RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 CYP7A1P22680 504 aa12.73□□□□□ -0.37
TOM1-217ENST00000497448 EVX2Q03828 476 aa12.73□□□□□ -0.37
TOM1-217ENST00000497448 GABPAQ06546 454 aa12.73□□□□□ -0.37
TOM1-217ENST00000497448 RIOX2Q8IUF8 465 aa12.73□□□□□ -0.37
TOM1-217ENST00000497448 SPICE1Q8N0Z3 855 aa12.73□□□□□ -0.37
TOM1-217ENST00000497448 HIPK3Q9H422 1215 aa12.73□□□□□ -0.37
TOM1-217ENST00000497448 CD320Q9NPF0 282 aa12.73□□□□□ -0.37
TOM1-217ENST00000497448 SMC4Q9NTJ3 1288 aa12.73□□□□□ -0.37
TOM1-217ENST00000497448 FAM184BQ9ULE4 1060 aa12.73□□□□□ -0.37
TOM1-217ENST00000497448 PRR33A8MZF0 331 aa12.72□□□□□ -0.37
TOM1-217ENST00000497448 SNAI1O95863 264 aaPredicted RBP12.72□□□□□ -0.37
TOM1-217ENST00000497448 ZAP70P43403 619 aa12.72□□□□□ -0.37
TOM1-217ENST00000497448 ALDH1L2Q3SY69 923 aa12.72□□□□□ -0.37
TOM1-217ENST00000497448 CLEC10AQ8IUN9 316 aa12.72□□□□□ -0.37
TOM1-217ENST00000497448 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
TOM1-217ENST00000497448 PCSK9Q8NBP7 692 aaKnown RBP12.72□□□□□ -0.37
TOM1-217ENST00000497448 VTI1AQ96AJ9 217 aa12.72□□□□□ -0.37
TOM1-217ENST00000497448 UPF3AQ9H1J1 476 aaKnown RBP12.72□□□□□ -0.37
TOM1-217ENST00000497448 WNT8AQ9H1J5 351 aa12.72□□□□□ -0.37
TOM1-217ENST00000497448 CERS4Q9HA82 394 aa12.72□□□□□ -0.37
TOM1-217ENST00000497448 SLC4A7Q9Y6M7 1214 aa12.72□□□□□ -0.37
TOM1-217ENST00000497448 SCN5AQ14524 2016 aa12.71□□□□□ -0.37
TOM1-217ENST00000497448 ZBBXA8MT70 800 aa12.71□□□□□ -0.37
TOM1-217ENST00000497448 IGSF3O75054 1194 aa12.71□□□□□ -0.37
TOM1-217ENST00000497448 CA3P07451 260 aa12.71□□□□□ -0.37
TOM1-217ENST00000497448 CCL23P55773 120 aa12.71□□□□□ -0.37
TOM1-217ENST00000497448 NHLH1Q02575 133 aa12.71□□□□□ -0.37
TOM1-217ENST00000497448 CERS3Q8IU89 383 aa12.71□□□□□ -0.37
TOM1-217ENST00000497448 MSL3Q8N5Y2 521 aaKnown RBP12.71□□□□□ -0.37
TOM1-217ENST00000497448 HLA-CQ95604 372 aa12.71□□□□□ -0.37
TOM1-217ENST00000497448 VWCEQ96DN2 955 aa12.71□□□□□ -0.37
TOM1-217ENST00000497448 DBNDD2Q9BQY9 259 aa12.71□□□□□ -0.37
TOM1-217ENST00000497448 ZNF214Q9UL59 606 aaPredicted RBP12.71□□□□□ -0.37
TOM1-217ENST00000497448 TANC1Q9C0D5 1861 aa12.71□□□□□ -0.37
TOM1-217ENST00000497448 PTPRSQ13332 1948 aa12.7□□□□□ -0.38
TOM1-217ENST00000497448 WDR46O15213 610 aaKnown RBP12.7□□□□□ -0.38
TOM1-217ENST00000497448 ATP2A2P16615 1042 aaKnown RBP12.7□□□□□ -0.38
TOM1-217ENST00000497448 GJA9P57773 515 aa12.7□□□□□ -0.38
TOM1-217ENST00000497448 CCDC158Q5M9N0 1113 aa12.7□□□□□ -0.38
TOM1-217ENST00000497448 MAMDC4Q6UXC1 1216 aa12.7□□□□□ -0.38
TOM1-217ENST00000497448 TMEM179Q6ZVK1 233 aa12.7□□□□□ -0.38
TOM1-217ENST00000497448 REPS2Q8NFH8 660 aa12.7□□□□□ -0.38
TOM1-217ENST00000497448 NOC4LQ9BVI4 516 aaKnown RBP12.7□□□□□ -0.38
TOM1-217ENST00000497448 VCPKMTQ9H867 229 aa12.7□□□□□ -0.38
TOM1-217ENST00000497448 FBXO28Q9NVF7 368 aa12.7□□□□□ -0.38
TOM1-217ENST00000497448 ADAMTS5Q9UNA0 930 aa12.7□□□□□ -0.38
TOM1-217ENST00000497448 BRWD1Q9NSI6 2320 aa12.7□□□□□ -0.38
TOM1-217ENST00000497448 CTAGE5O15320 804 aa12.69□□□□□ -0.38
TOM1-217ENST00000497448 IDH1O75874 414 aaKnown RBP12.69□□□□□ -0.38
TOM1-217ENST00000497448 ARHGEF15O94989 841 aa12.69□□□□□ -0.38
TOM1-217ENST00000497448 POLR3DP05423 398 aaPredicted RBP12.69□□□□□ -0.38
TOM1-217ENST00000497448 STAT3P40763 770 aa12.69□□□□□ -0.38
TOM1-217ENST00000497448 ICA1Q05084 483 aa12.69□□□□□ -0.38
TOM1-217ENST00000497448 TNNI3KQ59H18 835 aa12.69□□□□□ -0.38
TOM1-217ENST00000497448 TMEM67Q5HYA8 995 aa12.69□□□□□ -0.38
TOM1-217ENST00000497448 SIAH1Q8IUQ4 282 aa12.69□□□□□ -0.38
TOM1-217ENST00000497448 MAGEB6Q8N7X4 407 aa12.69□□□□□ -0.38
TOM1-217ENST00000497448 SLC43A3Q8NBI5 491 aa12.69□□□□□ -0.38
TOM1-217ENST00000497448 SPC25Q9HBM1 224 aa12.69□□□□□ -0.38
TOM1-217ENST00000497448 ARHGEF10LQ9HCE6 1279 aa12.69□□□□□ -0.38
TOM1-217ENST00000497448 TMX2Q9Y320 296 aa12.69□□□□□ -0.38
TOM1-217ENST00000497448 FPGT-TNNI3KV9GXZ4 949 aa12.69□□□□□ -0.38
TOM1-217ENST00000497448 PNMA6EA0A0J9YXQ4 647 aa12.68□□□□□ -0.38
TOM1-217ENST00000497448 VWA5AO00534 786 aa12.68□□□□□ -0.38
TOM1-217ENST00000497448 COPB2P35606 906 aa12.68□□□□□ -0.38
TOM1-217ENST00000497448 G3BP1Q13283 466 aaKnown RBP eCLIP12.68□□□□□ -0.38
TOM1-217ENST00000497448 ACVR2BQ13705 512 aa12.68□□□□□ -0.38
TOM1-217ENST00000497448 GNASQ5JWF2 1037 aa12.68□□□□□ -0.38
TOM1-217ENST00000497448 ARNTL2Q8WYA1 636 aa12.68□□□□□ -0.38
TOM1-217ENST00000497448 SCLYQ96I15 445 aa12.68□□□□□ -0.38
TOM1-217ENST00000497448 ZNF512BQ96KM6 892 aaPredicted RBP12.68□□□□□ -0.38
TOM1-217ENST00000497448 RIOK1Q9BRS2 568 aaKnown RBP12.68□□□□□ -0.38
TOM1-217ENST00000497448 API5Q9BZZ5 524 aaKnown RBP12.68□□□□□ -0.38
TOM1-217ENST00000497448 SH2D4AQ9H788 454 aa12.68□□□□□ -0.38
TOM1-217ENST00000497448 GPR108Q9NPR9 543 aa12.68□□□□□ -0.38
TOM1-217ENST00000497448 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.68□□□□□ -0.38
TOM1-217ENST00000497448 NOB1Q9ULX3 412 aaKnown RBP12.68□□□□□ -0.38
TOM1-217ENST00000497448 BAZ2AQ9UIF9 1905 aaKnown RBP12.67□□□□□ -0.38
TOM1-217ENST00000497448 DNAJC25-GNG10A0A024R161 153 aa12.67□□□□□ -0.38
TOM1-217ENST00000497448 B4GALT4O60513 344 aa12.67□□□□□ -0.38
TOM1-217ENST00000497448 GNAI3P08754 354 aa12.67□□□□□ -0.38
TOM1-217ENST00000497448 BEX3Q00994 111 aa12.67□□□□□ -0.38
TOM1-217ENST00000497448 GRB10Q13322 594 aa12.67□□□□□ -0.38
TOM1-217ENST00000497448 TTLL4Q14679 1199 aa12.67□□□□□ -0.38
TOM1-217ENST00000497448 CCDC144BQ3MJ40 725 aa12.67□□□□□ -0.38
TOM1-217ENST00000497448 ZNF467Q7Z7K2 595 aaPredicted RBP12.67□□□□□ -0.38
TOM1-217ENST00000497448 FGD4Q96M96 766 aa12.67□□□□□ -0.38
TOM1-217ENST00000497448 UIMC1Q96RL1 719 aa12.67□□□□□ -0.38
TOM1-217ENST00000497448 PPP1R9AQ9ULJ8 1098 aa12.67□□□□□ -0.38
TOM1-217ENST00000497448 GREB1LQ9C091 1923 aaPredicted RBP12.66□□□□□ -0.38
TOM1-217ENST00000497448 ASTN1O14525 1302 aa12.66□□□□□ -0.38
TOM1-217ENST00000497448 USP34Q70CQ2 3546 aa12.66□□□□□ -0.38
TOM1-217ENST00000497448 E9PSI1 815 aa12.66□□□□□ -0.38
TOM1-217ENST00000497448 LPXNO60711 386 aa12.66□□□□□ -0.38
TOM1-217ENST00000497448 AKR1B1P15121 316 aa12.66□□□□□ -0.38
TOM1-217ENST00000497448 NKX3-2P78367 333 aa12.66□□□□□ -0.38
TOM1-217ENST00000497448 TAP1Q03518 808 aa12.66□□□□□ -0.38
TOM1-217ENST00000497448 CXCL17Q6UXB2 119 aa12.66□□□□□ -0.38
TOM1-217ENST00000497448 SPRED2Q7Z698 418 aa12.66□□□□□ -0.38
TOM1-217ENST00000497448 RPUSD2Q8IZ73 545 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms