RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 TUBB8Q3ZCM7 444 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 ZNF572Q7Z3I7 529 aaPredicted RBP11.31□□□□□ -0.6
LINC00488-201ENST00000494582 DIS3L2Q8IYB7 885 aaKnown RBP11.31□□□□□ -0.6
LINC00488-201ENST00000494582 ARMC2Q8NEN0 867 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 MICAL1Q8TDZ2 1067 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 SPDL1Q96EA4 605 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 NUP58Q9BVL2 599 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 SLC26A6Q9BXS9 759 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 PUS7LQ9H0K6 701 aaKnown RBP11.31□□□□□ -0.6
LINC00488-201ENST00000494582 MLXIPQ9HAP2 919 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 INCENPQ9NQS7 918 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 STRN4Q9NRL3 753 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 AGPAT5Q9NUQ2 364 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 RBM28Q9NW13 759 aaKnown RBP11.31□□□□□ -0.6
LINC00488-201ENST00000494582 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC00488-201ENST00000494582 MYH13Q9UKX3 1938 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 ANO9A1A5B4 782 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 WNT7AO00755 349 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 NCK2O43639 380 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 HPDP32754 393 aaPredicted RBP11.31□□□□□ -0.6
LINC00488-201ENST00000494582 IARSP41252 1262 aaKnown RBP11.31□□□□□ -0.6
LINC00488-201ENST00000494582 PIP4K2AP48426 406 aaPredicted RBP11.31□□□□□ -0.6
LINC00488-201ENST00000494582 KLK7P49862 253 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 GUCY2FP51841 1108 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 ADCY2Q08462 1091 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 ZKSCAN8Q15776 578 aaPredicted RBP11.31□□□□□ -0.6
LINC00488-201ENST00000494582 KRT26Q7Z3Y9 468 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 RALYLQ86SE5 291 aaKnown RBP11.31□□□□□ -0.6
LINC00488-201ENST00000494582 NSMCE1Q8WV22 266 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 ZBTB10Q96DT7 871 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 BORCS6Q96GS4 357 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 ACTR5Q9H9F9 607 aaPredicted RBP11.31□□□□□ -0.6
LINC00488-201ENST00000494582 RBM12Q9NTZ6 932 aaKnown RBP11.31□□□□□ -0.6
LINC00488-201ENST00000494582 ANGEL1Q9UNK9 670 aaKnown RBP11.31□□□□□ -0.6
LINC00488-201ENST00000494582 MAPK8IP1Q9UQF2 711 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 RIPOR2Q9Y4F9 1068 aa11.31□□□□□ -0.6
LINC00488-201ENST00000494582 ENO4A6NNW6 628 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 KRT86O43790 486 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 ATP6V1G2O95670 118 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 ELF3P78545 371 aaPredicted RBP11.3□□□□□ -0.6
LINC00488-201ENST00000494582 XRCC4Q13426 336 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 KCTD19Q17RG1 926 aaPredicted RBP11.3□□□□□ -0.6
LINC00488-201ENST00000494582 RABL6Q3YEC7 729 aaPredicted RBP11.3□□□□□ -0.6
LINC00488-201ENST00000494582 CFAP58Q5T655 872 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 ZNF579Q8NAF0 562 aaKnown RBP11.3□□□□□ -0.6
LINC00488-201ENST00000494582 ATP6V1G3Q96LB4 118 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 NOD2Q9HC29 1040 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 DDX21Q9NR30 783 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC00488-201ENST00000494582 GOLGA6L7A0A1B0GV03 622 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 MMP1P03956 469 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 TMOD1P28289 359 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 SLC8A3P57103 927 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 MYO1EQ12965 1108 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 SNX1Q13596 522 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 TRIM29Q14134 588 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 TRIM14Q14142 442 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 WASHC4Q2M389 1173 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 RCSD1Q6JBY9 416 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 KANK3Q6NY19 840 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 ZNF662Q6ZS27 426 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 XAGE3Q8WTP9 111 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 MS4A14Q96JA4 679 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 LUC7L2Q9Y383 392 aaKnown RBP11.3□□□□□ -0.6
LINC00488-201ENST00000494582 MYH10P35580 1976 aa11.3□□□□□ -0.6
LINC00488-201ENST00000494582 XDHP47989 1333 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 ANKRD18BA2A2Z9 1011 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 TRIM49BA6NDI0 452 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 PLEKP08567 350 aaPredicted RBP11.29□□□□□ -0.6
LINC00488-201ENST00000494582 IFIT1P09914 478 aaKnown RBP11.29□□□□□ -0.6
LINC00488-201ENST00000494582 CALRP27797 417 aaKnown RBP11.29□□□□□ -0.6
LINC00488-201ENST00000494582 RRAGBQ5VZM2 374 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 ZNF530Q6P9A1 599 aaPredicted RBP11.29□□□□□ -0.6
LINC00488-201ENST00000494582 BZW1Q7L1Q6 419 aaKnown RBP11.29□□□□□ -0.6
LINC00488-201ENST00000494582 GPIHBP1Q8IV16 184 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 CMTR1Q8N1G2 835 aaKnown RBP11.29□□□□□ -0.6
LINC00488-201ENST00000494582 MB21D1Q8N884 522 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 SYMPKQ92797 1274 aaKnown RBP11.29□□□□□ -0.6
LINC00488-201ENST00000494582 SHISA4Q96DD7 197 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 OSBPL9Q96SU4 736 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 MTRQ99707 1265 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 NHEJ1Q9H9Q4 299 aaPredicted RBP11.29□□□□□ -0.6
LINC00488-201ENST00000494582 LRWD1Q9UFC0 647 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 L3MBTL1Q9Y468 752 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 MARF1Q9Y4F3 1742 aaKnown RBP11.29□□□□□ -0.6
LINC00488-201ENST00000494582 MOCS3O95396 460 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 DDX58O95786 925 aaKnown RBP11.29□□□□□ -0.6
LINC00488-201ENST00000494582 FKBP4Q02790 459 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC00488-201ENST00000494582 MEA1Q16626 185 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 EARS2Q5JPH6 523 aaKnown RBP11.29□□□□□ -0.6
LINC00488-201ENST00000494582 CCDC70Q6NSX1 233 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 CCDC26Q8TAB7 109 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 ZNF507Q8TCN5 953 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 IFT81Q8WYA0 676 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 SEC16BQ96JE7 1060 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 ETAA1Q9NY74 926 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 CNOT8Q9UFF9 292 aaKnown RBP11.29□□□□□ -0.6
LINC00488-201ENST00000494582 CAPN11Q9UMQ6 739 aa11.29□□□□□ -0.6
LINC00488-201ENST00000494582 B4E1Z4 1266 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 ATP5J2-PTCD1G3V325 749 aa11.28□□□□□ -0.6
LINC00488-201ENST00000494582 ZNF213O14771 459 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms