RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 TOP1P11387 765 aaKnown RBP13.17□□□□□ -0.3
USP46-204ENST00000503060 NOVP48745 357 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 GABPAQ06546 454 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 ISM2Q6H9L7 571 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 HHIPL2Q6UWX4 724 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 PIK3AP1Q6ZUJ8 805 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 USP49Q70CQ1 688 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 GET4Q7L5D6 327 aaPredicted RBP13.17□□□□□ -0.3
USP46-204ENST00000503060 CCDC186Q7Z3E2 898 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 FOXP4Q8IVH2 680 aaPredicted RBP13.17□□□□□ -0.3
USP46-204ENST00000503060 CEP95Q96GE4 821 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 DDX4Q9NQI0 724 aaKnown RBP13.17□□□□□ -0.3
USP46-204ENST00000503060 USP40Q9NVE5 1235 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 SERTAD1Q9UHV2 236 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 PCDHA4Q9UN74 947 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 SMTNL1A8MU46 457 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 FOXN1O15353 648 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 SCNN1DP51172 638 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 MTA1Q13330 715 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 WDR78Q5VTH9 848 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 PODNQ7Z5L7 613 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 PCDHA5Q9Y5H7 936 aa13.17□□□□□ -0.3
USP46-204ENST00000503060 PLIN4Q96Q06 1357 aa13.16□□□□□ -0.3
USP46-204ENST00000503060 KLRF2D3W0D1 207 aa13.16□□□□□ -0.3
USP46-204ENST00000503060 ACTN4O43707 911 aaKnown RBP13.16□□□□□ -0.3
USP46-204ENST00000503060 KIF4AO95239 1232 aa13.16□□□□□ -0.3
USP46-204ENST00000503060 PARP1P09874 1014 aaKnown RBP13.16□□□□□ -0.3
USP46-204ENST00000503060 ATP2C1P98194 919 aaPredicted RBP13.16□□□□□ -0.3
USP46-204ENST00000503060 NCAPHQ15003 741 aa13.16□□□□□ -0.3
USP46-204ENST00000503060 WWC2Q6AWC2 1192 aa13.16□□□□□ -0.3
USP46-204ENST00000503060 TYW1BQ6NUM6 668 aa13.16□□□□□ -0.3
USP46-204ENST00000503060 MAMSTRQ6ZN01 415 aa13.16□□□□□ -0.3
USP46-204ENST00000503060 ZNF513Q8N8E2 541 aaPredicted RBP13.16□□□□□ -0.3
USP46-204ENST00000503060 TEKT1Q969V4 418 aa13.16□□□□□ -0.3
USP46-204ENST00000503060 SPZ1Q9BXG8 430 aa13.16□□□□□ -0.3
USP46-204ENST00000503060 DBNDD1Q9H9R9 158 aa13.16□□□□□ -0.3
USP46-204ENST00000503060 NRBP1Q9UHY1 535 aa13.16□□□□□ -0.3
USP46-204ENST00000503060 FEZ2Q9UHY8 353 aaPredicted RBP13.16□□□□□ -0.3
USP46-204ENST00000503060 IKBKBO14920 756 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 GOLGA8HP0CJ92 632 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 PTGDRQ13258 359 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 POSTNQ15063 836 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 CDC42EP5Q6NZY7 148 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 ANKRD23Q86SG2 305 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 CCDC148Q8NFR7 591 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 ADAMTSL1Q8N6G6 1762 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 STXBP3O00186 592 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 TPM4P67936 248 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 TAF3Q5VWG9 929 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 APOBEC3HQ6NTF7 200 aaKnown RBP13.15□□□□□ -0.3
USP46-204ENST00000503060 KANK3Q6NY19 840 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 RASGRP2Q7LDG7 609 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 HEATR3Q7Z4Q2 680 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 CACTIN-AS1Q8N1I8 211 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 PDILTQ8N807 584 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 DAGLBQ8NCG7 672 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 BARHL2Q9NY43 387 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 PYCARDQ9ULZ3 195 aa13.15□□□□□ -0.3
USP46-204ENST00000503060 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 MAP2K1Q02750 393 aaPredicted RBP13.14□□□□□ -0.31
USP46-204ENST00000503060 NOLC1Q14978 699 aaKnown RBP eCLIP13.14□□□□□ -0.31
USP46-204ENST00000503060 SLC15A2Q16348 729 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 GALNT17Q6IS24 598 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 KIAA1524Q8TCG1 905 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 SYMPKQ92797 1274 aaKnown RBP13.14□□□□□ -0.31
USP46-204ENST00000503060 EPSTI1Q96J88 318 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 OSBPL5Q9H0X9 879 aaPredicted RBP13.14□□□□□ -0.31
USP46-204ENST00000503060 YY1AP1Q9H869 796 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 KCNQ5Q9NR82 932 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 MAGEC2Q9UBF1 373 aaPredicted RBP13.14□□□□□ -0.31
USP46-204ENST00000503060 M0R2N6 131 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 AKR1B1P15121 316 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 PAX3P23760 479 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 SMARCA1P28370 1054 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 CHRNA5P30532 468 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 SSR1P43307 286 aaKnown RBP13.14□□□□□ -0.31
USP46-204ENST00000503060 CRKP46108 304 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 CCDC144BQ3MJ40 725 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 NT5DC1Q5TFE4 455 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 USP17L2Q6R6M4 530 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 C17orf53Q8N3J3 647 aaPredicted RBP13.14□□□□□ -0.31
USP46-204ENST00000503060 MTMR4Q9NYA4 1195 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 SWAP70Q9UH65 585 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 MAN1B1Q9UKM7 699 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 SLX4Q8IY92 1834 aa13.14□□□□□ -0.31
USP46-204ENST00000503060 MYO3BQ8WXR4 1341 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 A0A087X0B3 334 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 IGKV6D-41A0A0C4DH26 115 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 VWA3AA6NCI4 1184 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 MCM7P33993 719 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 FKBP1AP62942 108 aaKnown RBP13.13□□□□□ -0.31
USP46-204ENST00000503060 RASGRP4Q8TDF6 673 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 CNKSR1Q969H4 720 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 DHX58Q96C10 678 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 CPVLQ9H3G5 476 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 SPTLC3Q9NUV7 552 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
USP46-204ENST00000503060 SERPINB13Q9UIV8 391 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 PCDHA6Q9UN73 950 aa13.13□□□□□ -0.31
USP46-204ENST00000503060 PCDHA8Q9Y5H6 950 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms