RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 CAVIN2O95810 425 aa18.74■□□□□ 0.59
CBX4-204ENST00000495122 TROAPQ12815 778 aa18.74■□□□□ 0.59
CBX4-204ENST00000495122 TAF1CQ15572 869 aaPredicted RBP18.74■□□□□ 0.59
CBX4-204ENST00000495122 ZFPM1Q8IX07 1006 aa18.74■□□□□ 0.59
CBX4-204ENST00000495122 TEX11Q8IYF3 940 aa18.74■□□□□ 0.59
CBX4-204ENST00000495122 PGBD1Q96JS3 809 aa18.74■□□□□ 0.59
CBX4-204ENST00000495122 PPP1R9BQ96SB3 815 aa18.74■□□□□ 0.59
CBX4-204ENST00000495122 ZKSCAN3Q9BRR0 538 aa18.74■□□□□ 0.59
CBX4-204ENST00000495122 FOXP1Q9H334 677 aaPredicted RBP18.74■□□□□ 0.59
CBX4-204ENST00000495122 ZCCHC17Q9NP64 241 aaKnown RBP18.74■□□□□ 0.59
CBX4-204ENST00000495122 COL2A1P02458 1487 aaPredicted RBP18.73■□□□□ 0.59
CBX4-204ENST00000495122 ENTPD3O75355 529 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 CCDC192P0DO97 292 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 CETPP11597 493 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 GNAQP50148 359 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 CAP1Q01518 475 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 GUCY1B3Q02153 619 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 SP3Q02447 781 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 PPATQ06203 517 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 GNL2Q13823 731 aaKnown RBP18.73■□□□□ 0.59
CBX4-204ENST00000495122 STK38Q15208 465 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 NOL9Q5SY16 702 aaKnown RBP18.73■□□□□ 0.59
CBX4-204ENST00000495122 ADALQ6DHV7 355 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 CCDC73Q6ZRK6 1079 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 C16orf86Q6ZW13 317 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 RAB11FIP4Q86YS3 637 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 LINC00301Q8NCQ3 95 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 CTCFLQ8NI51 663 aaPredicted RBP18.73■□□□□ 0.59
CBX4-204ENST00000495122 PHKBQ93100 1093 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 MYL10Q9BUA6 226 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 RBSNQ9H1K0 784 aa18.73■□□□□ 0.59
CBX4-204ENST00000495122 PPP6R2O75170 966 aa18.72■□□□□ 0.59
CBX4-204ENST00000495122 WDHD1O75717 1129 aaPredicted RBP18.72■□□□□ 0.59
CBX4-204ENST00000495122 SLC34A2O95436 690 aa18.72■□□□□ 0.59
CBX4-204ENST00000495122 MMP1P03956 469 aa18.72■□□□□ 0.59
CBX4-204ENST00000495122 POLR3DP05423 398 aaPredicted RBP18.72■□□□□ 0.59
CBX4-204ENST00000495122 RXRAP19793 462 aa18.72■□□□□ 0.59
CBX4-204ENST00000495122 RHBDL3P58872 404 aa18.72■□□□□ 0.59
CBX4-204ENST00000495122 SNAPC2Q13487 334 aa18.72■□□□□ 0.59
CBX4-204ENST00000495122 TMTC3Q6ZXV5 915 aa18.72■□□□□ 0.59
CBX4-204ENST00000495122 NUP133Q8WUM0 1156 aa18.72■□□□□ 0.59
CBX4-204ENST00000495122 FUCA2Q9BTY2 467 aa18.72■□□□□ 0.59
CBX4-204ENST00000495122 MKNK2Q9HBH9 465 aa18.72■□□□□ 0.59
CBX4-204ENST00000495122 ZFYVE28Q9HCC9 887 aa18.72■□□□□ 0.59
CBX4-204ENST00000495122 MYH6P13533 1939 aa18.72■□□□□ 0.59
CBX4-204ENST00000495122 FLT1P17948 1338 aa18.72■□□□□ 0.59
CBX4-204ENST00000495122 BTBD19C9JJ37 291 aa18.71■□□□□ 0.59
CBX4-204ENST00000495122 FOSBP53539 338 aa18.71■□□□□ 0.59
CBX4-204ENST00000495122 FAM160A1Q05DH4 1040 aa18.71■□□□□ 0.59
CBX4-204ENST00000495122 ANO1Q5XXA6 986 aa18.71■□□□□ 0.59
CBX4-204ENST00000495122 SH3BP5LQ7L8J4 393 aa18.71■□□□□ 0.59
CBX4-204ENST00000495122 CCDC144CPQ8IYA2 1237 aa18.71■□□□□ 0.59
CBX4-204ENST00000495122 ZNF444Q8N0Y2 327 aaPredicted RBP18.71■□□□□ 0.59
CBX4-204ENST00000495122 TGFBRAP1Q8WUH2 860 aa18.71■□□□□ 0.59
CBX4-204ENST00000495122 TNMDQ9H2S6 317 aa18.71■□□□□ 0.59
CBX4-204ENST00000495122 DDX4Q9NQI0 724 aaKnown RBP18.71■□□□□ 0.59
CBX4-204ENST00000495122 DACT1Q9NYF0 836 aa18.71■□□□□ 0.59
CBX4-204ENST00000495122 PLIN4Q96Q06 1357 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 BRCA2P51587 3418 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 SPTLC2O15270 562 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 PRDM1O75626 825 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 CYP2D6P10635 497 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 LIG1P18858 919 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 ME1P48163 572 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 FUT2Q10981 343 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 SLC39A14Q15043 492 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 SF3A1Q15459 793 aaKnown RBP18.7■□□□□ 0.58
CBX4-204ENST00000495122 RILPL1Q5EBL4 403 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 PPP4R3BQ5MIZ7 849 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 NOSTRINQ8IVI9 506 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 MRPS27Q92552 414 aaKnown RBP18.7■□□□□ 0.58
CBX4-204ENST00000495122 LZTS2Q9BRK4 669 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.7■□□□□ 0.58
CBX4-204ENST00000495122 PANK2Q9BZ23 570 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 KAT14Q9H8E8 782 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 KCNH4Q9UQ05 1017 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 PTPN22Q9Y2R2 807 aa18.7■□□□□ 0.58
CBX4-204ENST00000495122 DDTLA6NHG4 134 aaPredicted RBP18.69■□□□□ 0.58
CBX4-204ENST00000495122 PHF20L1A8MW92 1017 aa18.69■□□□□ 0.58
CBX4-204ENST00000495122 KIF28PB7ZC32 967 aa18.69■□□□□ 0.58
CBX4-204ENST00000495122 HS1BP3Q53T59 392 aa18.69■□□□□ 0.58
CBX4-204ENST00000495122 EFCC1Q9HA90 598 aa18.69■□□□□ 0.58
CBX4-204ENST00000495122 BRMS1Q9HCU9 246 aa18.69■□□□□ 0.58
CBX4-204ENST00000495122 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.69■□□□□ 0.58
CBX4-204ENST00000495122 TLR2O60603 784 aa18.68■□□□□ 0.58
CBX4-204ENST00000495122 KINO60870 393 aaKnown RBP18.68■□□□□ 0.58
CBX4-204ENST00000495122 NPM3O75607 178 aaKnown RBP18.68■□□□□ 0.58
CBX4-204ENST00000495122 TSPY3P0CV98 308 aa18.68■□□□□ 0.58
CBX4-204ENST00000495122 TSPY8P0CW00 308 aa18.68■□□□□ 0.58
CBX4-204ENST00000495122 TFAP4Q01664 338 aa18.68■□□□□ 0.58
CBX4-204ENST00000495122 MAP3K10Q02779 954 aa18.68■□□□□ 0.58
CBX4-204ENST00000495122 MOGSQ13724 837 aa18.68■□□□□ 0.58
CBX4-204ENST00000495122 RCSD1Q6JBY9 416 aa18.68■□□□□ 0.58
CBX4-204ENST00000495122 MAPKAPK5Q8IW41 473 aa18.68■□□□□ 0.58
CBX4-204ENST00000495122 CCAR1Q8IX12 1150 aaKnown RBP18.68■□□□□ 0.58
CBX4-204ENST00000495122 STK11IPQ8N1F8 1099 aa18.68■□□□□ 0.58
CBX4-204ENST00000495122 NEDD1Q8NHV4 660 aa18.68■□□□□ 0.58
CBX4-204ENST00000495122 PDLIM2Q96JY6 352 aa18.68■□□□□ 0.58
CBX4-204ENST00000495122 SH3GLB2Q9NR46 395 aa18.68■□□□□ 0.58
CBX4-204ENST00000495122 SWAP70Q9UH65 585 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms