RNA–Protein interactions for RNA: ENST00000494746.1

CALCA-206, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 1,837 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-206ENST00000494746 USP17L24Q0WX57 530 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 ME3Q16798 604 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 ASPRV1Q53RT3 343 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 SAMD1Q6SPF0 538 aaPredicted RBP11.21□□□□□ -0.62
CALCA-206ENST00000494746 SYNE3Q6ZMZ3 975 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 NBPF11Q86T75 865 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 CMTR1Q8N1G2 835 aaKnown RBP11.21□□□□□ -0.62
CALCA-206ENST00000494746 FANCBQ8NB91 859 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 ZNF274Q96GC6 653 aaPredicted RBP11.21□□□□□ -0.62
CALCA-206ENST00000494746 MAP3K14Q99558 947 aa11.21□□□□□ -0.62
CALCA-206ENST00000494746 NCOA5Q9HCD5 579 aaKnown RBP11.21□□□□□ -0.62
CALCA-206ENST00000494746 FAM217BQ9NTX9 383 aaPredicted RBP11.21□□□□□ -0.62
CALCA-206ENST00000494746 GOLGA8AA7E2F4 631 aa11.2□□□□□ -0.62
CALCA-206ENST00000494746 PLEKHA8P1O95397 391 aa11.2□□□□□ -0.62
CALCA-206ENST00000494746 RCAN1P53805 252 aa11.2□□□□□ -0.62
CALCA-206ENST00000494746 IRX3P78415 501 aaPredicted RBP11.2□□□□□ -0.62
CALCA-206ENST00000494746 RTN1Q16799 776 aa11.2□□□□□ -0.62
CALCA-206ENST00000494746 SLC35G1Q2M3R5 365 aa11.2□□□□□ -0.62
CALCA-206ENST00000494746 GPATCH4Q5T3I0 446 aaKnown RBP11.2□□□□□ -0.62
CALCA-206ENST00000494746 POTEEQ6S8J3 1075 aa11.2□□□□□ -0.62
CALCA-206ENST00000494746 CTCFLQ8NI51 663 aaPredicted RBP11.2□□□□□ -0.62
CALCA-206ENST00000494746 SLF1Q9BQI6 1058 aa11.2□□□□□ -0.62
CALCA-206ENST00000494746 SLC45A1Q9Y2W3 748 aa11.2□□□□□ -0.62
CALCA-206ENST00000494746 SPDYE16A6NNV3 312 aaPredicted RBP11.19□□□□□ -0.62
CALCA-206ENST00000494746 ADD1P35611 737 aaKnown RBP11.19□□□□□ -0.62
CALCA-206ENST00000494746 ST3GAL1Q11201 340 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 SCRN1Q12765 414 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 IKQ13123 557 aaPredicted RBP11.19□□□□□ -0.62
CALCA-206ENST00000494746 TMTC3Q6ZXV5 915 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 KIFC2Q96AC6 838 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 P2RX7Q99572 595 aaKnown RBP11.19□□□□□ -0.62
CALCA-206ENST00000494746 UBA5Q9GZZ9 404 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 FEM1BQ9UK73 627 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 PPP1R9AQ9ULJ8 1098 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 LIMCH1Q9UPQ0 1083 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 KLRF2D3W0D1 207 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 CYTH3O43739 400 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 PEX10O60683 326 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 PFKFB2O60825 505 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 PPFIA3O75145 1194 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 KIF5BP33176 963 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 HERVK_113P62684 666 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 PABPC4Q13310 644 aaKnown RBP eCLIP11.19□□□□□ -0.62
CALCA-206ENST00000494746 COG2Q14746 738 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 BTNL9Q6UXG8 535 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 SRBD1Q8N5C6 995 aaKnown RBP11.19□□□□□ -0.62
CALCA-206ENST00000494746 NECAB1Q8N987 351 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 ATG4CQ96DT6 458 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 PARK7Q99497 189 aaKnown RBP11.19□□□□□ -0.62
CALCA-206ENST00000494746 ZCCHC17Q9NP64 241 aaKnown RBP11.19□□□□□ -0.62
CALCA-206ENST00000494746 PNMA3Q9UL41 463 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 PRR12Q9ULL5 1215 aa11.19□□□□□ -0.62
CALCA-206ENST00000494746 ADGRA2Q96PE1 1338 aa11.18□□□□□ -0.62
CALCA-206ENST00000494746 PLA2G6O60733 806 aa11.18□□□□□ -0.62
CALCA-206ENST00000494746 DTNBO60941 627 aa11.18□□□□□ -0.62
CALCA-206ENST00000494746 OSBPP22059 807 aa11.18□□□□□ -0.62
CALCA-206ENST00000494746 DSG3P32926 999 aa11.18□□□□□ -0.62
CALCA-206ENST00000494746 SNAP25P60880 206 aa11.18□□□□□ -0.62
CALCA-206ENST00000494746 FUT2Q10981 343 aa11.18□□□□□ -0.62
CALCA-206ENST00000494746 CRHR2Q13324 411 aa11.18□□□□□ -0.62
CALCA-206ENST00000494746 TAF1CQ15572 869 aaPredicted RBP11.18□□□□□ -0.62
CALCA-206ENST00000494746 SYDE2Q5VT97 1194 aa11.18□□□□□ -0.62
CALCA-206ENST00000494746 REM2Q8IYK8 340 aaPredicted RBP11.18□□□□□ -0.62
CALCA-206ENST00000494746 ADGRF4Q8IZF3 695 aa11.18□□□□□ -0.62
CALCA-206ENST00000494746 CCDC82Q8N4S0 544 aa11.18□□□□□ -0.62
CALCA-206ENST00000494746 PRPF38AQ8NAV1 312 aaKnown RBP11.18□□□□□ -0.62
CALCA-206ENST00000494746 SMCR8Q8TEV9 937 aaPredicted RBP11.18□□□□□ -0.62
CALCA-206ENST00000494746 GTF3C6Q969F1 213 aa11.18□□□□□ -0.62
CALCA-206ENST00000494746 SLKQ9H2G2 1235 aaPredicted RBP11.18□□□□□ -0.62
CALCA-206ENST00000494746 RBM28Q9NW13 759 aaKnown RBP11.18□□□□□ -0.62
CALCA-206ENST00000494746 MYPNQ86TC9 1320 aa11.17□□□□□ -0.62
CALCA-206ENST00000494746 CNTNAP5Q8WYK1 1306 aa11.17□□□□□ -0.62
CALCA-206ENST00000494746 VWA5AO00534 786 aa11.17□□□□□ -0.62
CALCA-206ENST00000494746 NTRK3Q16288 839 aa11.17□□□□□ -0.62
CALCA-206ENST00000494746 OTUD7BQ6GQQ9 843 aa11.17□□□□□ -0.62
CALCA-206ENST00000494746 FAM160B2Q86V87 743 aa11.17□□□□□ -0.62
CALCA-206ENST00000494746 CHURC1Q8WUH1 139 aa11.17□□□□□ -0.62
CALCA-206ENST00000494746 TMX3Q96JJ7 454 aa11.17□□□□□ -0.62
CALCA-206ENST00000494746 R3HDMLQ9H3Y0 253 aa11.17□□□□□ -0.62
CALCA-206ENST00000494746 JMJD4Q9H9V9 463 aa11.17□□□□□ -0.62
CALCA-206ENST00000494746 TXNRD2Q9NNW7 524 aa11.17□□□□□ -0.62
CALCA-206ENST00000494746 ADAMTS5Q9UNA0 930 aa11.17□□□□□ -0.62
CALCA-206ENST00000494746 CCDC196A0A1B0GTZ2 297 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 DHX16O60231 1041 aaKnown RBP11.16□□□□□ -0.62
CALCA-206ENST00000494746 TAL1P17542 331 aaPredicted RBP11.16□□□□□ -0.62
CALCA-206ENST00000494746 MCM2P49736 904 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 BECN1Q14457 450 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 LBX2Q6XYB7 198 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 REPS2Q8NFH8 660 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 PIBF1Q8WXW3 757 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 SPZ1Q9BXG8 430 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 RIOX1Q9H6W3 641 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 SLC38A10Q9HBR0 1119 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 VAT1LQ9HCJ6 419 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 HOXC10Q9NYD6 342 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 ZNF536O15090 1300 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 hCG_1642624A0A1W2PR95 340 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 CA12O43570 354 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 TRPA1O75762 1119 aa11.16□□□□□ -0.62
CALCA-206ENST00000494746 CNMDO75829 334 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms