RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 CLIC6Q96NY7 704 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 RUFY1Q96T51 708 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 CDC5LQ99459 802 aaKnown RBP12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 GPBP1L1Q9HC44 474 aaPredicted RBP12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 RNF216Q9NWF9 866 aaPredicted RBP12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 ZNHIT6Q9NWK9 470 aaKnown RBP12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 SERTAD1Q9UHV2 236 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 NID2Q14112 1375 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 TEX33O43247 280 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 ACTN4O43707 911 aaKnown RBP12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 NDUFA10O95299 355 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 IPO7O95373 1038 aaKnown RBP12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 RCAN1P53805 252 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 EPHA10Q5JZY3 1008 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 ARHGAP27Q6ZUM4 889 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 LRP10Q7Z4F1 713 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 SGMS1Q86VZ5 419 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 AENQ8WTP8 325 aaKnown RBP12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 APPBP2Q92624 585 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 XAGE2Q96GT9 111 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 MYD88Q99836 296 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 MTA3Q9BTC8 594 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 AATFQ9NY61 560 aaKnown RBP eCLIP12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 SUFUQ9UMX1 484 aa12.34□□□□□ -0.43
AC055717.1-201ENST00000502221 FGAP02671 866 aa12.33□□□□□ -0.44
AC055717.1-201ENST00000502221 CYLC1P35663 651 aaPredicted RBP12.33□□□□□ -0.44
AC055717.1-201ENST00000502221 EPHB4P54760 987 aa12.33□□□□□ -0.44
AC055717.1-201ENST00000502221 GNGT1P63211 74 aa12.33□□□□□ -0.44
AC055717.1-201ENST00000502221 AIMP1Q12904 312 aaKnown RBP12.33□□□□□ -0.44
AC055717.1-201ENST00000502221 GLE1Q53GS7 698 aaKnown RBP12.33□□□□□ -0.44
AC055717.1-201ENST00000502221 CCDC170Q8IYT3 715 aa12.33□□□□□ -0.44
AC055717.1-201ENST00000502221 OR8K1Q8NGG5 319 aa12.33□□□□□ -0.44
AC055717.1-201ENST00000502221 KAT2BQ92831 832 aa12.33□□□□□ -0.44
AC055717.1-201ENST00000502221 NEUROD6Q96NK8 337 aa12.33□□□□□ -0.44
AC055717.1-201ENST00000502221 NUP88Q99567 741 aaPredicted RBP12.33□□□□□ -0.44
AC055717.1-201ENST00000502221 A0A1W2PQC6 194 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 AGPSO00116 658 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 SH2B2O14492 632 aaPredicted RBP12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 N4BP3O15049 544 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 ZBTB43O43298 467 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 HSF2BPO75031 334 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 FMNL1O95466 1100 aaPredicted RBP12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 GPTP24298 496 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 LIFRP42702 1097 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 SMTNP53814 917 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 ANTXR2P58335 489 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 SH3RF1Q7Z6J0 888 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 ANKRD18AQ8IVF6 992 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 STK11IPQ8N1F8 1099 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 RETREG2Q8NC44 543 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 ACRBPQ8NEB7 543 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 CPLX3Q8WVH0 158 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 FERMT2Q96AC1 680 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 NUP58Q9BVL2 599 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 ACTR5Q9H9F9 607 aaPredicted RBP12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 RMND1Q9NWS8 449 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 RWDD2AQ9UIY3 292 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 LAMB4A4D0S4 1761 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 GOLGA6L7A0A1B0GV03 622 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 M0R2C6 588 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 NDUFAB1O14561 156 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 KIF3CO14782 793 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 MMP1P03956 469 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 SERPINB2P05120 415 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 ERVK-24P63145 666 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 SATB1Q01826 763 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 NCAPH2Q6IBW4 605 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 BICDL1Q6ZP65 573 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 TTLL7Q6ZT98 887 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 TRMT44Q8IYL2 757 aaKnown RBP12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 CCDC155Q8N6L0 562 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 CAGE1Q8TC20 777 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 CAVIN3Q969G5 261 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 PIM2Q9P1W9 311 aa12.32□□□□□ -0.44
AC055717.1-201ENST00000502221 IFNAR1P17181 557 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 KRT9P35527 623 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 TDO2P48775 406 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 FNTAP49354 379 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 FXR1P51114 621 aaKnown RBP eCLIP12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 CDR1P51861 262 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 PPP2R5BQ15173 497 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 TBC1D9BQ66K14 1250 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 KCNV1Q6PIU1 500 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 APOA5Q6Q788 366 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 CCDC24Q8N4L8 307 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 XAGE3Q8WTP9 111 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 P3H4Q92791 437 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 OSBP2Q969R2 916 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 JAKMIP2Q96AA8 810 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 MED15Q96RN5 788 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 CAPN7Q9Y6W3 813 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 GRIN2DO15399 1336 aa12.31□□□□□ -0.44
AC055717.1-201ENST00000502221 H7C1D1 291 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 NF2P35240 595 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 IFFO1Q0D2I5 559 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 NTRK3Q16288 839 aa12.3□□□□□ -0.44
AC055717.1-201ENST00000502221 PREPLQ4J6C6 727 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms