RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 PRKAG2Q9UGJ0 569 aa12.82□□□□□ -0.36
SNCA-207ENST00000502987 MYH4Q9Y623 1939 aa12.82□□□□□ -0.36
SNCA-207ENST00000502987 SMCHD1A6NHR9 2005 aa12.81□□□□□ -0.36
SNCA-207ENST00000502987 PARP14Q460N5 1801 aa12.81□□□□□ -0.36
SNCA-207ENST00000502987 SOX1O00570 391 aaPredicted RBP12.81□□□□□ -0.36
SNCA-207ENST00000502987 ERC2O15083 957 aa12.81□□□□□ -0.36
SNCA-207ENST00000502987 GPAA1O43292 621 aa12.81□□□□□ -0.36
SNCA-207ENST00000502987 CYBAP13498 195 aa12.81□□□□□ -0.36
SNCA-207ENST00000502987 GNAT2P19087 354 aa12.81□□□□□ -0.36
SNCA-207ENST00000502987 STAT3P40763 770 aa12.81□□□□□ -0.36
SNCA-207ENST00000502987 KCTD2Q14681 263 aa12.81□□□□□ -0.36
SNCA-207ENST00000502987 SBK1Q52WX2 424 aa12.81□□□□□ -0.36
SNCA-207ENST00000502987 GIMAP6Q6P9H5 292 aa12.81□□□□□ -0.36
SNCA-207ENST00000502987 ABRAQ8N0Z2 381 aa12.81□□□□□ -0.36
SNCA-207ENST00000502987 ZNF287Q9HBT7 754 aa12.81□□□□□ -0.36
SNCA-207ENST00000502987 CLIP2Q9UDT6 1046 aa12.81□□□□□ -0.36
SNCA-207ENST00000502987 ISY1Q9ULR0 285 aaKnown RBP12.81□□□□□ -0.36
SNCA-207ENST00000502987 PLXNA1Q9UIW2 1896 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 A0A0G2JMZ2 1700 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 DNM1LO00429 736 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 VWA5AO00534 786 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 SEPT4O43236 478 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 PGK2P07205 417 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 RASA1P20936 1047 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 EMP3P54852 163 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 RIOX2Q8IUF8 465 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 TDHQ8IZJ6 230 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 MAML3Q96JK9 1138 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 NUP88Q99567 741 aaPredicted RBP12.8□□□□□ -0.36
SNCA-207ENST00000502987 FSD1Q9BTV5 496 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 NACAP1Q9BZK3 213 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 PPP1R9AQ9ULJ8 1098 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 ATP11BQ9Y2G3 1177 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 ZNF236Q9UL36 1845 aa12.8□□□□□ -0.36
SNCA-207ENST00000502987 PATL2C9JE40 543 aaKnown RBP12.79□□□□□ -0.36
SNCA-207ENST00000502987 F5H6K3 240 aa12.79□□□□□ -0.36
SNCA-207ENST00000502987 M0R2C6 588 aa12.79□□□□□ -0.36
SNCA-207ENST00000502987 ZBED4O75132 1171 aa12.79□□□□□ -0.36
SNCA-207ENST00000502987 PRDM1O75626 825 aa12.79□□□□□ -0.36
SNCA-207ENST00000502987 SLC3A2P08195 630 aaKnown RBP12.79□□□□□ -0.36
SNCA-207ENST00000502987 RTP1P59025 263 aa12.79□□□□□ -0.36
SNCA-207ENST00000502987 KLRC3Q07444 240 aa12.79□□□□□ -0.36
SNCA-207ENST00000502987 SPNS2Q8IVW8 549 aa12.79□□□□□ -0.36
SNCA-207ENST00000502987 CPXCR1Q8N123 301 aa12.79□□□□□ -0.36
SNCA-207ENST00000502987 DDX11Q96FC9 970 aa12.79□□□□□ -0.36
SNCA-207ENST00000502987 SLF1Q9BQI6 1058 aa12.79□□□□□ -0.36
SNCA-207ENST00000502987 NYAP2Q9P242 653 aa12.79□□□□□ -0.36
SNCA-207ENST00000502987 TSPY3P0CV98 308 aa12.78□□□□□ -0.36
SNCA-207ENST00000502987 TSPY8P0CW00 308 aa12.78□□□□□ -0.36
SNCA-207ENST00000502987 COPB2P35606 906 aa12.78□□□□□ -0.36
SNCA-207ENST00000502987 ADCYAP1R1P41586 468 aa12.78□□□□□ -0.36
SNCA-207ENST00000502987 PDE4BQ07343 736 aa12.78□□□□□ -0.36
SNCA-207ENST00000502987 SNRNP48Q6IEG0 339 aaKnown RBP12.78□□□□□ -0.36
SNCA-207ENST00000502987 IFNL3Q8IZI9 196 aa12.78□□□□□ -0.36
SNCA-207ENST00000502987 PRPF38AQ8NAV1 312 aaKnown RBP12.78□□□□□ -0.36
SNCA-207ENST00000502987 FERMT2Q96AC1 680 aa12.78□□□□□ -0.36
SNCA-207ENST00000502987 KIFC2Q96AC6 838 aa12.78□□□□□ -0.36
SNCA-207ENST00000502987 SEC62Q99442 399 aaKnown RBP12.78□□□□□ -0.36
SNCA-207ENST00000502987 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNCA-207ENST00000502987 NAPBQ9H115 298 aa12.78□□□□□ -0.36
SNCA-207ENST00000502987 PRDM5Q9NQX1 630 aaPredicted RBP12.78□□□□□ -0.36
SNCA-207ENST00000502987 ADAMTS5Q9UNA0 930 aa12.78□□□□□ -0.36
SNCA-207ENST00000502987 PCDHB15Q9Y5E8 787 aa12.78□□□□□ -0.36
SNCA-207ENST00000502987 TTC41PQ6P2S7 1318 aa12.78□□□□□ -0.36
SNCA-207ENST00000502987 LAMA2P24043 3122 aaKnown RBP12.77□□□□□ -0.37
SNCA-207ENST00000502987 NDUFB10O96000 172 aa12.77□□□□□ -0.37
SNCA-207ENST00000502987 RARBP10826 455 aa12.77□□□□□ -0.37
SNCA-207ENST00000502987 SLC39A5Q6ZMH5 540 aa12.77□□□□□ -0.37
SNCA-207ENST00000502987 DEFB123Q8N688 67 aa12.77□□□□□ -0.37
SNCA-207ENST00000502987 CHMP4CQ96CF2 233 aa12.77□□□□□ -0.37
SNCA-207ENST00000502987 TINF2Q9BSI4 451 aa12.77□□□□□ -0.37
SNCA-207ENST00000502987 EPB41L4AQ9HCS5 686 aaPredicted RBP12.77□□□□□ -0.37
SNCA-207ENST00000502987 CNPY2Q9Y2B0 182 aa12.77□□□□□ -0.37
SNCA-207ENST00000502987 BOLA1Q9Y3E2 137 aa12.77□□□□□ -0.37
SNCA-207ENST00000502987 TTLL1O95922 423 aa12.76□□□□□ -0.37
SNCA-207ENST00000502987 IKQ13123 557 aaPredicted RBP12.76□□□□□ -0.37
SNCA-207ENST00000502987 MMRN1Q13201 1228 aa12.76□□□□□ -0.37
SNCA-207ENST00000502987 LRRC41Q15345 812 aa12.76□□□□□ -0.37
SNCA-207ENST00000502987 ZNF792Q3KQV3 632 aa12.76□□□□□ -0.37
SNCA-207ENST00000502987 LRIT3Q3SXY7 679 aa12.76□□□□□ -0.37
SNCA-207ENST00000502987 FAM47AQ5JRC9 791 aa12.76□□□□□ -0.37
SNCA-207ENST00000502987 ANKRD45Q5TZF3 282 aa12.76□□□□□ -0.37
SNCA-207ENST00000502987 SLC17A8Q8NDX2 589 aa12.76□□□□□ -0.37
SNCA-207ENST00000502987 OTUD7AQ8TE49 926 aaPredicted RBP12.76□□□□□ -0.37
SNCA-207ENST00000502987 CEP95Q96GE4 821 aa12.76□□□□□ -0.37
SNCA-207ENST00000502987 TEX13BQ9BXU2 312 aa12.76□□□□□ -0.37
SNCA-207ENST00000502987 XPNPEP3Q9NQH7 507 aa12.76□□□□□ -0.37
SNCA-207ENST00000502987 ZNF214Q9UL59 606 aaPredicted RBP12.76□□□□□ -0.37
SNCA-207ENST00000502987 DIS3Q9Y2L1 958 aaKnown RBP12.76□□□□□ -0.37
SNCA-207ENST00000502987 LAMA3Q16787 3333 aa12.76□□□□□ -0.37
SNCA-207ENST00000502987 IGHA2P01877 340 aa12.75□□□□□ -0.37
SNCA-207ENST00000502987 TAL1P17542 331 aaPredicted RBP12.75□□□□□ -0.37
SNCA-207ENST00000502987 MX1P20591 662 aa12.75□□□□□ -0.37
SNCA-207ENST00000502987 TFAP4Q01664 338 aa12.75□□□□□ -0.37
SNCA-207ENST00000502987 Q7L0L9 218 aa12.75□□□□□ -0.37
SNCA-207ENST00000502987 RNF180Q86T96 592 aa12.75□□□□□ -0.37
SNCA-207ENST00000502987 LRRC47Q8N1G4 583 aaKnown RBP12.75□□□□□ -0.37
SNCA-207ENST00000502987 ANKRD35Q8N283 1001 aa12.75□□□□□ -0.37
SNCA-207ENST00000502987 GREB1LQ9C091 1923 aaPredicted RBP12.75□□□□□ -0.37
SNCA-207ENST00000502987 RAVER2Q9HCJ3 691 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms