RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.19□□□□□ -1.42
NIPBL-204ENST00000504430 POTECB2RU33 542 aa6.19□□□□□ -1.42
NIPBL-204ENST00000504430 ARSDP51689 593 aa6.19□□□□□ -1.42
NIPBL-204ENST00000504430 MPP2Q14168 576 aa6.19□□□□□ -1.42
NIPBL-204ENST00000504430 CATIPQ7Z7H3 387 aa6.19□□□□□ -1.42
NIPBL-204ENST00000504430 ZSCAN10Q96SZ4 725 aaPredicted RBP6.19□□□□□ -1.42
NIPBL-204ENST00000504430 OSMRQ99650 979 aa6.19□□□□□ -1.42
NIPBL-204ENST00000504430 CBX8Q9HC52 389 aa6.19□□□□□ -1.42
NIPBL-204ENST00000504430 TBK1Q9UHD2 729 aa6.19□□□□□ -1.42
NIPBL-204ENST00000504430 PLD2O14939 933 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 CCND1P24385 295 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 ZNF131P52739 623 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 TRIM32Q13049 653 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 CLN3Q13286 438 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 SF1Q15637 639 aaKnown RBP6.18□□□□□ -1.42
NIPBL-204ENST00000504430 PKN2Q16513 984 aaKnown RBP6.18□□□□□ -1.42
NIPBL-204ENST00000504430 IQSEC1Q6DN90 963 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 UNC5AQ6ZN44 842 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 FAM186BQ8IYM0 893 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 ZSCAN1Q8NBB4 408 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 EHBP1Q8NDI1 1231 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 MGARPQ8TDB4 240 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 SLX1AQ9BQ83 275 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 ANP32EQ9BTT0 268 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 ZC3H12CQ9C0D7 883 aaKnown RBP6.18□□□□□ -1.42
NIPBL-204ENST00000504430 APEX2Q9UBZ4 518 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 FNDC3AQ9Y2H6 1198 aaKnown RBP6.18□□□□□ -1.42
NIPBL-204ENST00000504430 TRAF6Q9Y4K3 522 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 AFG3L2Q9Y4W6 797 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 ANO9A1A5B4 782 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 POTEB2H3BUK9 544 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 SOD2P04179 222 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 TP53P04637 393 aaPredicted RBP6.18□□□□□ -1.42
NIPBL-204ENST00000504430 EIF5P55010 431 aaKnown RBP6.18□□□□□ -1.42
NIPBL-204ENST00000504430 FAM133BQ5BKY9 247 aaKnown RBP6.18□□□□□ -1.42
NIPBL-204ENST00000504430 UNC5DQ6UXZ4 953 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 LRRC3Q9BY71 257 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 ANKEF1Q9NU02 776 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 PPP4R2Q9NY27 417 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 GIMAP2Q9UG22 337 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 TRBV23-1A0A0A0MS06 115 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 FBXO21O94952 628 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 CPP00450 1065 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 ZNF252P-AS1Q0IIN9 211 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 GRB10Q13322 594 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 C4orf17Q53FE4 359 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 SLC10A5Q5PT55 438 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 PPARGC1BQ86YN6 1023 aaKnown RBP6.18□□□□□ -1.42
NIPBL-204ENST00000504430 USP7Q93009 1102 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 GAL3ST3Q96A11 431 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 FUBP3Q96I24 572 aaKnown RBP eCLIP6.18□□□□□ -1.42
NIPBL-204ENST00000504430 PPM1HQ9ULR3 514 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 JAG2Q9Y219 1238 aa6.18□□□□□ -1.42
NIPBL-204ENST00000504430 ERICH4A6NGS2 130 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 LRRC10BA6NIK2 292 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 H2AFYO75367 372 aaKnown RBP6.17□□□□□ -1.42
NIPBL-204ENST00000504430 ATP1A3P13637 1013 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 CACNB2Q08289 660 aaPredicted RBP6.17□□□□□ -1.42
NIPBL-204ENST00000504430 CNGB1Q14028 1251 aaPredicted RBP6.17□□□□□ -1.42
NIPBL-204ENST00000504430 GBX1Q14549 363 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 MINDY4Q4G0A6 757 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 MZT2BQ6NZ67 158 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 CCT6BQ92526 530 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 SLC26A8Q96RN1 970 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 DESI2Q9BSY9 194 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 CARD10Q9BWT7 1032 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 ZCCHC2Q9C0B9 1178 aaKnown RBP6.17□□□□□ -1.42
NIPBL-204ENST00000504430 DNM3Q9UQ16 869 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 HMMRO75330 724 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 RPLP1P05386 114 aaKnown RBP6.17□□□□□ -1.42
NIPBL-204ENST00000504430 GYS1P13807 737 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 IL6STP40189 918 aaPredicted RBP6.17□□□□□ -1.42
NIPBL-204ENST00000504430 RAD52P43351 418 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 HSD17B7P56937 341 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 MPP1Q00013 466 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 MCM10Q7L590 875 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 CCNJLQ8IV13 435 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 LRRC47Q8N1G4 583 aaKnown RBP6.17□□□□□ -1.42
NIPBL-204ENST00000504430 MYCT1Q8N699 235 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 NSUN5Q96P11 429 aaKnown RBP6.17□□□□□ -1.42
NIPBL-204ENST00000504430 SLC9A7Q96T83 725 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 ABCG4Q9H172 646 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 DDX21Q9NR30 783 aaKnown RBP eCLIP6.17□□□□□ -1.42
NIPBL-204ENST00000504430 TRAK1Q9UPV9 953 aa6.17□□□□□ -1.42
NIPBL-204ENST00000504430 H3BRJ5 948 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 MMP20O60882 483 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 RLBP1P12271 317 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 ARSJQ5FYB0 599 aaPredicted RBP6.16□□□□□ -1.42
NIPBL-204ENST00000504430 UBE2Q1Q7Z7E8 422 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 CPA6Q8N4T0 437 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 ZFPM2Q8WW38 1151 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 TNIP3Q96KP6 325 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 MS4A5Q9H3V2 200 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 IFT80Q9P2H3 777 aaPredicted RBP6.16□□□□□ -1.42
NIPBL-204ENST00000504430 ZNF652Q9Y2D9 606 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 SNUPNO95149 360 aaKnown RBP6.16□□□□□ -1.42
NIPBL-204ENST00000504430 LPOP22079 712 aaPredicted RBP6.16□□□□□ -1.42
NIPBL-204ENST00000504430 ADCYAP1R1P41586 468 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 GNPTABQ3T906 1256 aa6.16□□□□□ -1.42
NIPBL-204ENST00000504430 CDK5RAP3Q96JB5 506 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms