RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 MAMDC4Q6UXC1 1216 aa15.31■□□□□ 0.04
TRIM27-207ENST00000498117 EAF2Q96CJ1 260 aaPredicted RBP15.31■□□□□ 0.04
TRIM27-207ENST00000498117 CCDC17Q96LX7 622 aa15.31■□□□□ 0.04
TRIM27-207ENST00000498117 NECAB3Q96P71 396 aaPredicted RBP15.31■□□□□ 0.04
TRIM27-207ENST00000498117 PPP1R12CQ9BZL4 782 aa15.31■□□□□ 0.04
TRIM27-207ENST00000498117 IL23AQ9NPF7 189 aa15.31■□□□□ 0.04
TRIM27-207ENST00000498117 TLR7Q9NYK1 1049 aaKnown RBP15.31■□□□□ 0.04
TRIM27-207ENST00000498117 ZHX1Q9UKY1 873 aaPredicted RBP15.31■□□□□ 0.04
TRIM27-207ENST00000498117 SNAI1O95863 264 aaPredicted RBP15.3■□□□□ 0.04
TRIM27-207ENST00000498117 EVX2Q03828 476 aa15.3■□□□□ 0.04
TRIM27-207ENST00000498117 FAM126BQ8IXS8 530 aa15.3■□□□□ 0.04
TRIM27-207ENST00000498117 DDX11Q96FC9 970 aa15.3■□□□□ 0.04
TRIM27-207ENST00000498117 DCP1AQ9NPI6 582 aaPredicted RBP15.3■□□□□ 0.04
TRIM27-207ENST00000498117 FBXO28Q9NVF7 368 aa15.3■□□□□ 0.04
TRIM27-207ENST00000498117 ZNF214Q9UL59 606 aaPredicted RBP15.3■□□□□ 0.04
TRIM27-207ENST00000498117 PPP1R9AQ9ULJ8 1098 aa15.3■□□□□ 0.04
TRIM27-207ENST00000498117 NOP58Q9Y2X3 529 aaKnown RBP15.3■□□□□ 0.04
TRIM27-207ENST00000498117 HCN4Q9Y3Q4 1203 aa15.3■□□□□ 0.04
TRIM27-207ENST00000498117 CHD9Q3L8U1 2897 aa15.29■□□□□ 0.04
TRIM27-207ENST00000498117 MYADML2A6NDP7 307 aa15.29■□□□□ 0.04
TRIM27-207ENST00000498117 BCAR3O75815 825 aa15.29■□□□□ 0.04
TRIM27-207ENST00000498117 AKR1B1P15121 316 aa15.29■□□□□ 0.04
TRIM27-207ENST00000498117 TTF1Q15361 905 aaPredicted RBP15.29■□□□□ 0.04
TRIM27-207ENST00000498117 GNASQ5JWF2 1037 aa15.29■□□□□ 0.04
TRIM27-207ENST00000498117 CLEC10AQ8IUN9 316 aa15.29■□□□□ 0.04
TRIM27-207ENST00000498117 YBX2Q9Y2T7 364 aaKnown RBP15.29■□□□□ 0.04
TRIM27-207ENST00000498117 CYP2D6P10635 497 aa15.28■□□□□ 0.04
TRIM27-207ENST00000498117 CYP2C18P33260 490 aa15.28■□□□□ 0.04
TRIM27-207ENST00000498117 GJA9P57773 515 aa15.28■□□□□ 0.04
TRIM27-207ENST00000498117 ACVR2BQ13705 512 aa15.28■□□□□ 0.04
TRIM27-207ENST00000498117 SKIV2LQ15477 1246 aaKnown RBP15.28■□□□□ 0.04
TRIM27-207ENST00000498117 SLC9C2Q5TAH2 1124 aa15.28■□□□□ 0.04
TRIM27-207ENST00000498117 MICALL1Q8N3F8 863 aa15.28■□□□□ 0.04
TRIM27-207ENST00000498117 REPS2Q8NFH8 660 aa15.28■□□□□ 0.04
TRIM27-207ENST00000498117 SDR42E1Q8WUS8 393 aa15.28■□□□□ 0.04
TRIM27-207ENST00000498117 CLUAP1Q96AJ1 413 aa15.28■□□□□ 0.04
TRIM27-207ENST00000498117 DYNLL2Q96FJ2 89 aa15.28■□□□□ 0.04
TRIM27-207ENST00000498117 LRFN3Q9BTN0 628 aa15.28■□□□□ 0.04
TRIM27-207ENST00000498117 ABHD16BQ9H3Z7 469 aa15.28■□□□□ 0.04
TRIM27-207ENST00000498117 KANSL2Q9H9L4 492 aa15.28■□□□□ 0.04
TRIM27-207ENST00000498117 GOPCQ9HD26 462 aa15.28■□□□□ 0.04
TRIM27-207ENST00000498117 TCF20Q9UGU0 1960 aaKnown RBP15.27■□□□□ 0.04
TRIM27-207ENST00000498117 ERC2O15083 957 aa15.27■□□□□ 0.04
TRIM27-207ENST00000498117 CD4P01730 458 aa15.27■□□□□ 0.04
TRIM27-207ENST00000498117 EEF2P13639 858 aaKnown RBP15.27■□□□□ 0.04
TRIM27-207ENST00000498117 PDE6AP16499 860 aa15.27■□□□□ 0.04
TRIM27-207ENST00000498117 TFF2Q03403 129 aa15.27■□□□□ 0.04
TRIM27-207ENST00000498117 PPP2R2DQ66LE6 453 aa15.27■□□□□ 0.04
TRIM27-207ENST00000498117 OTOP2Q7RTS6 562 aa15.27■□□□□ 0.04
TRIM27-207ENST00000498117 ZNF467Q7Z7K2 595 aaPredicted RBP15.27■□□□□ 0.04
TRIM27-207ENST00000498117 FRAT1Q92837 279 aaPredicted RBP15.27■□□□□ 0.04
TRIM27-207ENST00000498117 TEX13BQ9BXU2 312 aa15.27■□□□□ 0.04
TRIM27-207ENST00000498117 UPF3AQ9H1J1 476 aaKnown RBP15.27■□□□□ 0.04
TRIM27-207ENST00000498117 ZNF532Q9HCE3 1301 aa15.26■□□□□ 0.03
TRIM27-207ENST00000498117 DNAJC25-GNG10A0A024R161 153 aa15.26■□□□□ 0.03
TRIM27-207ENST00000498117 RAD21O60216 631 aa15.26■□□□□ 0.03
TRIM27-207ENST00000498117 CDK8P49336 464 aa15.26■□□□□ 0.03
TRIM27-207ENST00000498117 IRX5P78411 483 aaPredicted RBP15.26■□□□□ 0.03
TRIM27-207ENST00000498117 CCDC144BQ3MJ40 725 aa15.26■□□□□ 0.03
TRIM27-207ENST00000498117 SNRNP48Q6IEG0 339 aaKnown RBP15.26■□□□□ 0.03
TRIM27-207ENST00000498117 RPUSD2Q8IZ73 545 aaKnown RBP15.26■□□□□ 0.03
TRIM27-207ENST00000498117 HIPK3Q9H422 1215 aa15.26■□□□□ 0.03
TRIM27-207ENST00000498117 EPHX3Q9H6B9 360 aa15.26■□□□□ 0.03
TRIM27-207ENST00000498117 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.26■□□□□ 0.03
TRIM27-207ENST00000498117 TNNQ9UQP3 1299 aa15.26■□□□□ 0.03
TRIM27-207ENST00000498117 PCDHA11Q9Y5I1 949 aa15.26■□□□□ 0.03
TRIM27-207ENST00000498117 SLC4A7Q9Y6M7 1214 aa15.26■□□□□ 0.03
TRIM27-207ENST00000498117 GTPBP6O43824 516 aaPredicted RBP15.25■□□□□ 0.03
TRIM27-207ENST00000498117 KCNQ1P51787 676 aa15.25■□□□□ 0.03
TRIM27-207ENST00000498117 RABGGTBP53611 331 aa15.25■□□□□ 0.03
TRIM27-207ENST00000498117 TMEM31Q5JXX7 168 aa15.25■□□□□ 0.03
TRIM27-207ENST00000498117 FAM83BQ5T0W9 1011 aa15.25■□□□□ 0.03
TRIM27-207ENST00000498117 AMOTL1Q8IY63 956 aa15.25■□□□□ 0.03
TRIM27-207ENST00000498117 LCORLQ8N3X6 602 aa15.25■□□□□ 0.03
TRIM27-207ENST00000498117 SEZ6LQ9BYH1 1024 aa15.25■□□□□ 0.03
TRIM27-207ENST00000498117 ATP8A2Q9NTI2 1148 aa15.25■□□□□ 0.03
TRIM27-207ENST00000498117 ADCY6O43306 1168 aa15.24■□□□□ 0.03
TRIM27-207ENST00000498117 CABYRO75952 493 aa15.24■□□□□ 0.03
TRIM27-207ENST00000498117 POU3F3P20264 500 aaPredicted RBP15.24■□□□□ 0.03
TRIM27-207ENST00000498117 NKX3-2P78367 333 aa15.24■□□□□ 0.03
TRIM27-207ENST00000498117 AACSQ86V21 672 aa15.24■□□□□ 0.03
TRIM27-207ENST00000498117 TMEM57Q8N5G2 664 aa15.24■□□□□ 0.03
TRIM27-207ENST00000498117 SLC43A3Q8NBI5 491 aa15.24■□□□□ 0.03
TRIM27-207ENST00000498117 SLF1Q9BQI6 1058 aa15.24■□□□□ 0.03
TRIM27-207ENST00000498117 COG5Q9UP83 839 aa15.24■□□□□ 0.03
TRIM27-207ENST00000498117 RIPK3Q9Y572 518 aa15.24■□□□□ 0.03
TRIM27-207ENST00000498117 NAV1Q8NEY1 1877 aa15.24■□□□□ 0.03
TRIM27-207ENST00000498117 COL11A1P12107 1806 aaPredicted RBP15.24■□□□□ 0.03
TRIM27-207ENST00000498117 CHD7Q9P2D1 2997 aa15.24■□□□□ 0.03
TRIM27-207ENST00000498117 PIEZO1Q92508 2521 aa15.23■□□□□ 0.03
TRIM27-207ENST00000498117 PARP14Q460N5 1801 aa15.23■□□□□ 0.03
TRIM27-207ENST00000498117 SLC4A3P48751 1232 aa15.23■□□□□ 0.03
TRIM27-207ENST00000498117 CCL23P55773 120 aa15.23■□□□□ 0.03
TRIM27-207ENST00000498117 C12orf60Q5U649 245 aa15.23■□□□□ 0.03
TRIM27-207ENST00000498117 ERC1Q8IUD2 1116 aa15.23■□□□□ 0.03
TRIM27-207ENST00000498117 PRPF38AQ8NAV1 312 aaKnown RBP15.23■□□□□ 0.03
TRIM27-207ENST00000498117 ARMT1Q9H993 441 aa15.23■□□□□ 0.03
TRIM27-207ENST00000498117 CTDP1Q9Y5B0 961 aaPredicted RBP15.23■□□□□ 0.03
TRIM27-207ENST00000498117 TCRBV5S4A2TA0A5A2 114 aa15.22■□□□□ 0.03
TRIM27-207ENST00000498117 ZBBXA8MT70 800 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms