RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 DMTNQ08495 405 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 PAK1Q13153 545 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 ZNF174Q15697 407 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 FAM98CQ17RN3 349 aaKnown RBP4.39□□□□□ -1.71
ALYREF-201ENST00000504015 CRY2Q49AN0 593 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 TCP11X2Q5H9J9 407 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 RRAGBQ5VZM2 374 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 WWC2Q6AWC2 1192 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 MCTP2Q6DN12 878 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 CYP26C1Q6V0L0 522 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 BICDL1Q6ZP65 573 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 ZNF662Q6ZS27 426 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 PIK3AP1Q6ZUJ8 805 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 ARHGAP27Q6ZUM4 889 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 C16orf86Q6ZW13 317 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 USP49Q70CQ1 688 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 RASGRP2Q7LDG7 609 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 TEX2Q8IWB9 1127 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 FAM114A1Q8IWE2 563 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 KRT222Q8N1A0 295 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 MSL3Q8N5Y2 521 aaKnown RBP4.39□□□□□ -1.71
ALYREF-201ENST00000504015 CEP112Q8N8E3 955 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 IGSF22Q8N9C0 903 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 NEDD1Q8NHV4 660 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 TSC1Q92574 1164 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 RABGGTAQ92696 567 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 RPGRQ92834 1020 aaKnown RBP4.39□□□□□ -1.71
ALYREF-201ENST00000504015 ARHGEF1Q92888 912 aaKnown RBP4.39□□□□□ -1.71
ALYREF-201ENST00000504015 SHISA4Q96DD7 197 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 RRP36Q96EU6 259 aaKnown RBP4.39□□□□□ -1.71
ALYREF-201ENST00000504015 DHTKD1Q96HY7 919 aaPredicted RBP4.39□□□□□ -1.71
ALYREF-201ENST00000504015 NGLY1Q96IV0 654 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 MED15Q96RN5 788 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 CRAMP1Q96RY5 1269 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 NAP1L4Q99733 375 aaKnown RBP4.39□□□□□ -1.71
ALYREF-201ENST00000504015 NUP58Q9BVL2 599 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 THAP9Q9H5L6 903 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 C6orf50Q9HD87 102 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 DISC1Q9NRI5 854 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 IL17RBQ9NRM6 502 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 SAMSN1Q9NSI8 373 aaKnown RBP4.39□□□□□ -1.71
ALYREF-201ENST00000504015 KBTBD4Q9NVX7 518 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 PODXL2Q9NZ53 605 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 TFCP2L1Q9NZI6 479 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 ANKIB1Q9P2G1 1089 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 MAD2L2Q9UI95 211 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 CCNL1Q9UK58 526 aaPredicted RBP4.39□□□□□ -1.71
ALYREF-201ENST00000504015 FAM205AQ6ZU69 1335 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 MYO3BQ8WXR4 1341 aa4.39□□□□□ -1.71
ALYREF-201ENST00000504015 DDX60LQ5H9U9 1706 aaKnown RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 FOCADQ5VW36 1801 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 FAM205CA6NFA0 338 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 NUTM2BA6NNL0 878 aaPredicted RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 NUTM2EB1AL46 878 aaPredicted RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 KLRF2D3W0D1 207 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 STXBP3O00186 592 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 N4BP3O15049 544 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 ONECUT3O60422 494 aaPredicted RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 MFAP3LO75121 409 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 TADA3O75528 432 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 FGFR1OPO95684 399 aaKnown RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 PARP1P09874 1014 aaKnown RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 OR52Z1P0C646 297 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 USP17L8P0C7I0 530 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 CD44P16070 742 aaKnown RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 ZSCAN20P17040 1043 aaPredicted RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 RASA1P20936 1047 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 DNM2P50570 870 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 COPB1P53618 953 aaKnown RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 ADKP55263 362 aaKnown RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 ST5P78524 1137 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 CDK17Q00537 523 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 RBL2Q08999 1139 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 PSMD2Q13200 908 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 PDIA5Q14554 519 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 SEPT2Q15019 361 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 NONOQ15233 471 aaKnown RBP eCLIP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 IL17AQ16552 155 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 TSR1Q2NL82 804 aaKnown RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 KMT5BQ4FZB7 885 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 ASPRV1Q53RT3 343 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 FIGNQ5HY92 759 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 EARS2Q5JPH6 523 aaKnown RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 FAM47AQ5JRC9 791 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 SLC27A3Q5K4L6 730 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 SOGA3Q5TF21 947 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 PPP1R18Q6NYC8 613 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 CNNM4Q6P4Q7 775 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 TMCO3Q6UWJ1 677 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 NEK8Q86SG6 692 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 TRMT44Q8IYL2 757 aaKnown RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 GRAMD1CQ8IYS0 662 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 ADSSL1Q8N142 457 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 CNBD1Q8NA66 436 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 GIMAP8Q8ND71 665 aaPredicted RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 SH3RF3Q8TEJ3 882 aaPredicted RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 RBM17Q96I25 401 aaKnown RBP4.38□□□□□ -1.71
ALYREF-201ENST00000504015 C7orf25Q9BPX7 421 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 TMEM47Q9BQJ4 181 aa4.38□□□□□ -1.71
ALYREF-201ENST00000504015 RTFDC1Q9BY42 306 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms