RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 SALL3Q9BXA9 1300 aa20.4■□□□□ 0.86
SMC4-226ENST00000497311 FEM1BQ9UK73 627 aa20.4■□□□□ 0.86
SMC4-226ENST00000497311 SMCHD1A6NHR9 2005 aa20.39■□□□□ 0.86
SMC4-226ENST00000497311 PLXNA1Q9UIW2 1896 aa20.39■□□□□ 0.86
SMC4-226ENST00000497311 PLIN4Q96Q06 1357 aa20.39■□□□□ 0.85
SMC4-226ENST00000497311 ATP2A1O14983 1001 aa20.39■□□□□ 0.85
SMC4-226ENST00000497311 RARBP10826 455 aa20.39■□□□□ 0.85
SMC4-226ENST00000497311 SLC4A3P48751 1232 aa20.39■□□□□ 0.85
SMC4-226ENST00000497311 LRRC41Q15345 812 aa20.39■□□□□ 0.85
SMC4-226ENST00000497311 FAM47AQ5JRC9 791 aa20.39■□□□□ 0.85
SMC4-226ENST00000497311 SLC39A5Q6ZMH5 540 aa20.39■□□□□ 0.85
SMC4-226ENST00000497311 CPXCR1Q8N123 301 aa20.39■□□□□ 0.85
SMC4-226ENST00000497311 LRRC47Q8N1G4 583 aaKnown RBP20.39■□□□□ 0.85
SMC4-226ENST00000497311 GMCL1P1Q8NEA9 526 aa20.39■□□□□ 0.85
SMC4-226ENST00000497311 DDX11Q96FC9 970 aa20.39■□□□□ 0.85
SMC4-226ENST00000497311 LBHD1Q9BQE6 289 aaPredicted RBP20.39■□□□□ 0.85
SMC4-226ENST00000497311 PRKAG2Q9UGJ0 569 aa20.39■□□□□ 0.85
SMC4-226ENST00000497311 ATP11BQ9Y2G3 1177 aa20.39■□□□□ 0.85
SMC4-226ENST00000497311 TFAP4Q01664 338 aa20.38■□□□□ 0.85
SMC4-226ENST00000497311 SLFN13Q68D06 897 aa20.38■□□□□ 0.85
SMC4-226ENST00000497311 SLC38A10Q9HBR0 1119 aa20.38■□□□□ 0.85
SMC4-226ENST00000497311 RIPK3Q9Y572 518 aa20.38■□□□□ 0.85
SMC4-226ENST00000497311 BMP3P12645 472 aa20.37■□□□□ 0.85
SMC4-226ENST00000497311 ADCYAP1R1P41586 468 aa20.37■□□□□ 0.85
SMC4-226ENST00000497311 GPR153Q6NV75 609 aa20.37■□□□□ 0.85
SMC4-226ENST00000497311 CCDC129Q6ZRS4 1044 aa20.37■□□□□ 0.85
SMC4-226ENST00000497311 MSL3Q8N5Y2 521 aaKnown RBP20.37■□□□□ 0.85
SMC4-226ENST00000497311 EVI5LQ96CN4 794 aa20.37■□□□□ 0.85
SMC4-226ENST00000497311 RAVER2Q9HCJ3 691 aaKnown RBP20.37■□□□□ 0.85
SMC4-226ENST00000497311 XPNPEP3Q9NQH7 507 aa20.37■□□□□ 0.85
SMC4-226ENST00000497311 CNPY2Q9Y2B0 182 aa20.37■□□□□ 0.85
SMC4-226ENST00000497311 TAL1P17542 331 aaPredicted RBP20.36■□□□□ 0.85
SMC4-226ENST00000497311 HDAC1Q13547 482 aaPredicted RBP20.36■□□□□ 0.85
SMC4-226ENST00000497311 PPP4R3BQ5MIZ7 849 aa20.36■□□□□ 0.85
SMC4-226ENST00000497311 RNF180Q86T96 592 aa20.36■□□□□ 0.85
SMC4-226ENST00000497311 FERMT2Q96AC1 680 aa20.36■□□□□ 0.85
SMC4-226ENST00000497311 ISY1Q9ULR0 285 aaKnown RBP20.36■□□□□ 0.85
SMC4-226ENST00000497311 TSPY2A6NKD2 308 aa20.35■□□□□ 0.85
SMC4-226ENST00000497311 ZNF865P0CJ78 1059 aaPredicted RBP20.35■□□□□ 0.85
SMC4-226ENST00000497311 FDX1P10109 184 aa20.35■□□□□ 0.85
SMC4-226ENST00000497311 AKR1A1P14550 325 aa20.35■□□□□ 0.85
SMC4-226ENST00000497311 OAZ1P54368 228 aa20.35■□□□□ 0.85
SMC4-226ENST00000497311 PDE1AP54750 535 aa20.35■□□□□ 0.85
SMC4-226ENST00000497311 CTDSPL2Q05D32 466 aa20.35■□□□□ 0.85
SMC4-226ENST00000497311 SNX17Q15036 470 aa20.35■□□□□ 0.85
SMC4-226ENST00000497311 FBXO40Q9UH90 709 aa20.35■□□□□ 0.85
SMC4-226ENST00000497311 SYNGAP1Q96PV0 1343 aa20.34■□□□□ 0.85
SMC4-226ENST00000497311 DNAJC25-GNG10A0A024R161 153 aa20.34■□□□□ 0.85
SMC4-226ENST00000497311 TMEM232C9JQI7 657 aa20.34■□□□□ 0.85
SMC4-226ENST00000497311 FOXP2O15409 715 aa20.34■□□□□ 0.85
SMC4-226ENST00000497311 STAT2P52630 851 aa20.34■□□□□ 0.85
SMC4-226ENST00000497311 C1orf53Q5VUE5 145 aa20.34■□□□□ 0.85
SMC4-226ENST00000497311 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.34■□□□□ 0.85
SMC4-226ENST00000497311 ANKRD35Q8N283 1001 aa20.34■□□□□ 0.85
SMC4-226ENST00000497311 CHST13Q8NET6 341 aa20.34■□□□□ 0.85
SMC4-226ENST00000497311 HELLSQ9NRZ9 838 aa20.34■□□□□ 0.85
SMC4-226ENST00000497311 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.34■□□□□ 0.85
SMC4-226ENST00000497311 PGK1P00558 417 aa20.33■□□□□ 0.85
SMC4-226ENST00000497311 SLC1A4P43007 532 aa20.33■□□□□ 0.85
SMC4-226ENST00000497311 IKQ13123 557 aaPredicted RBP20.33■□□□□ 0.85
SMC4-226ENST00000497311 TRIM60Q495X7 471 aa20.33■□□□□ 0.85
SMC4-226ENST00000497311 MAMDC4Q6UXC1 1216 aa20.33■□□□□ 0.85
SMC4-226ENST00000497311 ZNF467Q7Z7K2 595 aaPredicted RBP20.33■□□□□ 0.85
SMC4-226ENST00000497311 FAM160B2Q86V87 743 aa20.33■□□□□ 0.85
SMC4-226ENST00000497311 CHURC1Q8WUH1 139 aa20.33■□□□□ 0.85
SMC4-226ENST00000497311 GMCL1Q96IK5 515 aa20.33■□□□□ 0.85
SMC4-226ENST00000497311 PRDM5Q9NQX1 630 aaPredicted RBP20.33■□□□□ 0.85
SMC4-226ENST00000497311 FAM184BQ9ULE4 1060 aa20.33■□□□□ 0.85
SMC4-226ENST00000497311 STX8Q9UNK0 236 aa20.33■□□□□ 0.85
SMC4-226ENST00000497311 PHF24Q9UPV7 400 aa20.33■□□□□ 0.85
SMC4-226ENST00000497311 SNAI1O95863 264 aaPredicted RBP20.32■□□□□ 0.84
SMC4-226ENST00000497311 MCCP23508 829 aa20.32■□□□□ 0.84
SMC4-226ENST00000497311 VPS53Q5VIR6 699 aa20.32■□□□□ 0.84
SMC4-226ENST00000497311 DEFB123Q8N688 67 aa20.32■□□□□ 0.84
SMC4-226ENST00000497311 STAG1Q8WVM7 1258 aa20.32■□□□□ 0.84
SMC4-226ENST00000497311 INCENPQ9NQS7 918 aa20.32■□□□□ 0.84
SMC4-226ENST00000497311 ANAPC4Q9UJX5 808 aa20.32■□□□□ 0.84
SMC4-226ENST00000497311 ZHX1Q9UKY1 873 aaPredicted RBP20.32■□□□□ 0.84
SMC4-226ENST00000497311 AAMPQ13685 434 aa20.31■□□□□ 0.84
SMC4-226ENST00000497311 ALX1Q15699 326 aa20.31■□□□□ 0.84
SMC4-226ENST00000497311 TICAM2Q86XR7 235 aa20.31■□□□□ 0.84
SMC4-226ENST00000497311 LENG1Q96BZ8 264 aaPredicted RBP20.31■□□□□ 0.84
SMC4-226ENST00000497311 CHMP4CQ96CF2 233 aa20.31■□□□□ 0.84
SMC4-226ENST00000497311 IL17RBQ9NRM6 502 aa20.31■□□□□ 0.84
SMC4-226ENST00000497311 HOMER2Q9NSB8 354 aa20.31■□□□□ 0.84
SMC4-226ENST00000497311 RANBP6O60518 1105 aaKnown RBP20.3■□□□□ 0.84
SMC4-226ENST00000497311 ADAMTS4O75173 837 aa20.3■□□□□ 0.84
SMC4-226ENST00000497311 MCMDC2Q4G0Z9 681 aa20.3■□□□□ 0.84
SMC4-226ENST00000497311 RCSD1Q6JBY9 416 aa20.3■□□□□ 0.84
SMC4-226ENST00000497311 ACAD9Q9H845 621 aa20.3■□□□□ 0.84
SMC4-226ENST00000497311 PDLIM7Q9NR12 457 aa20.3■□□□□ 0.84
SMC4-226ENST00000497311 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.3■□□□□ 0.84
SMC4-226ENST00000497311 A0A1W2PQ45 241 aaPredicted RBP20.29■□□□□ 0.84
SMC4-226ENST00000497311 A0A1W2PQY0 241 aa20.29■□□□□ 0.84
SMC4-226ENST00000497311 ORC4O43929 436 aa20.29■□□□□ 0.84
SMC4-226ENST00000497311 NMT2O60551 498 aa20.29■□□□□ 0.84
SMC4-226ENST00000497311 PLA2G6O60733 806 aa20.29■□□□□ 0.84
SMC4-226ENST00000497311 TLE2Q04725 743 aa20.29■□□□□ 0.84
SMC4-226ENST00000497311 ACVR2BQ13705 512 aa20.29■□□□□ 0.84
SMC4-226ENST00000497311 KCTD1Q719H9 257 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms