RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 PLA2G6O60733 806 aa15.05■□□□□ -0
HSPG2-213ENST00000498495 HMGCRP04035 888 aa15.05■□□□□ -0
HSPG2-213ENST00000498495 CCL5P13501 91 aa15.05■□□□□ -0
HSPG2-213ENST00000498495 CCDC96Q2M329 555 aa15.05■□□□□ -0
HSPG2-213ENST00000498495 REPS2Q8NFH8 660 aa15.05■□□□□ -0
HSPG2-213ENST00000498495 DCAF4Q8WV16 495 aa15.05■□□□□ -0
HSPG2-213ENST00000498495 ZNF214Q9UL59 606 aaPredicted RBP15.05■□□□□ -0
HSPG2-213ENST00000498495 RBM8AQ9Y5S9 174 aaKnown RBP15.05■□□□□ -0
HSPG2-213ENST00000498495 RLFQ13129 1914 aa15.05■□□□□ -0
HSPG2-213ENST00000498495 CDC45O75419 566 aa15.04■□□□□ -0
HSPG2-213ENST00000498495 FCER1AP12319 257 aa15.04■□□□□ -0
HSPG2-213ENST00000498495 ZKSCAN1P17029 563 aaPredicted RBP15.04■□□□□ -0
HSPG2-213ENST00000498495 EN2P19622 333 aaPredicted RBP15.04■□□□□ -0
HSPG2-213ENST00000498495 COPB2P35606 906 aa15.04■□□□□ -0
HSPG2-213ENST00000498495 GRB14Q14449 540 aa15.04■□□□□ -0
HSPG2-213ENST00000498495 SNRNP48Q6IEG0 339 aaKnown RBP15.04■□□□□ -0
HSPG2-213ENST00000498495 ANKS1AQ92625 1134 aa15.04■□□□□ -0
HSPG2-213ENST00000498495 APBA2Q99767 749 aa15.04■□□□□ -0
HSPG2-213ENST00000498495 UBAC1Q9BSL1 405 aa15.04■□□□□ -0
HSPG2-213ENST00000498495 TEX13BQ9BXU2 312 aa15.04■□□□□ -0
HSPG2-213ENST00000498495 LSG1Q9H089 658 aaKnown RBP15.04■□□□□ -0
HSPG2-213ENST00000498495 UNC93B1Q9H1C4 597 aa15.04■□□□□ -0
HSPG2-213ENST00000498495 KAT14Q9H8E8 782 aa15.04■□□□□ -0
HSPG2-213ENST00000498495 SLC38A10Q9HBR0 1119 aa15.04■□□□□ -0
HSPG2-213ENST00000498495 RAVER2Q9HCJ3 691 aaKnown RBP15.04■□□□□ -0
HSPG2-213ENST00000498495 ANO2Q9NQ90 1003 aa15.04■□□□□ -0
HSPG2-213ENST00000498495 SLC5A4Q9NY91 659 aa15.04■□□□□ -0
HSPG2-213ENST00000498495 E7EWF7 191 aa15.03■□□□□ -0
HSPG2-213ENST00000498495 ATP2A1O14983 1001 aa15.03■□□□□ -0
HSPG2-213ENST00000498495 ADORA2AP29274 412 aa15.03■□□□□ -0
HSPG2-213ENST00000498495 RALYLQ86SE5 291 aaKnown RBP15.03■□□□□ -0
HSPG2-213ENST00000498495 ABRAQ8N0Z2 381 aa15.03■□□□□ -0
HSPG2-213ENST00000498495 NCOA7Q8NI08 942 aa15.03■□□□□ -0
HSPG2-213ENST00000498495 TRIB2Q92519 343 aa15.03■□□□□ -0
HSPG2-213ENST00000498495 MMP19Q99542 508 aa15.03■□□□□ -0
HSPG2-213ENST00000498495 HMX1Q9NP08 348 aaPredicted RBP15.03■□□□□ -0
HSPG2-213ENST00000498495 GPCPD1Q9NPB8 672 aa15.03■□□□□ -0
HSPG2-213ENST00000498495 TNKSO95271 1327 aa15.02■□□□□ -0
HSPG2-213ENST00000498495 FRMPD2Q68DX3 1309 aaPredicted RBP15.02■□□□□ -0
HSPG2-213ENST00000498495 RPTORQ8N122 1335 aa15.02■□□□□ -0
HSPG2-213ENST00000498495 GJB1P08034 283 aa15.02■□□□□ -0
HSPG2-213ENST00000498495 HOXC6P09630 235 aa15.02■□□□□ -0
HSPG2-213ENST00000498495 PDHBP11177 359 aa15.02■□□□□ -0
HSPG2-213ENST00000498495 OAZ1P54368 228 aa15.02■□□□□ -0
HSPG2-213ENST00000498495 TRIM32Q13049 653 aa15.02■□□□□ -0
HSPG2-213ENST00000498495 KCTD2Q14681 263 aa15.02■□□□□ -0
HSPG2-213ENST00000498495 CCL14Q16627 93 aa15.02■□□□□ -0
HSPG2-213ENST00000498495 TTBK2Q6IQ55 1244 aa15.02■□□□□ -0
HSPG2-213ENST00000498495 NPLOC4Q8TAT6 608 aa15.02■□□□□ -0
HSPG2-213ENST00000498495 PRR12Q9ULL5 1215 aa15.02■□□□□ -0
HSPG2-213ENST00000498495 RIPK3Q9Y572 518 aa15.02■□□□□ -0
HSPG2-213ENST00000498495 ERICH2A1L162 156 aa15.01□□□□□ -0.01
HSPG2-213ENST00000498495 COBLO75128 1261 aa15.01□□□□□ -0.01
HSPG2-213ENST00000498495 SLC16A2P36021 539 aa15.01□□□□□ -0.01
HSPG2-213ENST00000498495 IFIT1BQ5T764 474 aaKnown RBP15.01□□□□□ -0.01
HSPG2-213ENST00000498495 MFSD14CQ5VZR4 134 aa15.01□□□□□ -0.01
HSPG2-213ENST00000498495 BTNL9Q6UXG8 535 aa15.01□□□□□ -0.01
HSPG2-213ENST00000498495 CYB5R4Q7L1T6 521 aa15.01□□□□□ -0.01
HSPG2-213ENST00000498495 RASGRP2Q7LDG7 609 aa15.01□□□□□ -0.01
HSPG2-213ENST00000498495 ENAHQ8N8S7 591 aaPredicted RBP15.01□□□□□ -0.01
HSPG2-213ENST00000498495 PNMA1Q8ND90 353 aa15.01□□□□□ -0.01
HSPG2-213ENST00000498495 PARP14Q460N5 1801 aa15.01□□□□□ -0.01
HSPG2-213ENST00000498495 IFIT3O14879 490 aaKnown RBP15□□□□□ -0.01
HSPG2-213ENST00000498495 SLC27A2O14975 620 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 SGPL1O95470 568 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 SNHG28P0DPA3 235 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 PRKAR2AP13861 404 aaKnown RBP15□□□□□ -0.01
HSPG2-213ENST00000498495 GJA8P48165 433 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 SNAP25P60880 206 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 CACNB2Q08289 660 aaPredicted RBP15□□□□□ -0.01
HSPG2-213ENST00000498495 ZNF543Q08ER8 600 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 NECTIN1Q15223 517 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 GPATCH4Q5T3I0 446 aaKnown RBP15□□□□□ -0.01
HSPG2-213ENST00000498495 SYDE2Q5VT97 1194 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 CCDC174Q6PII3 467 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 CHST13Q8NET6 341 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 U2AF1L4Q8WU68 220 aaKnown RBP15□□□□□ -0.01
HSPG2-213ENST00000498495 DDX11Q96FC9 970 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 DEFB118Q96PH6 123 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 FLRT1Q9NZU1 646 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 FBXO40Q9UH90 709 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 TAF6LQ9Y6J9 622 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 PLXNB2O15031 1838 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 LAMA4Q16363 1823 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 A0A0G2JMZ2 1700 aa15□□□□□ -0.01
HSPG2-213ENST00000498495 COL11A1P12107 1806 aaPredicted RBP14.99□□□□□ -0.01
HSPG2-213ENST00000498495 TFRCP02786 760 aaKnown RBP14.99□□□□□ -0.01
HSPG2-213ENST00000498495 GOLGA8HP0CJ92 632 aa14.99□□□□□ -0.01
HSPG2-213ENST00000498495 SART3Q15020 963 aaKnown RBP14.99□□□□□ -0.01
HSPG2-213ENST00000498495 RNF20Q5VTR2 975 aa14.99□□□□□ -0.01
HSPG2-213ENST00000498495 CREB3L3Q68CJ9 461 aa14.99□□□□□ -0.01
HSPG2-213ENST00000498495 STOX1Q6ZVD7 989 aa14.99□□□□□ -0.01
HSPG2-213ENST00000498495 CHST3Q7LGC8 479 aa14.99□□□□□ -0.01
HSPG2-213ENST00000498495 ANKRD35Q8N283 1001 aa14.99□□□□□ -0.01
HSPG2-213ENST00000498495 AGBL1Q96MI9 1066 aa14.99□□□□□ -0.01
HSPG2-213ENST00000498495 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.99□□□□□ -0.01
HSPG2-213ENST00000498495 PAK6Q9NQU5 681 aaPredicted RBP14.99□□□□□ -0.01
HSPG2-213ENST00000498495 ZNF536O15090 1300 aa14.98□□□□□ -0.01
HSPG2-213ENST00000498495 PGK2P07205 417 aa14.98□□□□□ -0.01
HSPG2-213ENST00000498495 PARP1P09874 1014 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms