RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 MED15Q96RN5 788 aa10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 RTFDC1Q9BY42 306 aaPredicted RBP10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 FOXP1Q9H334 677 aaPredicted RBP10.3□□□□□ -0.76
TM9SF4-207ENST00000495749 FAM205AQ6ZU69 1335 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 PRPF3O43395 683 aaKnown RBP10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 CYTH3O43739 400 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 MAP3K9P80192 1104 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 INF2Q27J81 1249 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 DPP8Q6V1X1 898 aaPredicted RBP10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 ZSCAN29Q8IWY8 852 aaPredicted RBP10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 CERS5Q8N5B7 392 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 MLKLQ8NB16 471 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 ENOX1Q8TC92 643 aaKnown RBP10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 CPLX3Q8WVH0 158 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 CEP95Q96GE4 821 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 CCDC34Q96HJ3 373 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 ZCCHC17Q9NP64 241 aaKnown RBP10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 CNTNAP5Q8WYK1 1306 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 KLRF2D3W0D1 207 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 SASH3O75995 380 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 TPM1P09493 284 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 RASA1P20936 1047 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 MORC3Q14149 939 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 TTC38Q5R3I4 469 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 ZFPM1Q8IX07 1006 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 CCDC12Q8WUD4 166 aaPredicted RBP10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 PHF20Q9BVI0 1012 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 BRMS1Q9HCU9 246 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 MRFAP1Q9Y605 127 aa10.29□□□□□ -0.76
TM9SF4-207ENST00000495749 GOLGA6L9A6NEM1 432 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 TEX33O43247 280 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 BBOX1O75936 387 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 LDHCP07864 332 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 ATP2B4P23634 1241 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 CYP2C19P33261 490 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 SLC16A2P36021 539 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 NFIAQ12857 509 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 NPY5RQ15761 445 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 MRPL44Q9H9J2 332 aaKnown RBP10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 LZTFL1Q9NQ48 299 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 DDX4Q9NQI0 724 aaKnown RBP10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 USP40Q9NVE5 1235 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 DACH1Q9UI36 760 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 STK36Q9NRP7 1315 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 IRS2Q9Y4H2 1338 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 SOWAHDA6NJG2 315 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 USP17L5A8MUK1 530 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 ORC4O43929 436 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 TBC1D8O95759 1140 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 SARSP49591 514 aaKnown RBP10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 JAKMIP3Q5VZ66 844 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 CC2D1AQ6P1N0 951 aaPredicted RBP10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 MKRN1Q9UHC7 482 aaKnown RBP10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 DAGLAQ9Y4D2 1042 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 FLT1P17948 1338 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 MYH13Q9UKX3 1938 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 ONECUT3O60422 494 aaPredicted RBP10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 GSTO1P78417 241 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 NT5DC1Q5TFE4 455 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 GPR161Q8N6U8 529 aaKnown RBP10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 GJA10Q969M2 543 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 KIFC2Q96AC6 838 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 ZBTB9Q96C00 473 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 PARD6BQ9BYG5 372 aa10.28□□□□□ -0.76
TM9SF4-207ENST00000495749 A0A0U1RQJ8 604 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 ACTN4O43707 911 aaKnown RBP10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 SNAP25P60880 206 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 NR1I3Q14994 352 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 CRY2Q49AN0 593 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 ATRIPQ8WXE1 791 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 COA7Q96BR5 231 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 RBM28Q9NW13 759 aaKnown RBP10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 BIN2Q9UBW5 565 aaPredicted RBP10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 BTAF1O14981 1849 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 BRWD3Q6RI45 1802 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 LRP5O75197 1615 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 CCDC194A0A1B0GVG4 234 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 AKR1B1P15121 316 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 KIF5BP33176 963 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 RHBDL3P58872 404 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 LETM2Q2VYF4 491 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 WWC2Q6AWC2 1192 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 ELOA2Q8IYF1 753 aaPredicted RBP10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 NEK11Q8NG66 645 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 PIGSQ96S52 555 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 ARFGAP3Q9NP61 516 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 MAD2L2Q9UI95 211 aa10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 SRPRBQ9Y5M8 271 aaKnown RBP10.27□□□□□ -0.77
TM9SF4-207ENST00000495749 AKR1B15C9JRZ8 316 aaPredicted RBP10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 CCDC175P0C221 793 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 CALM1P0DP23 149 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 CALM2P0DP24 149 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 CALM3P0DP25 149 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 SRGNP10124 158 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 OAS2P29728 719 aaKnown RBP10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 NAPAP54920 295 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 EN1Q05925 392 aaPredicted RBP10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 IL17AQ16552 155 aa10.26□□□□□ -0.77
TM9SF4-207ENST00000495749 RSRC2Q7L4I2 434 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms