCOF1-207ENST00000504761 POTEJP0CG39 1038 aa15.77■□□□□ 0.12
TCOF1-207ENST00000504761 BMP3P12645 472 aa15.77■□□□□ 0.12
TCOF1-207ENST00000504761 RAPGEF1Q13905 1077 aa15.77■□□□□ 0.12
TCOF1-207ENST00000504761 C11orf57Q6ZUT1 292 aaPredicted RBP15.77■□□□□ 0.12
TCOF1-207ENST00000504761 SULF1Q8IWU6 871 aa15.77■□□□□ 0.12
TCOF1-207ENST00000504761 CCPG1Q9ULG6 757 aa15.77■□□□□ 0.12
TCOF1-207ENST00000504761 CAMTA1Q9Y6Y1 1673 aa15.77■□□□□ 0.12
TCOF1-207ENST00000504761 IFT172Q9UG01 1749 aa15.77■□□□□ 0.12
TCOF1-207ENST00000504761 AKR1B15C9JRZ8 316 aaPredicted RBP15.77■□□□□ 0.12
TCOF1-207ENST00000504761 PHACTR2O75167 634 aa15.77■□□□□ 0.12
TCOF1-207ENST00000504761 PAFAH1B1P43034 410 aa15.77■□□□□ 0.12
TCOF1-207ENST00000504761 DCAF15Q66K64 600 aa15.77■□□□□ 0.12
TCOF1-207ENST00000504761 FBXO33Q7Z6M2 555 aa15.77■□□□□ 0.12
TCOF1-207ENST00000504761 GINS2Q9Y248 185 aa15.77■□□□□ 0.12
TCOF1-207ENST00000504761 PNPLA7Q6ZV29 1317 aa15.77■□□□□ 0.12
TCOF1-207ENST00000504761 GOLGA6L9A6NEM1 432 aa15.77■□□□□ 0.11
TCOF1-207ENST00000504761 EZH2Q15910 746 aaKnown RBP15.77■□□□□ 0.11
TCOF1-207ENST00000504761 DPY19L2Q6NUT2 758 aa15.77■□□□□ 0.11
TCOF1-207ENST00000504761 RPAP1Q9BWH6 1393 aaPredicted RBP15.76■□□□□ 0.11
TCOF1-207ENST00000504761 MYCT1Q8N699 235 aa15.76■□□□□ 0.11
TCOF1-207ENST00000504761 HOOK2Q96ED9 719 aa15.76■□□□□ 0.11
TCOF1-207ENST00000504761 GCOM1H8Y6P7 765 aaPredicted RBP15.76■□□□□ 0.11
TCOF1-207ENST00000504761 POLR2MP0CAP2 368 aa15.76■□□□□ 0.11
TCOF1-207ENST00000504761 ANTXR2P58335 489 aa15.76■□□□□ 0.11
TCOF1-207ENST00000504761 LONRF3Q496Y0 759 aa15.76■□□□□ 0.11
TCOF1-207ENST00000504761 SLC39A2Q9NP94 309 aa15.76■□□□□ 0.11
TCOF1-207ENST00000504761 ZBTB12Q9Y330 459 aaPredicted RBP15.76■□□□□ 0.11
TCOF1-207ENST00000504761 ATP6V0A2Q9Y487 856 aa15.76■□□□□ 0.11
TCOF1-207ENST00000504761 PPP6R2O75170 966 aa15.76■□□□□ 0.11
TCOF1-207ENST00000504761 TAF3Q5VWG9 929 aa15.76■□□□□ 0.11
TCOF1-207ENST00000504761 TMCO3Q6UWJ1 677 aa15.76■□□□□ 0.11
TCOF1-207ENST00000504761 STAG2Q8N3U4 1231 aa15.76■□□□□ 0.11
TCOF1-207ENST00000504761 RDH13Q8NBN7 331 aa15.76■□□□□ 0.11
TCOF1-207ENST00000504761 GALNT17Q6IS24 598 aa15.76■□□□□ 0.11
TCOF1-207ENST00000504761 CRAMP1Q96RY5 1269 aa15.76■□□□□ 0.11
TCOF1-207ENST00000504761 HOXA13P31271 388 aaPredicted RBP15.75■□□□□ 0.11
TCOF1-207ENST00000504761 IQCEQ6IPM2 695 aa15.75■□□□□ 0.11
TCOF1-207ENST00000504761 COL23A1Q86Y22 540 aaPredicted RBP15.75■□□□□ 0.11
TCOF1-207ENST00000504761 ALS2CR12Q96Q35 445 aa15.75■□□□□ 0.11
TCOF1-207ENST00000504761 DAGLAQ9Y4D2 1042 aa15.75■□□□□ 0.11
TCOF1-207ENST00000504761 GCNT3O95395 438 aa15.75■□□□□ 0.11
TCOF1-207ENST00000504761 ADKP55263 362 aaKnown RBP15.75■□□□□ 0.11
TCOF1-207ENST00000504761 C12orf60Q5U649 245 aa15.75■□□□□ 0.11
TCOF1-207ENST00000504761 GPBP1Q86WP2 473 aa15.75■□□□□ 0.11
TCOF1-207ENST00000504761 FOXP4Q8IVH2 680 aaPredicted RBP15.75■□□□□ 0.11
TCOF1-207ENST00000504761 CCDC102AQ96A19 550 aa15.75■□□□□ 0.11
TCOF1-207ENST00000504761 B4DLN1 442 aa15.75■□□□□ 0.11
TCOF1-207ENST00000504761 KRT9P35527 623 aa15.75■□□□□ 0.11
TCOF1-207ENST00000504761 SMCR8Q8TEV9 937 aaPredicted RBP15.75■□□□□ 0.11
TCOF1-207ENST00000504761 MRPL11Q9Y3B7 192 aaKnown RBP15.75■□□□□ 0.11
TCOF1-207ENST00000504761 CETN3O15182 167 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 AKR1B1P15121 316 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 PLA2G4DQ86XP0 818 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 MRPL44Q9H9J2 332 aaKnown RBP15.74■□□□□ 0.11
TCOF1-207ENST00000504761 FSD2A1L4K1 749 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 RPL13P26373 211 aaKnown RBP15.74■□□□□ 0.11
TCOF1-207ENST00000504761 CNGA4Q8IV77 575 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 IGDCC4Q8TDY8 1250 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 PLEKHG2Q9H7P9 1386 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 CASP1P29466 404 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 GADL1Q6ZQY3 521 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 SGMS1Q86VZ5 419 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 DCPSQ96C86 337 aaKnown RBP15.74■□□□□ 0.11
TCOF1-207ENST00000504761 ZNF512BQ96KM6 892 aaPredicted RBP15.74■□□□□ 0.11
TCOF1-207ENST00000504761 NRBP1Q9UHY1 535 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 MYO6Q9UM54 1294 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 KIAA1024Q9UPX6 916 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 SHPRHQ149N8 1683 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 KIF28PB7ZC32 967 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
TCOF1-207ENST00000504761 VTI1AQ96AJ9 217 aa15.74■□□□□ 0.11
TCOF1-207ENST00000504761 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.74■□□□□ 0.112e-6■■■■■ 145.4
TCOF1-207ENST00000504761 KIF5AQ12840 1032 aa15.73■□□□□ 0.11
TCOF1-207ENST00000504761 R3HDM1Q15032 1099 aaKnown RBP15.73■□□□□ 0.11
TCOF1-207ENST00000504761 ZNF569Q5MCW4 686 aa15.73■□□□□ 0.11
TCOF1-207ENST00000504761 PAXBP1Q9Y5B6 917 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms