RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 PTF1AQ7RTS3 328 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 ANKRD35Q8N283 1001 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 XPO4Q9C0E2 1151 aaKnown RBP9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 SENP2Q9HC62 589 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 SRPRBQ9Y5M8 271 aaKnown RBP9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 PDE4DIPQ5VU43 2346 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 STAT6P42226 847 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 GMPSP49915 693 aaPredicted RBP9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 CCNA1P78396 465 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 PLA2G4DQ86XP0 818 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 DGKHQ86XP1 1220 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 MYRIPQ8NFW9 859 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 TDRD3Q9H7E2 651 aaKnown RBP9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 ZBTB21Q9ULJ3 1066 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 PYCARDQ9ULZ3 195 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 XIRP1Q702N8 1843 aaKnown RBP9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 ATRNO75882 1429 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 COL14A1Q05707 1796 aaKnown RBP9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 GOLGA6L9A6NEM1 432 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 ZBBXA8MT70 800 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 H0YHG0 523 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 STK25O00506 426 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 FLOT1O75955 427 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 TMEM266Q2M3C6 531 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 ARFGEF2Q9Y6D5 1785 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 NOP56O00567 594 aaKnown RBP9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 PLSCR1O15162 318 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 NEFHP12036 1026 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 AMPD3Q01432 767 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 LRMPQ12912 555 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 DEFB115Q30KQ5 88 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 Q3C1V9 767 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 ANGEL2Q5VTE6 544 aaKnown RBP9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 RRAGBQ5VZM2 374 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 GALNT17Q6IS24 598 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 PRR5LQ6MZQ0 368 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 TMTC3Q6ZXV5 915 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 LRRC8AQ8IWT6 810 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 ZNF579Q8NAF0 562 aaKnown RBP9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 SMC1BQ8NDV3 1235 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 COA7Q96BR5 231 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 LBHD1Q9BQE6 289 aaPredicted RBP9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 BPIFA3Q9BQP9 254 aa9.01□□□□□ -0.97
HLA-DMB-262ENST00000498020 IQCB1Q15051 598 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 AXDND1Q5T1B0 1012 aaPredicted RBP9□□□□□ -0.97
HLA-DMB-262ENST00000498020 RNF169Q8NCN4 708 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 KIFC2Q96AC6 838 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 ZBED2Q9BTP6 218 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 GPCPD1Q9NPB8 672 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 UBE2Q2LH0YL09 131 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 TNPO2O14787 897 aaKnown RBP9□□□□□ -0.97
HLA-DMB-262ENST00000498020 ZBED4O75132 1171 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 KCNA4P22459 653 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 BTDP43251 543 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 SBK1Q52WX2 424 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 CCDC181Q5TID7 509 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 TNS4Q8IZW8 715 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 BLIDQ8IZY5 108 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 SPICE1Q8N0Z3 855 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 CALML4Q96GE6 196 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 NRBP1Q9UHY1 535 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 ZHX1Q9UKY1 873 aaPredicted RBP9□□□□□ -0.97
HLA-DMB-262ENST00000498020 A0A087WWV3 80 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 MYCLP12524 364 aaPredicted RBP9□□□□□ -0.97
HLA-DMB-262ENST00000498020 NTRK3Q16288 839 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 RIOK1Q9BRS2 568 aaKnown RBP9□□□□□ -0.97
HLA-DMB-262ENST00000498020 EHMT1Q9H9B1 1298 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 CWC15Q9P013 229 aaKnown RBP9□□□□□ -0.97
HLA-DMB-262ENST00000498020 NFE2L3Q9Y4A8 694 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 PCDHB6Q9Y5E3 794 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 FOXP2O15409 715 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 KCTD2Q14681 263 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 CACTINQ8WUQ7 758 aaKnown RBP9□□□□□ -0.97
HLA-DMB-262ENST00000498020 ZHX2Q9Y6X8 837 aa9□□□□□ -0.97
HLA-DMB-262ENST00000498020 LAMB4A4D0S4 1761 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 SIPA1L3O60292 1781 aaPredicted RBP8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 PLEKHA8P1O95397 391 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 TGFB2P61812 414 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 HSP90AA4PQ58FG1 418 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 KRT25Q7Z3Z0 450 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 CSRNP2Q9H175 543 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 CD2APQ9Y5K6 639 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 PDS5AQ29RF7 1337 aaKnown RBP8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 GUCY1A2P33402 732 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 SLC1A4P43007 532 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 LONRF3Q496Y0 759 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 SHC4Q6S5L8 630 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 PDCL2Q8N4E4 241 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 GTPBP4Q9BZE4 634 aaKnown RBP8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 GOLGA6L10A6NI86 522 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 N4BP3O15049 544 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 SORBS3O60504 671 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 LPXNO60711 386 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 DESP17661 470 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 ELP3Q9H9T3 547 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 NMRK2Q9NPI5 230 aa8.99□□□□□ -0.97
HLA-DMB-262ENST00000498020 OSBPP22059 807 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 PLCD1P51178 756 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 PTGDRQ13258 359 aa8.98□□□□□ -0.97
HLA-DMB-262ENST00000498020 DIXDC1Q155Q3 683 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms