RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 UBXN4Q92575 508 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 SRRTQ9BXP5 876 aaKnown RBP10.48□□□□□ -0.73
MINDY4-203ENST00000494187 YY1AP1Q9H869 796 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 LRWD1Q9UFC0 647 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 POLR3GO15318 223 aaPredicted RBP10.48□□□□□ -0.73
MINDY4-203ENST00000494187 RNASE9P60153 205 aaKnown RBP10.48□□□□□ -0.73
MINDY4-203ENST00000494187 DDR1Q08345 913 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 TROAPQ12815 778 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 NONOQ15233 471 aaKnown RBP eCLIP10.48□□□□□ -0.73
MINDY4-203ENST00000494187 ATL3Q6DD88 541 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 COL23A1Q86Y22 540 aaPredicted RBP10.48□□□□□ -0.73
MINDY4-203ENST00000494187 NLGN1Q8N2Q7 840 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 CAPZA3Q96KX2 299 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 CCDC94Q9BW85 323 aaPredicted RBP10.48□□□□□ -0.73
MINDY4-203ENST00000494187 PDGFDQ9GZP0 370 aaPredicted RBP10.48□□□□□ -0.73
MINDY4-203ENST00000494187 EPC1Q9H2F5 836 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 SYNRGQ9UMZ2 1314 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 JCADQ9P266 1359 aa10.48□□□□□ -0.73
MINDY4-203ENST00000494187 A0A1W2PQ27 194 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 A0A1W2PQ64 194 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 A0A1W2PQD8 194 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 TEX33O43247 280 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 PLCG2P16885 1265 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 FMR1Q06787 632 aaKnown RBP eCLIP10.47□□□□□ -0.73
MINDY4-203ENST00000494187 CERKLQ49MI3 558 aaPredicted RBP10.47□□□□□ -0.73
MINDY4-203ENST00000494187 CCDC40Q4G0X9 1142 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 FOXP4Q8IVH2 680 aaPredicted RBP10.47□□□□□ -0.73
MINDY4-203ENST00000494187 NELFBQ8WX92 580 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 NEMFO60524 1076 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 SEPT2Q15019 361 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 IQCB1Q15051 598 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 PRR16Q569H4 304 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 C12orf60Q5U649 245 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 WWC2Q6AWC2 1192 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 NCAPH2Q6IBW4 605 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 CABP7Q86V35 215 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 RDH13Q8NBN7 331 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 CSRNP1Q96S65 589 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 BAG1Q99933 345 aaPredicted RBP10.47□□□□□ -0.73
MINDY4-203ENST00000494187 SLF1Q9BQI6 1058 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.47□□□□□ -0.73
MINDY4-203ENST00000494187 IRX2Q9BZI1 471 aaPredicted RBP10.47□□□□□ -0.73
MINDY4-203ENST00000494187 USP17L10C9JJH3 530 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 BBOX1O75936 387 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 GNA11P29992 359 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 HS1BP3Q53T59 392 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 ZNF771Q7L3S4 317 aaPredicted RBP10.47□□□□□ -0.73
MINDY4-203ENST00000494187 CACNA2D4Q7Z3S7 1137 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 ZFPM1Q8IX07 1006 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 ANKRD13CQ8N6S4 541 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 ENGASEQ8NFI3 743 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 BRIP1Q9BX63 1249 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 TMEM60Q9H2L4 133 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 FOXP1Q9H334 677 aaPredicted RBP10.47□□□□□ -0.73
MINDY4-203ENST00000494187 FAM207AQ9NSI2 230 aaPredicted RBP10.47□□□□□ -0.73
MINDY4-203ENST00000494187 DAGLAQ9Y4D2 1042 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 PCDHA1Q9Y5I3 950 aa10.47□□□□□ -0.73
MINDY4-203ENST00000494187 GSDMDP57764 484 aa10.46□□□□□ -0.73
MINDY4-203ENST00000494187 ELF2Q15723 593 aa10.46□□□□□ -0.73
MINDY4-203ENST00000494187 GDAP1L1Q96MZ0 367 aa10.46□□□□□ -0.73
MINDY4-203ENST00000494187 ZNF215Q9UL58 517 aaPredicted RBP10.46□□□□□ -0.73
MINDY4-203ENST00000494187 ERICH4A6NGS2 130 aa10.46□□□□□ -0.73
MINDY4-203ENST00000494187 ZNF500O60304 480 aaPredicted RBP10.46□□□□□ -0.73
MINDY4-203ENST00000494187 PTPREP23469 700 aa10.46□□□□□ -0.73
MINDY4-203ENST00000494187 MTF1Q14872 753 aa10.46□□□□□ -0.73
MINDY4-203ENST00000494187 ALX1Q15699 326 aa10.46□□□□□ -0.73
MINDY4-203ENST00000494187 CALCRLQ16602 461 aa10.46□□□□□ -0.73
MINDY4-203ENST00000494187 KRT79Q5XKE5 535 aa10.46□□□□□ -0.73
MINDY4-203ENST00000494187 CSGALNACT2Q8N6G5 542 aa10.46□□□□□ -0.73
MINDY4-203ENST00000494187 FUCA2Q9BTY2 467 aa10.46□□□□□ -0.73
MINDY4-203ENST00000494187 ZNHIT6Q9NWK9 470 aaKnown RBP10.46□□□□□ -0.73
MINDY4-203ENST00000494187 STK32BQ9NY57 414 aa10.46□□□□□ -0.73
MINDY4-203ENST00000494187 CACNA1FO60840 1977 aa10.46□□□□□ -0.74
MINDY4-203ENST00000494187 SPDYE3A6NKU9 549 aa10.46□□□□□ -0.74
MINDY4-203ENST00000494187 SFI1A8K8P3 1242 aa10.46□□□□□ -0.74
MINDY4-203ENST00000494187 CLGNO14967 610 aa10.46□□□□□ -0.74
MINDY4-203ENST00000494187 TDP2O95551 362 aa10.46□□□□□ -0.74
MINDY4-203ENST00000494187 GH2P01242 217 aa10.46□□□□□ -0.74
MINDY4-203ENST00000494187 RXRBP28702 533 aa10.46□□□□□ -0.74
MINDY4-203ENST00000494187 ZNF569Q5MCW4 686 aa10.46□□□□□ -0.74
MINDY4-203ENST00000494187 KANK3Q6NY19 840 aa10.46□□□□□ -0.74
MINDY4-203ENST00000494187 ALDH8A1Q9H2A2 487 aaPredicted RBP10.46□□□□□ -0.74
MINDY4-203ENST00000494187 NLRC4Q9NPP4 1024 aa10.46□□□□□ -0.74
MINDY4-203ENST00000494187 PNPLA7Q6ZV29 1317 aa10.45□□□□□ -0.74
MINDY4-203ENST00000494187 PSMA7O14818 248 aa10.45□□□□□ -0.74
MINDY4-203ENST00000494187 PRPF3O43395 683 aaKnown RBP10.45□□□□□ -0.74
MINDY4-203ENST00000494187 CAVIN2O95810 425 aa10.45□□□□□ -0.74
MINDY4-203ENST00000494187 CASQ1P31415 396 aa10.45□□□□□ -0.74
MINDY4-203ENST00000494187 KRT9P35527 623 aa10.45□□□□□ -0.74
MINDY4-203ENST00000494187 USP8P40818 1118 aa10.45□□□□□ -0.74
MINDY4-203ENST00000494187 ADCY7P51828 1080 aa10.45□□□□□ -0.74
MINDY4-203ENST00000494187 ICA1Q05084 483 aa10.45□□□□□ -0.74
MINDY4-203ENST00000494187 PAGE5Q96GU1 130 aa10.45□□□□□ -0.74
MINDY4-203ENST00000494187 MACROD2A1Z1Q3 448 aa10.45□□□□□ -0.74
MINDY4-203ENST00000494187 TRAF5O00463 557 aa10.45□□□□□ -0.74
MINDY4-203ENST00000494187 RASA1P20936 1047 aa10.45□□□□□ -0.74
MINDY4-203ENST00000494187 ALDH1B1P30837 517 aa10.45□□□□□ -0.74
MINDY4-203ENST00000494187 MRPS25P82663 173 aaKnown RBP10.45□□□□□ -0.74
MINDY4-203ENST00000494187 MCM6Q14566 821 aa10.45□□□□□ -0.74
MINDY4-203ENST00000494187 EZH2Q15910 746 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms