RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 CNTNAP4Q9C0A0 1308 aa10.13□□□□□ -0.79
HPS4-217ENST00000496385 UBR3Q6ZT12 1888 aa10.13□□□□□ -0.79
HPS4-217ENST00000496385 RPS6KA4O75676 772 aa10.13□□□□□ -0.79
HPS4-217ENST00000496385 PDCLQ13371 301 aa10.13□□□□□ -0.79
HPS4-217ENST00000496385 TRAPPC3LQ5T215 181 aa10.13□□□□□ -0.79
HPS4-217ENST00000496385 ZNF572Q7Z3I7 529 aaPredicted RBP10.13□□□□□ -0.79
HPS4-217ENST00000496385 MYCBPAPQ8TBZ2 947 aa10.13□□□□□ -0.79
HPS4-217ENST00000496385 C8orf76Q96K31 380 aa10.13□□□□□ -0.79
HPS4-217ENST00000496385 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.13□□□□□ -0.79
HPS4-217ENST00000496385 ZMYM6O95789 1325 aa10.13□□□□□ -0.79
HPS4-217ENST00000496385 ATP2B2Q01814 1243 aa10.13□□□□□ -0.79
HPS4-217ENST00000496385 PNOCQ13519 176 aa10.13□□□□□ -0.79
HPS4-217ENST00000496385 GLE1Q53GS7 698 aaKnown RBP10.13□□□□□ -0.79
HPS4-217ENST00000496385 CAPRIN2Q6IMN6 1127 aaKnown RBP10.13□□□□□ -0.79
HPS4-217ENST00000496385 MMS19Q96T76 1030 aa10.13□□□□□ -0.79
HPS4-217ENST00000496385 COL15A1P39059 1388 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 RFC4P35249 363 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 SARSP49591 514 aaKnown RBP10.12□□□□□ -0.79
HPS4-217ENST00000496385 IFT88Q13099 833 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 PDIA6Q15084 440 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 KANK3Q6NY19 840 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 SND1Q7KZF4 910 aaKnown RBP eCLIP10.12□□□□□ -0.79
HPS4-217ENST00000496385 AACSQ86V21 672 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 METTL16Q86W50 562 aaKnown RBP10.12□□□□□ -0.79
HPS4-217ENST00000496385 SPAG5Q96R06 1193 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 PHAXQ9H814 394 aaKnown RBP10.12□□□□□ -0.79
HPS4-217ENST00000496385 PDHBP11177 359 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 FDPSP14324 419 aaKnown RBP10.12□□□□□ -0.79
HPS4-217ENST00000496385 PDIA3P30101 505 aaKnown RBP10.12□□□□□ -0.79
HPS4-217ENST00000496385 MDH1P40925 334 aaKnown RBP10.12□□□□□ -0.79
HPS4-217ENST00000496385 MDM2Q00987 491 aaPredicted RBP10.12□□□□□ -0.79
HPS4-217ENST00000496385 MORC3Q14149 939 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 TTMPQ5BVD1 217 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 SPECC1Q5M775 1068 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 RC3H1Q5TC82 1133 aaKnown RBP10.12□□□□□ -0.79
HPS4-217ENST00000496385 BICDL1Q6ZP65 573 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 ZNF589Q86UQ0 364 aaPredicted RBP10.12□□□□□ -0.79
HPS4-217ENST00000496385 MFN1Q8IWA4 741 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 RASSF8Q8NHQ8 419 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 SCLT1Q96NL6 688 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 ANKRD27Q96NW4 1050 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 ZBTB3Q9H5J0 574 aa10.12□□□□□ -0.79
HPS4-217ENST00000496385 ADD3Q9UEY8 706 aaKnown RBP10.12□□□□□ -0.79
HPS4-217ENST00000496385 HMGB1P1B2RPK0 211 aaPredicted RBP10.11□□□□□ -0.79
HPS4-217ENST00000496385 CYP21A2P08686 494 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 PLCD1P51178 756 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 PDE4BQ07343 736 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 CCDC38Q502W7 563 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 MIS18BP1Q6P0N0 1132 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 APTXQ7Z2E3 356 aaKnown RBP10.11□□□□□ -0.79
HPS4-217ENST00000496385 TRIM58Q8NG06 486 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 TRPC6Q9Y210 931 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 LAMB4A4D0S4 1761 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 MROH7-TTC4A0A0A0MT08 1334 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 UBN2Q6ZU65 1347 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 LAMA4Q16363 1823 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 BMP6P22004 513 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 RAB27AP51159 221 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 ANKRD20A8PQ5CZ79 823 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 SPATA1Q5VX52 437 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 SHC4Q6S5L8 630 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 FOXP4Q8IVH2 680 aaPredicted RBP10.11□□□□□ -0.79
HPS4-217ENST00000496385 CCDC170Q8IYT3 715 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 KLHL23Q8NBE8 558 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 XAGE3Q8WTP9 111 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 CUL5Q93034 780 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 KDM4CQ9H3R0 1056 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 MAN1B1Q9UKM7 699 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 ZNF831Q5JPB2 1677 aa10.11□□□□□ -0.79
HPS4-217ENST00000496385 EME2A4GXA9 379 aaPredicted RBP10.1□□□□□ -0.79
HPS4-217ENST00000496385 COQ9O75208 318 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 SMNDC1O75940 238 aaKnown RBP eCLIP10.1□□□□□ -0.79
HPS4-217ENST00000496385 RTN3O95197 1032 aaPredicted RBP10.1□□□□□ -0.79
HPS4-217ENST00000496385 PRLRP16471 622 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 WASHC4Q2M389 1173 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 BEND3Q5T5X7 828 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 BZW1Q7L1Q6 419 aaKnown RBP10.1□□□□□ -0.79
HPS4-217ENST00000496385 COPS6Q7L5N1 327 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 DZIP3Q86Y13 1208 aaKnown RBP10.1□□□□□ -0.79
HPS4-217ENST00000496385 RPUSD2Q8IZ73 545 aaKnown RBP10.1□□□□□ -0.79
HPS4-217ENST00000496385 MREGQ8N565 214 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 ACRBPQ8NEB7 543 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 LUC7L3O95232 432 aaKnown RBP10.1□□□□□ -0.79
HPS4-217ENST00000496385 CASP14P31944 242 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 GUCY1B3Q02153 619 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 KIF23Q02241 960 aaPredicted RBP10.1□□□□□ -0.79
HPS4-217ENST00000496385 KCNB1Q14721 858 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 ARL8AQ96BM9 186 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 ABHD10Q9NUJ1 306 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 IRAK4Q9NWZ3 460 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 KCNH3Q9ULD8 1083 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 C15orf41Q9Y2V0 281 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 C4AP0C0L4 1744 aa10.1□□□□□ -0.79
HPS4-217ENST00000496385 A0A0U1RQJ8 604 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 C5orf60A6NFR6 353 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 ZPR1O75312 459 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 NPM3O75607 178 aaKnown RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 ATP6V1G2O95670 118 aa10.09□□□□□ -0.79
HPS4-217ENST00000496385 POLR3DP05423 398 aaPredicted RBP10.09□□□□□ -0.79
HPS4-217ENST00000496385 GSTA1P08263 222 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms