RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 TFRCP02786 760 aaKnown RBP18.53■□□□□ 0.56
COL6A1-206ENST00000498614 CALM1P0DP23 149 aa18.53■□□□□ 0.56
COL6A1-206ENST00000498614 CALM2P0DP24 149 aa18.53■□□□□ 0.56
COL6A1-206ENST00000498614 CALM3P0DP25 149 aa18.53■□□□□ 0.56
COL6A1-206ENST00000498614 CASP1P29466 404 aa18.53■□□□□ 0.56
COL6A1-206ENST00000498614 AFMP43652 599 aa18.53■□□□□ 0.56
COL6A1-206ENST00000498614 ZNF174Q15697 407 aa18.53■□□□□ 0.56
COL6A1-206ENST00000498614 ZNF569Q5MCW4 686 aa18.53■□□□□ 0.56
COL6A1-206ENST00000498614 CRNKL1Q9BZJ0 848 aaKnown RBP18.53■□□□□ 0.56
COL6A1-206ENST00000498614 PDE11AQ9HCR9 933 aa18.53■□□□□ 0.56
COL6A1-206ENST00000498614 BAZ2BQ9UIF8 2168 aaKnown RBP18.53■□□□□ 0.56
COL6A1-206ENST00000498614 CNTNAP5Q8WYK1 1306 aa18.52■□□□□ 0.56
COL6A1-206ENST00000498614 SEMA3EO15041 775 aa18.52■□□□□ 0.56
COL6A1-206ENST00000498614 DDAH1O94760 285 aa18.52■□□□□ 0.56
COL6A1-206ENST00000498614 PBX1P40424 430 aa18.52■□□□□ 0.56
COL6A1-206ENST00000498614 MCM6Q14566 821 aa18.52■□□□□ 0.56
COL6A1-206ENST00000498614 SPATA1Q5VX52 437 aa18.52■□□□□ 0.56
COL6A1-206ENST00000498614 KANK3Q6NY19 840 aa18.52■□□□□ 0.56
COL6A1-206ENST00000498614 TXNRD3Q86VQ6 643 aa18.52■□□□□ 0.56
COL6A1-206ENST00000498614 SRBD1Q8N5C6 995 aaKnown RBP18.52■□□□□ 0.56
COL6A1-206ENST00000498614 NYXQ9GZU5 481 aa18.52■□□□□ 0.56
COL6A1-206ENST00000498614 PCP11498 1178 aaKnown RBP18.52■□□□□ 0.55
COL6A1-206ENST00000498614 NPY5RQ15761 445 aa18.52■□□□□ 0.55
COL6A1-206ENST00000498614 PRR5LQ6MZQ0 368 aa18.52■□□□□ 0.55
COL6A1-206ENST00000498614 CEP112Q8N8E3 955 aa18.52■□□□□ 0.55
COL6A1-206ENST00000498614 CNBD1Q8NA66 436 aa18.52■□□□□ 0.55
COL6A1-206ENST00000498614 CTCFLQ8NI51 663 aaPredicted RBP18.52■□□□□ 0.55
COL6A1-206ENST00000498614 HNRNPLLQ8WVV9 542 aaKnown RBP18.52■□□□□ 0.55
COL6A1-206ENST00000498614 SYMPKQ92797 1274 aaKnown RBP18.52■□□□□ 0.55
COL6A1-206ENST00000498614 PSD3Q9NYI0 1048 aa18.52■□□□□ 0.55
COL6A1-206ENST00000498614 ADD3Q9UEY8 706 aaKnown RBP18.52■□□□□ 0.55
COL6A1-206ENST00000498614 MFAP3LO75121 409 aa18.51■□□□□ 0.55
COL6A1-206ENST00000498614 CUL4BQ13620 913 aa18.51■□□□□ 0.55
COL6A1-206ENST00000498614 UPF1Q92900 1129 aaKnown RBP eCLIP18.51■□□□□ 0.55
COL6A1-206ENST00000498614 NAA15Q9BXJ9 866 aaKnown RBP18.51■□□□□ 0.55
COL6A1-206ENST00000498614 SUGCTQ9HAC7 445 aa18.51■□□□□ 0.55
COL6A1-206ENST00000498614 BRMS1Q9HCU9 246 aa18.51■□□□□ 0.55
COL6A1-206ENST00000498614 RAB21Q9UL25 225 aa18.51■□□□□ 0.55
COL6A1-206ENST00000498614 SYNRGQ9UMZ2 1314 aa18.51■□□□□ 0.55
COL6A1-206ENST00000498614 LAMB1P07942 1786 aa18.51■□□□□ 0.55
COL6A1-206ENST00000498614 POLRMTO00411 1230 aaKnown RBP18.5■□□□□ 0.55
COL6A1-206ENST00000498614 USP5P45974 858 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 KIF4BQ2VIQ3 1234 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 RASGRP2Q7LDG7 609 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 MSANTD4Q8NCY6 345 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 RGL2O15211 777 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 ORC4O43929 436 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 ABL1P00519 1130 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 MMP10P09238 476 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 CASP14P31944 242 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 TTC38Q5R3I4 469 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 CDKAL1Q5VV42 579 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 SLC51AQ86UW1 340 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 SMYD4Q8IYR2 804 aaPredicted RBP18.5■□□□□ 0.55
COL6A1-206ENST00000498614 SLC35F6Q8N357 371 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 TNFRSF25Q93038 417 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 VPS18Q9P253 973 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 LCMT1Q9UIC8 334 aa18.5■□□□□ 0.55
COL6A1-206ENST00000498614 N4BP1O75113 896 aaKnown RBP18.49■□□□□ 0.55
COL6A1-206ENST00000498614 VEGFAP15692 232 aaPredicted RBP18.49■□□□□ 0.55
COL6A1-206ENST00000498614 HDXQ7Z353 690 aa18.49■□□□□ 0.55
COL6A1-206ENST00000498614 ACRBPQ8NEB7 543 aa18.49■□□□□ 0.55
COL6A1-206ENST00000498614 FLAD1Q8NFF5 587 aa18.49■□□□□ 0.55
COL6A1-206ENST00000498614 GOLGA5Q8TBA6 731 aa18.49■□□□□ 0.55
COL6A1-206ENST00000498614 ANKRD2Q9GZV1 360 aa18.49■□□□□ 0.55
COL6A1-206ENST00000498614 TSPYL1Q9H0U9 437 aa18.49■□□□□ 0.55
COL6A1-206ENST00000498614 ABCB6Q9NP58 842 aa18.49■□□□□ 0.55
COL6A1-206ENST00000498614 RGPD3A6NKT7 1758 aaPredicted RBP18.49■□□□□ 0.55
COL6A1-206ENST00000498614 RGPD4Q7Z3J3 1758 aa18.49■□□□□ 0.55
COL6A1-206ENST00000498614 TSPY2A6NKD2 308 aa18.49■□□□□ 0.55
COL6A1-206ENST00000498614 HMGB2P26583 209 aaKnown RBP18.49■□□□□ 0.55
COL6A1-206ENST00000498614 FXR1P51114 621 aaKnown RBP eCLIP18.49■□□□□ 0.55
COL6A1-206ENST00000498614 WWC2Q6AWC2 1192 aa18.49■□□□□ 0.55
COL6A1-206ENST00000498614 NLGN1Q8N2Q7 840 aa18.49■□□□□ 0.55
COL6A1-206ENST00000498614 ATP8A2Q9NTI2 1148 aa18.49■□□□□ 0.55
COL6A1-206ENST00000498614 CTAGE9A4FU28 777 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 ADAMTS3O15072 1205 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 COBLO75128 1261 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 GYPCP04921 128 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 USP17L8P0C7I0 530 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 RHOXF2BP0C7M4 288 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 MAPK8IP2Q13387 824 aaPredicted RBP18.48■□□□□ 0.55
COL6A1-206ENST00000498614 PAGE5Q96GU1 130 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 RHOXF2Q9BQY4 288 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 ARPP21Q9UBL0 812 aaPredicted RBP18.48■□□□□ 0.55
COL6A1-206ENST00000498614 L1RE1Q9UN81 338 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 KIAA1551Q9HCM1 1747 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 POTEB2H3BUK9 544 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 NLRP5P59047 1200 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 PTGDRQ13258 359 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 PIK3AP1Q6ZUJ8 805 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 STAMQ92783 540 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 FERMT2Q96AC1 680 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 TRIM34Q9BYJ4 488 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 MCM9Q9NXL9 1143 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 CCDC88AQ3V6T2 1871 aa18.48■□□□□ 0.55
COL6A1-206ENST00000498614 PDS5AQ29RF7 1337 aaKnown RBP18.47■□□□□ 0.55
COL6A1-206ENST00000498614 SCG2P13521 617 aa18.47■□□□□ 0.55
COL6A1-206ENST00000498614 DZIP1Q86YF9 867 aaKnown RBP18.47■□□□□ 0.55
COL6A1-206ENST00000498614 CCDC125Q86Z20 511 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms