RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 ATG9AQ7Z3C6 839 aa13.53□□□□□ -0.24
TRIM59-206ENST00000494486 ACER1Q8TDN7 264 aa13.53□□□□□ -0.24
TRIM59-206ENST00000494486 SH3RF3Q8TEJ3 882 aaPredicted RBP13.53□□□□□ -0.24
TRIM59-206ENST00000494486 NSUN4Q96CB9 384 aaKnown RBP13.53□□□□□ -0.24
TRIM59-206ENST00000494486 POP1Q99575 1024 aaKnown RBP13.53□□□□□ -0.24
TRIM59-206ENST00000494486 NOL10Q9BSC4 688 aaKnown RBP13.53□□□□□ -0.24
TRIM59-206ENST00000494486 SUGCTQ9HAC7 445 aa13.53□□□□□ -0.24
TRIM59-206ENST00000494486 PTPRZ1P23471 2315 aaPredicted RBP13.53□□□□□ -0.24
TRIM59-206ENST00000494486 PRR23AA6NEV1 266 aa13.52□□□□□ -0.25
TRIM59-206ENST00000494486 H3BQ06 376 aaPredicted RBP13.52□□□□□ -0.25
TRIM59-206ENST00000494486 HLA-DOAP06340 250 aa13.52□□□□□ -0.25
TRIM59-206ENST00000494486 IRX5P78411 483 aaPredicted RBP13.52□□□□□ -0.25
TRIM59-206ENST00000494486 RAB3GAP1Q15042 981 aa13.52□□□□□ -0.25
TRIM59-206ENST00000494486 SPRED2Q7Z698 418 aa13.52□□□□□ -0.25
TRIM59-206ENST00000494486 SIL1Q9H173 461 aa13.52□□□□□ -0.25
TRIM59-206ENST00000494486 FBXO3Q9UK99 471 aa13.52□□□□□ -0.25
TRIM59-206ENST00000494486 SPTBN4Q9H254 2564 aa13.52□□□□□ -0.25
TRIM59-206ENST00000494486 MED19A0JLT2 244 aaPredicted RBP13.51□□□□□ -0.25
TRIM59-206ENST00000494486 BAG3O95817 575 aa13.51□□□□□ -0.25
TRIM59-206ENST00000494486 SNAI1O95863 264 aaPredicted RBP13.51□□□□□ -0.25
TRIM59-206ENST00000494486 PLCG2P16885 1265 aa13.51□□□□□ -0.25
TRIM59-206ENST00000494486 DSG3P32926 999 aa13.51□□□□□ -0.25
TRIM59-206ENST00000494486 NUBP1P53384 320 aa13.51□□□□□ -0.25
TRIM59-206ENST00000494486 NKX3-2P78367 333 aa13.51□□□□□ -0.25
TRIM59-206ENST00000494486 ITGA7Q13683 1181 aa13.51□□□□□ -0.25
TRIM59-206ENST00000494486 TATDN1Q6P1N9 297 aa13.51□□□□□ -0.25
TRIM59-206ENST00000494486 DEFB128Q7Z7B8 93 aa13.51□□□□□ -0.25
TRIM59-206ENST00000494486 RNF135Q8IUD6 432 aa13.51□□□□□ -0.25
TRIM59-206ENST00000494486 TGFBRAP1Q8WUH2 860 aa13.51□□□□□ -0.25
TRIM59-206ENST00000494486 TANGO6Q9C0B7 1094 aa13.51□□□□□ -0.25
TRIM59-206ENST00000494486 TRPV6Q9H1D0 765 aa13.51□□□□□ -0.25
TRIM59-206ENST00000494486 ZHX1Q9UKY1 873 aaPredicted RBP13.51□□□□□ -0.25
TRIM59-206ENST00000494486 PALD1Q9ULE6 856 aa13.51□□□□□ -0.25
TRIM59-206ENST00000494486 SOWAHBA6NEL2 793 aa13.5□□□□□ -0.25
TRIM59-206ENST00000494486 B4GALT4O60513 344 aa13.5□□□□□ -0.25
TRIM59-206ENST00000494486 VAMP4O75379 141 aa13.5□□□□□ -0.25
TRIM59-206ENST00000494486 RFC2P35250 354 aa13.5□□□□□ -0.25
TRIM59-206ENST00000494486 RFX5P48382 616 aaPredicted RBP13.5□□□□□ -0.25
TRIM59-206ENST00000494486 ERVK-21P61565 698 aa13.5□□□□□ -0.25
TRIM59-206ENST00000494486 MAPKAPK5Q8IW41 473 aa13.5□□□□□ -0.25
TRIM59-206ENST00000494486 TGS1Q96RS0 853 aaKnown RBP13.5□□□□□ -0.25
TRIM59-206ENST00000494486 FSD1Q9BTV5 496 aa13.5□□□□□ -0.25
TRIM59-206ENST00000494486 CABP5Q9NP86 173 aa13.5□□□□□ -0.25
TRIM59-206ENST00000494486 CTNNA3Q9UI47 895 aa13.5□□□□□ -0.25
TRIM59-206ENST00000494486 FLT1P17948 1338 aa13.49□□□□□ -0.25
TRIM59-206ENST00000494486 CACNA1GO43497 2377 aa13.49□□□□□ -0.25
TRIM59-206ENST00000494486 BRWD1Q9NSI6 2320 aa13.49□□□□□ -0.25
TRIM59-206ENST00000494486 CIAO1O76071 339 aa13.49□□□□□ -0.25
TRIM59-206ENST00000494486 ACVR2BQ13705 512 aa13.49□□□□□ -0.25
TRIM59-206ENST00000494486 NBPF20Q3BBV1 942 aa13.49□□□□□ -0.25
TRIM59-206ENST00000494486 MAMDC4Q6UXC1 1216 aa13.49□□□□□ -0.25
TRIM59-206ENST00000494486 PABPC5Q96DU9 382 aaKnown RBP13.49□□□□□ -0.25
TRIM59-206ENST00000494486 CNTNAP3BQ96NU0 1288 aa13.49□□□□□ -0.25
TRIM59-206ENST00000494486 CNTNAP3Q9BZ76 1288 aa13.49□□□□□ -0.25
TRIM59-206ENST00000494486 RAI14Q9P0K7 980 aa13.49□□□□□ -0.25
TRIM59-206ENST00000494486 H0Y858 1186 aa13.48□□□□□ -0.25
TRIM59-206ENST00000494486 CTAGE5O15320 804 aa13.48□□□□□ -0.25
TRIM59-206ENST00000494486 BAIAP3O94812 1187 aa13.48□□□□□ -0.25
TRIM59-206ENST00000494486 SUPT20HL2P0C7V6 817 aa13.48□□□□□ -0.25
TRIM59-206ENST00000494486 AVPR2P30518 371 aa13.48□□□□□ -0.25
TRIM59-206ENST00000494486 ADORA1P30542 326 aa13.48□□□□□ -0.25
TRIM59-206ENST00000494486 ABCB5Q2M3G0 1257 aa13.48□□□□□ -0.25
TRIM59-206ENST00000494486 CERKLQ49MI3 558 aaPredicted RBP13.48□□□□□ -0.25
TRIM59-206ENST00000494486 CXCL17Q6UXB2 119 aa13.48□□□□□ -0.25
TRIM59-206ENST00000494486 RIOX2Q8IUF8 465 aa13.48□□□□□ -0.25
TRIM59-206ENST00000494486 ZBED2Q9BTP6 218 aa13.48□□□□□ -0.25
TRIM59-206ENST00000494486 TLR9Q9NR96 1032 aa13.48□□□□□ -0.25
TRIM59-206ENST00000494486 GRIN2DO15399 1336 aa13.47□□□□□ -0.25
TRIM59-206ENST00000494486 A0A1B0GUL7 405 aa13.47□□□□□ -0.25
TRIM59-206ENST00000494486 LCHNA4D1U4 455 aa13.47□□□□□ -0.25
TRIM59-206ENST00000494486 COPB2P35606 906 aa13.47□□□□□ -0.25
TRIM59-206ENST00000494486 NBL1P41271 181 aa13.47□□□□□ -0.25
TRIM59-206ENST00000494486 PPP4CP60510 307 aa13.47□□□□□ -0.25
TRIM59-206ENST00000494486 TMEM132BQ14DG7 1078 aa13.47□□□□□ -0.25
TRIM59-206ENST00000494486 SMAD2Q15796 467 aaKnown RBP13.47□□□□□ -0.25
TRIM59-206ENST00000494486 PTPROQ16827 1216 aa13.47□□□□□ -0.25
TRIM59-206ENST00000494486 CCDC144BQ3MJ40 725 aa13.47□□□□□ -0.25
TRIM59-206ENST00000494486 DGLUCYQ7Z3D6 616 aa13.47□□□□□ -0.25
TRIM59-206ENST00000494486 ATG4CQ96DT6 458 aa13.47□□□□□ -0.25
TRIM59-206ENST00000494486 MRPL38Q96DV4 380 aaKnown RBP13.47□□□□□ -0.25
TRIM59-206ENST00000494486 ABHD16BQ9H3Z7 469 aa13.47□□□□□ -0.25
TRIM59-206ENST00000494486 MTUS1Q9ULD2 1270 aa13.47□□□□□ -0.25
TRIM59-206ENST00000494486 SIPA1L1O43166 1804 aa13.46□□□□□ -0.25
TRIM59-206ENST00000494486 TNKSO95271 1327 aa13.46□□□□□ -0.25
TRIM59-206ENST00000494486 ADCY6O43306 1168 aa13.46□□□□□ -0.25
TRIM59-206ENST00000494486 ZEB2O60315 1214 aa13.46□□□□□ -0.25
TRIM59-206ENST00000494486 FLOT1O75955 427 aa13.46□□□□□ -0.25
TRIM59-206ENST00000494486 KCNJ6P48051 423 aa13.46□□□□□ -0.25
TRIM59-206ENST00000494486 ZXDAP98168 799 aa13.46□□□□□ -0.25
TRIM59-206ENST00000494486 COL19A1Q14993 1142 aa13.46□□□□□ -0.25
TRIM59-206ENST00000494486 TIGD5Q53EQ6 642 aa13.46□□□□□ -0.25
TRIM59-206ENST00000494486 ZNF467Q7Z7K2 595 aaPredicted RBP13.46□□□□□ -0.25
TRIM59-206ENST00000494486 ADSSL1Q8N142 457 aa13.46□□□□□ -0.25
TRIM59-206ENST00000494486 FTOQ9C0B1 505 aaKnown RBP eCLIP13.46□□□□□ -0.25
TRIM59-206ENST00000494486 AATFQ9NY61 560 aaKnown RBP eCLIP13.46□□□□□ -0.25
TRIM59-206ENST00000494486 SAP30BPQ9UHR5 308 aaKnown RBP13.46□□□□□ -0.25
TRIM59-206ENST00000494486 TECTAO75443 2155 aa13.46□□□□□ -0.25
TRIM59-206ENST00000494486 IL15P40933 162 aaPredicted RBP13.45□□□□□ -0.26
TRIM59-206ENST00000494486 VCPP55072 806 aaKnown RBP13.45□□□□□ -0.26
TRIM59-206ENST00000494486 BEX3Q00994 111 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms