RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 FAM177A1Q8N128 213 aaPredicted RBP9.96□□□□□ -0.82
EPHA4-213ENST00000495693 LCORLQ8N3X6 602 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 TBC1D22AQ8WUA7 517 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 CELF1Q92879 486 aaKnown RBP9.96□□□□□ -0.82
EPHA4-213ENST00000495693 PDLIM2Q96JY6 352 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 PANK2Q9BZ23 570 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 TMX4Q9H1E5 349 aaPredicted RBP9.96□□□□□ -0.82
EPHA4-213ENST00000495693 RBSNQ9H1K0 784 aa9.96□□□□□ -0.82
EPHA4-213ENST00000495693 POLMQ9NP87 494 aaPredicted RBP9.96□□□□□ -0.82
EPHA4-213ENST00000495693 SOBPA7XYQ1 873 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 KINO60870 393 aaKnown RBP9.95□□□□□ -0.82
EPHA4-213ENST00000495693 DEXIO95424 95 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 GYG1P46976 350 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 NFX1Q12986 1120 aaKnown RBP9.95□□□□□ -0.82
EPHA4-213ENST00000495693 ZRSR1Q15695 479 aaKnown RBP9.95□□□□□ -0.82
EPHA4-213ENST00000495693 RTN1Q16799 776 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 SBK1Q52WX2 424 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 OXLD1Q5BKU9 147 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 LCE2AQ5TA79 106 aaPredicted RBP9.95□□□□□ -0.82
EPHA4-213ENST00000495693 ADALQ6DHV7 355 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 TREML4Q6UXN2 200 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 RBM43Q6ZSC3 357 aaKnown RBP9.95□□□□□ -0.82
EPHA4-213ENST00000495693 CATIPQ7Z7H3 387 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 IGDCC4Q8TDY8 1250 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 GLMNQ92990 594 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 UCN2Q96RP3 112 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 ALG1Q9BT22 464 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 CLSTN2Q9H4D0 955 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 QTRT2Q9H974 415 aaKnown RBP9.95□□□□□ -0.82
EPHA4-213ENST00000495693 LY9Q9HBG7 655 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 EPB41L4AQ9HCS5 686 aaPredicted RBP9.95□□□□□ -0.82
EPHA4-213ENST00000495693 BRMS1Q9HCU9 246 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 TOMM22Q9NS69 142 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 ANKIB1Q9P2G1 1089 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 SRP68Q9UHB9 627 aaKnown RBP9.95□□□□□ -0.82
EPHA4-213ENST00000495693 CEP131Q9UPN4 1083 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 CCDC88AQ3V6T2 1871 aa9.95□□□□□ -0.82
EPHA4-213ENST00000495693 NEDD4P46934 1319 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 ORC4O43929 436 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 DDAH1O94760 285 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 BMP15O95972 392 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 LDHBP07195 334 aaKnown RBP9.94□□□□□ -0.82
EPHA4-213ENST00000495693 FGRP09769 529 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 SKIP12755 728 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 HSPA1LP34931 641 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 FAM160A1Q05DH4 1040 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 NFIXQ14938 502 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 STK38Q15208 465 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 CRY2Q49AN0 593 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 CHST3Q7LGC8 479 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 ZSCAN30Q86W11 494 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 MICU3Q86XE3 530 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 FAM200AQ8TCP9 573 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 MRPS27Q92552 414 aaKnown RBP9.94□□□□□ -0.82
EPHA4-213ENST00000495693 NSUN4Q96CB9 384 aaKnown RBP9.94□□□□□ -0.82
EPHA4-213ENST00000495693 CRAMP1Q96RY5 1269 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 RIOK1Q9BRS2 568 aaKnown RBP9.94□□□□□ -0.82
EPHA4-213ENST00000495693 RNF26Q9BY78 433 aaPredicted RBP9.94□□□□□ -0.82
EPHA4-213ENST00000495693 NAT10Q9H0A0 1025 aaKnown RBP9.94□□□□□ -0.82
EPHA4-213ENST00000495693 NCOA5Q9HCD5 579 aaKnown RBP9.94□□□□□ -0.82
EPHA4-213ENST00000495693 ZSWIM5Q9P217 1185 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 HOOK1Q9UJC3 728 aaKnown RBP9.94□□□□□ -0.82
EPHA4-213ENST00000495693 NSFL1CQ9UNZ2 370 aaKnown RBP9.94□□□□□ -0.82
EPHA4-213ENST00000495693 SUGT1Q9Y2Z0 365 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 HRH3Q9Y5N1 445 aa9.94□□□□□ -0.82
EPHA4-213ENST00000495693 UBR3Q6ZT12 1888 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 PPP6R2O75170 966 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 HOXA10P31260 410 aaPredicted RBP9.93□□□□□ -0.82
EPHA4-213ENST00000495693 ME1P48163 572 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 DHX8Q14562 1220 aaKnown RBP9.93□□□□□ -0.82
EPHA4-213ENST00000495693 EML3Q32P44 896 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 CYB5R4Q7L1T6 521 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 NLGN1Q8N2Q7 840 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 MIGA1Q8NAN2 632 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 MAP3K14Q99558 947 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 ARHGEF10LQ9HCE6 1279 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 DACT1Q9NYF0 836 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 PODXL2Q9NZ53 605 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 USP25Q9UHP3 1055 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 GGA1Q9UJY5 639 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 MORC2Q9Y6X9 1032 aaPredicted RBP9.93□□□□□ -0.82
EPHA4-213ENST00000495693 TCHHQ07283 1943 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 CACNA1SQ13698 1873 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 LAMB1P07942 1786 aa9.93□□□□□ -0.82
EPHA4-213ENST00000495693 USP17L5A8MUK1 530 aa9.92□□□□□ -0.82
EPHA4-213ENST00000495693 MINDY4BA8MYZ0 360 aa9.92□□□□□ -0.82
EPHA4-213ENST00000495693 H3BM21 787 aa9.92□□□□□ -0.82
EPHA4-213ENST00000495693 PLSCR1O15162 318 aa9.92□□□□□ -0.82
EPHA4-213ENST00000495693 SPTLC2O15270 562 aa9.92□□□□□ -0.82
EPHA4-213ENST00000495693 SERPINB2P05120 415 aa9.92□□□□□ -0.82
EPHA4-213ENST00000495693 PTMAP06454 111 aaKnown RBP9.92□□□□□ -0.82
EPHA4-213ENST00000495693 FDPSP14324 419 aaKnown RBP9.92□□□□□ -0.82
EPHA4-213ENST00000495693 TM4SF1P30408 202 aa9.92□□□□□ -0.82
EPHA4-213ENST00000495693 KIF5BP33176 963 aa9.92□□□□□ -0.82
EPHA4-213ENST00000495693 RBM6P78332 1123 aaKnown RBP9.92□□□□□ -0.82
EPHA4-213ENST00000495693 KIF23Q02241 960 aaPredicted RBP9.92□□□□□ -0.82
EPHA4-213ENST00000495693 RILPL1Q5EBL4 403 aa9.92□□□□□ -0.82
EPHA4-213ENST00000495693 RRP12Q5JTH9 1297 aaKnown RBP9.92□□□□□ -0.82
EPHA4-213ENST00000495693 IFIT1BQ5T764 474 aaKnown RBP9.92□□□□□ -0.82
EPHA4-213ENST00000495693 PRR5LQ6MZQ0 368 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms