RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 PNMA1Q8ND90 353 aa20.11■□□□□ 0.81
SNX17-209ENST00000494893 NCOA7Q8NI08 942 aa20.11■□□□□ 0.81
SNX17-209ENST00000494893 RIPK3Q9Y572 518 aa20.11■□□□□ 0.81
SNX17-209ENST00000494893 ZNF536O15090 1300 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 SLC16A2P36021 539 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 STAT3P40763 770 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 SNAP25P60880 206 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 ZNF543Q08ER8 600 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 GRB14Q14449 540 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 CCDC96Q2M329 555 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 C8orf34Q49A92 452 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 WDR78Q5VTH9 848 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 RALYLQ86SE5 291 aaKnown RBP20.1■□□□□ 0.81
SNX17-209ENST00000494893 FAM160B2Q86V87 743 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 CHURC1Q8WUH1 139 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 NUDT12Q9BQG2 462 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 UBAC1Q9BSL1 405 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 GPCPD1Q9NPB8 672 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 GPHNQ9NQX3 736 aaPredicted RBP20.1■□□□□ 0.81
SNX17-209ENST00000494893 PRR12Q9ULL5 1215 aa20.1■□□□□ 0.81
SNX17-209ENST00000494893 ISY1Q9ULR0 285 aaKnown RBP20.1■□□□□ 0.81
SNX17-209ENST00000494893 SLC15A5A6NIM6 579 aa20.09■□□□□ 0.81
SNX17-209ENST00000494893 ATP2A1O14983 1001 aa20.09■□□□□ 0.81
SNX17-209ENST00000494893 CYP2B6P20813 491 aa20.09■□□□□ 0.81
SNX17-209ENST00000494893 MTFR1Q15390 333 aa20.09■□□□□ 0.81
SNX17-209ENST00000494893 NCAPG2Q86XI2 1143 aa20.09■□□□□ 0.81
SNX17-209ENST00000494893 CCAR1Q8IX12 1150 aaKnown RBP20.09■□□□□ 0.81
SNX17-209ENST00000494893 SLAIN1Q8ND83 568 aa20.09■□□□□ 0.81
SNX17-209ENST00000494893 PXYLP1Q8TE99 480 aa20.09■□□□□ 0.81
SNX17-209ENST00000494893 SOCS4Q8WXH5 440 aa20.09■□□□□ 0.81
SNX17-209ENST00000494893 KAT14Q9H8E8 782 aa20.09■□□□□ 0.81
SNX17-209ENST00000494893 RAVER2Q9HCJ3 691 aaKnown RBP20.09■□□□□ 0.81
SNX17-209ENST00000494893 ZBED4O75132 1171 aa20.08■□□□□ 0.81
SNX17-209ENST00000494893 GOLGA8HP0CJ92 632 aa20.08■□□□□ 0.81
SNX17-209ENST00000494893 SOX10P56693 466 aa20.08■□□□□ 0.81
SNX17-209ENST00000494893 TRIM32Q13049 653 aa20.08■□□□□ 0.81
SNX17-209ENST00000494893 MAP2K5Q13163 448 aa20.08■□□□□ 0.81
SNX17-209ENST00000494893 CCL14Q16627 93 aa20.08■□□□□ 0.81
SNX17-209ENST00000494893 SNRNP48Q6IEG0 339 aaKnown RBP20.08■□□□□ 0.81
SNX17-209ENST00000494893 CPXCR1Q8N123 301 aa20.08■□□□□ 0.81
SNX17-209ENST00000494893 IGDCC4Q8TDY8 1250 aa20.08■□□□□ 0.81
SNX17-209ENST00000494893 TRIB2Q92519 343 aa20.08■□□□□ 0.81
SNX17-209ENST00000494893 KCNB2Q92953 911 aa20.08■□□□□ 0.81
SNX17-209ENST00000494893 TEX13BQ9BXU2 312 aa20.08■□□□□ 0.81
SNX17-209ENST00000494893 CPVLQ9H3G5 476 aa20.08■□□□□ 0.81
SNX17-209ENST00000494893 MROH8Q9H579 483 aa20.08■□□□□ 0.81
SNX17-209ENST00000494893 ZNF236Q9UL36 1845 aa20.07■□□□□ 0.8
SNX17-209ENST00000494893 IFIT3O14879 490 aaKnown RBP20.07■□□□□ 0.8
SNX17-209ENST00000494893 COBLO75128 1261 aa20.07■□□□□ 0.8
SNX17-209ENST00000494893 SLC25A27O95847 323 aa20.07■□□□□ 0.8
SNX17-209ENST00000494893 MYCP01106 439 aaPredicted RBP20.07■□□□□ 0.8
SNX17-209ENST00000494893 TAL1P17542 331 aaPredicted RBP20.07■□□□□ 0.8
SNX17-209ENST00000494893 IKQ13123 557 aaPredicted RBP20.07■□□□□ 0.8
SNX17-209ENST00000494893 ADCK5Q3MIX3 580 aa20.07■□□□□ 0.8
SNX17-209ENST00000494893 TSGA10IPQ3SY00 556 aa20.07■□□□□ 0.8
SNX17-209ENST00000494893 IFIT1BQ5T764 474 aaKnown RBP20.07■□□□□ 0.8
SNX17-209ENST00000494893 SYDE2Q5VT97 1194 aa20.07■□□□□ 0.8
SNX17-209ENST00000494893 NPLOC4Q8TAT6 608 aa20.07■□□□□ 0.8
SNX17-209ENST00000494893 BACH2Q9BYV9 841 aa20.07■□□□□ 0.8
SNX17-209ENST00000494893 IGHA2P01877 340 aa20.06■□□□□ 0.8
SNX17-209ENST00000494893 INHAP05111 366 aa20.06■□□□□ 0.8
SNX17-209ENST00000494893 HOXC6P09630 235 aa20.06■□□□□ 0.8
SNX17-209ENST00000494893 XRCC5P13010 732 aaKnown RBP20.06■□□□□ 0.8
SNX17-209ENST00000494893 ADORA2AP29274 412 aa20.06■□□□□ 0.8
SNX17-209ENST00000494893 RGS2P41220 211 aa20.06■□□□□ 0.8
SNX17-209ENST00000494893 NBPF11Q86T75 865 aa20.06■□□□□ 0.8
SNX17-209ENST00000494893 AGBL1Q96MI9 1066 aa20.06■□□□□ 0.8
SNX17-209ENST00000494893 APBA2Q99767 749 aa20.06■□□□□ 0.8
SNX17-209ENST00000494893 RANBP17Q9H2T7 1088 aaKnown RBP20.06■□□□□ 0.8
SNX17-209ENST00000494893 CWC22Q9HCG8 908 aaKnown RBP20.06■□□□□ 0.8
SNX17-209ENST00000494893 FLRT1Q9NZU1 646 aa20.06■□□□□ 0.8
SNX17-209ENST00000494893 POTEFA5A3E0 1075 aa20.05■□□□□ 0.8
SNX17-209ENST00000494893 PRC1O43663 620 aa20.05■□□□□ 0.8
SNX17-209ENST00000494893 STRNO43815 780 aa20.05■□□□□ 0.8
SNX17-209ENST00000494893 FDX1P10109 184 aa20.05■□□□□ 0.8
SNX17-209ENST00000494893 HSPA4P34932 840 aa20.05■□□□□ 0.8
SNX17-209ENST00000494893 OAZ1P54368 228 aa20.05■□□□□ 0.8
SNX17-209ENST00000494893 TMEM67Q5HYA8 995 aa20.05■□□□□ 0.8
SNX17-209ENST00000494893 ABRAQ8N0Z2 381 aa20.05■□□□□ 0.8
SNX17-209ENST00000494893 UBA5Q9GZZ9 404 aa20.05■□□□□ 0.8
SNX17-209ENST00000494893 LY9Q9HBG7 655 aa20.05■□□□□ 0.8
SNX17-209ENST00000494893 IVNS1ABPQ9Y6Y0 642 aa20.05■□□□□ 0.8
SNX17-209ENST00000494893 BRCA2P51587 3418 aa20.04■□□□□ 0.8
SNX17-209ENST00000494893 SH2B2O14492 632 aaPredicted RBP20.04■□□□□ 0.8
SNX17-209ENST00000494893 WTAPQ15007 396 aa20.04■□□□□ 0.8
SNX17-209ENST00000494893 SLC35G1Q2M3R5 365 aa20.04■□□□□ 0.8
SNX17-209ENST00000494893 GPATCH4Q5T3I0 446 aaKnown RBP20.04■□□□□ 0.8
SNX17-209ENST00000494893 RNF20Q5VTR2 975 aa20.04■□□□□ 0.8
SNX17-209ENST00000494893 CCDC174Q6PII3 467 aa20.04■□□□□ 0.8
SNX17-209ENST00000494893 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.04■□□□□ 0.8
SNX17-209ENST00000494893 STAG2Q8N3U4 1231 aa20.04■□□□□ 0.8
SNX17-209ENST00000494893 HMGCRP04035 888 aa20.03■□□□□ 0.8
SNX17-209ENST00000494893 MCM5P33992 734 aa20.03■□□□□ 0.8
SNX17-209ENST00000494893 COPB2P35606 906 aa20.03■□□□□ 0.8
SNX17-209ENST00000494893 SLC4A3P48751 1232 aa20.03■□□□□ 0.8
SNX17-209ENST00000494893 TROAPQ12815 778 aa20.03■□□□□ 0.8
SNX17-209ENST00000494893 MAP3K21Q5TCX8 1036 aa20.03■□□□□ 0.8
SNX17-209ENST00000494893 MTA3Q9BTC8 594 aa20.03■□□□□ 0.8
SNX17-209ENST00000494893 LRRC2Q9BYS8 371 aa20.03■□□□□ 0.8
SNX17-209ENST00000494893 UNC93B1Q9H1C4 597 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms