RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 CPXCR1Q8N123 301 aa23.07■■□□□ 1.28
UBE2D3-215ENST00000503418 CHMP4CQ96CF2 233 aa23.07■■□□□ 1.28
UBE2D3-215ENST00000503418 INCENPQ9NQS7 918 aa23.07■■□□□ 1.28
UBE2D3-215ENST00000503418 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.07■■□□□ 1.281e-8■□□□□ 9.1
UBE2D3-215ENST00000503418 SYN1P17600 705 aa23.06■■□□□ 1.28
UBE2D3-215ENST00000503418 CHD1LQ86WJ1 897 aa23.06■■□□□ 1.28
UBE2D3-215ENST00000503418 FEM1BQ9UK73 627 aa23.06■■□□□ 1.28
UBE2D3-215ENST00000503418 STX8Q9UNK0 236 aa23.06■■□□□ 1.28
UBE2D3-215ENST00000503418 SEPT4O43236 478 aa23.05■■□□□ 1.28
UBE2D3-215ENST00000503418 RANBP6O60518 1105 aaKnown RBP23.05■■□□□ 1.28
UBE2D3-215ENST00000503418 BMP3P12645 472 aa23.05■■□□□ 1.28
UBE2D3-215ENST00000503418 NMIQ13287 307 aaPredicted RBP23.05■■□□□ 1.28
UBE2D3-215ENST00000503418 LRRC26Q2I0M4 334 aa23.05■■□□□ 1.28
UBE2D3-215ENST00000503418 SENP6Q9GZR1 1112 aaPredicted RBP23.05■■□□□ 1.28
UBE2D3-215ENST00000503418 PRO3102Q9H379 93 aa23.05■■□□□ 1.28
UBE2D3-215ENST00000503418 RIPK3Q9Y572 518 aa23.05■■□□□ 1.28
UBE2D3-215ENST00000503418 MYCNP04198 464 aaPredicted RBP23.04■■□□□ 1.28
UBE2D3-215ENST00000503418 NUCB1Q02818 461 aa23.04■■□□□ 1.28
UBE2D3-215ENST00000503418 IKQ13123 557 aaPredicted RBP23.04■■□□□ 1.28
UBE2D3-215ENST00000503418 ALX1Q15699 326 aa23.04■■□□□ 1.28
UBE2D3-215ENST00000503418 PPP4R3BQ5MIZ7 849 aa23.04■■□□□ 1.28
UBE2D3-215ENST00000503418 ZNF589Q86UQ0 364 aaPredicted RBP23.04■■□□□ 1.28
UBE2D3-215ENST00000503418 RAVER2Q9HCJ3 691 aaKnown RBP23.04■■□□□ 1.28
UBE2D3-215ENST00000503418 TOMM22Q9NS69 142 aa23.04■■□□□ 1.28
UBE2D3-215ENST00000503418 ANAPC4Q9UJX5 808 aa23.04■■□□□ 1.28
UBE2D3-215ENST00000503418 TMEM232C9JQI7 657 aa23.03■■□□□ 1.28
UBE2D3-215ENST00000503418 DNM1LO00429 736 aa23.03■■□□□ 1.28
UBE2D3-215ENST00000503418 NMT2O60551 498 aa23.03■■□□□ 1.28
UBE2D3-215ENST00000503418 ZNF792Q3KQV3 632 aa23.03■■□□□ 1.28
UBE2D3-215ENST00000503418 GJC2Q5T442 439 aaPredicted RBP23.03■■□□□ 1.28
UBE2D3-215ENST00000503418 PLEKHM2Q8IWE5 1019 aa23.03■■□□□ 1.28
UBE2D3-215ENST00000503418 DDX11Q96FC9 970 aa23.03■■□□□ 1.28
UBE2D3-215ENST00000503418 SLC38A10Q9HBR0 1119 aa23.03■■□□□ 1.28
UBE2D3-215ENST00000503418 DIS3Q9Y2L1 958 aaKnown RBP23.03■■□□□ 1.28
UBE2D3-215ENST00000503418 TACC3Q9Y6A5 838 aa23.03■■□□□ 1.28
UBE2D3-215ENST00000503418 FGAP02671 866 aa23.02■■□□□ 1.28
UBE2D3-215ENST00000503418 HSPD1P10809 573 aaKnown RBP23.02■■□□□ 1.28
UBE2D3-215ENST00000503418 SLC1A4P43007 532 aa23.02■■□□□ 1.28
UBE2D3-215ENST00000503418 STAT2P52630 851 aa23.02■■□□□ 1.28
UBE2D3-215ENST00000503418 RRP12Q5JTH9 1297 aaKnown RBP23.02■■□□□ 1.28
UBE2D3-215ENST00000503418 TICAM2Q86XR7 235 aa23.02■■□□□ 1.28
UBE2D3-215ENST00000503418 ARRDC4Q8NCT1 418 aa23.02■■□□□ 1.28
UBE2D3-215ENST00000503418 TINF2Q9BSI4 451 aa23.02■■□□□ 1.28
UBE2D3-215ENST00000503418 IL17RBQ9NRM6 502 aa23.02■■□□□ 1.28
UBE2D3-215ENST00000503418 MTMR7Q9Y216 660 aa23.02■■□□□ 1.28
UBE2D3-215ENST00000503418 SUPT16HQ9Y5B9 1047 aaKnown RBP23.02■■□□□ 1.28
UBE2D3-215ENST00000503418 SMCHD1A6NHR9 2005 aa23.02■■□□□ 1.28
UBE2D3-215ENST00000503418 CCDC171Q6TFL3 1326 aa23.02■■□□□ 1.28
UBE2D3-215ENST00000503418 KBTBD13C9JR72 458 aa23.01■■□□□ 1.27
UBE2D3-215ENST00000503418 ATP2A1O14983 1001 aa23.01■■□□□ 1.27
UBE2D3-215ENST00000503418 MCCP23508 829 aa23.01■■□□□ 1.27
UBE2D3-215ENST00000503418 ATN1P54259 1190 aaPredicted RBP23.01■■□□□ 1.27
UBE2D3-215ENST00000503418 GMCL1Q96IK5 515 aa23.01■■□□□ 1.27
UBE2D3-215ENST00000503418 RANBP2P49792 3224 aaKnown RBP23.01■■□□□ 1.27
UBE2D3-215ENST00000503418 ORC4O43929 436 aa23■■□□□ 1.27
UBE2D3-215ENST00000503418 HAND2P61296 217 aa23■■□□□ 1.27
UBE2D3-215ENST00000503418 FAM160B2Q86V87 743 aa23■■□□□ 1.27
UBE2D3-215ENST00000503418 CHURC1Q8WUH1 139 aa23■■□□□ 1.27
UBE2D3-215ENST00000503418 OSBPL3Q9H4L5 887 aa23■■□□□ 1.27
UBE2D3-215ENST00000503418 PCDH10Q9P2E7 1040 aa23■■□□□ 1.27
UBE2D3-215ENST00000503418 SDSP20132 328 aa22.99■■□□□ 1.27
UBE2D3-215ENST00000503418 OAZ1P54368 228 aa22.99■■□□□ 1.27
UBE2D3-215ENST00000503418 KCTD1Q719H9 257 aa22.99■■□□□ 1.27
UBE2D3-215ENST00000503418 STAG1Q8WVM7 1258 aa22.99■■□□□ 1.27
UBE2D3-215ENST00000503418 GDF15Q99988 308 aa22.99■■□□□ 1.27
UBE2D3-215ENST00000503418 HOMER2Q9NSB8 354 aa22.99■■□□□ 1.27
UBE2D3-215ENST00000503418 NRBP1Q9UHY1 535 aa22.99■■□□□ 1.27
UBE2D3-215ENST00000503418 A0A1W2PPC1 479 aa22.98■■□□□ 1.27
UBE2D3-215ENST00000503418 FDX1P10109 184 aa22.98■■□□□ 1.27
UBE2D3-215ENST00000503418 TAL1P17542 331 aaPredicted RBP22.98■■□□□ 1.27
UBE2D3-215ENST00000503418 MAGEA10P43363 369 aaPredicted RBP22.98■■□□□ 1.27
UBE2D3-215ENST00000503418 MFAP1P55081 439 aaKnown RBP22.98■■□□□ 1.27
UBE2D3-215ENST00000503418 RASGRP2Q7LDG7 609 aa22.98■■□□□ 1.27
UBE2D3-215ENST00000503418 ANKRD35Q8N283 1001 aa22.98■■□□□ 1.27
UBE2D3-215ENST00000503418 FBXO40Q9UH90 709 aa22.98■■□□□ 1.27
UBE2D3-215ENST00000503418 CNPY2Q9Y2B0 182 aa22.98■■□□□ 1.27
UBE2D3-215ENST00000503418 DNAH12Q6ZR08 3092 aa22.98■■□□□ 1.27
UBE2D3-215ENST00000503418 ZMYM6O95789 1325 aa22.98■■□□□ 1.27
UBE2D3-215ENST00000503418 FGRP09769 529 aa22.97■■□□□ 1.27
UBE2D3-215ENST00000503418 RARBP10826 455 aa22.97■■□□□ 1.27
UBE2D3-215ENST00000503418 CCDC96Q2M329 555 aa22.97■■□□□ 1.27
UBE2D3-215ENST00000503418 CHST13Q8NET6 341 aa22.97■■□□□ 1.27
UBE2D3-215ENST00000503418 DIAPH3Q9NSV4 1193 aa22.97■■□□□ 1.27
UBE2D3-215ENST00000503418 MCM3APO60318 1980 aa22.96■■□□□ 1.27
UBE2D3-215ENST00000503418 DNAJC25-GNG10A0A024R161 153 aa22.96■■□□□ 1.27
UBE2D3-215ENST00000503418 LRRC41Q15345 812 aa22.96■■□□□ 1.27
UBE2D3-215ENST00000503418 RCSD1Q6JBY9 416 aa22.96■■□□□ 1.27
UBE2D3-215ENST00000503418 CWC27Q6UX04 472 aaKnown RBP22.96■■□□□ 1.27
UBE2D3-215ENST00000503418 XPNPEP3Q9NQH7 507 aa22.96■■□□□ 1.27
UBE2D3-215ENST00000503418 ZNF865P0CJ78 1059 aaPredicted RBP22.95■■□□□ 1.26
UBE2D3-215ENST00000503418 AKR1A1P14550 325 aa22.95■■□□□ 1.26
UBE2D3-215ENST00000503418 BMP8BP34820 402 aa22.95■■□□□ 1.26
UBE2D3-215ENST00000503418 RTP1P59025 263 aa22.95■■□□□ 1.26
UBE2D3-215ENST00000503418 CCDC174Q6PII3 467 aa22.95■■□□□ 1.26
UBE2D3-215ENST00000503418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.95■■□□□ 1.26
UBE2D3-215ENST00000503418 MSL3Q8N5Y2 521 aaKnown RBP22.95■■□□□ 1.26
UBE2D3-215ENST00000503418 LENG1Q96BZ8 264 aaPredicted RBP22.95■■□□□ 1.26
UBE2D3-215ENST00000503418 AGBL1Q96MI9 1066 aa22.95■■□□□ 1.26
UBE2D3-215ENST00000503418 SYNGAP1Q96PV0 1343 aa22.95■■□□□ 1.26
UBE2D3-215ENST00000503418 ZHX1Q9UKY1 873 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms