RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 ANO1Q5XXA6 986 aa28.11■■■□□ 2.09
RHBDD3-206ENST00000493894 SLFN13Q68D06 897 aa28.11■■■□□ 2.09
RHBDD3-206ENST00000493894 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.11■■■□□ 2.09
RHBDD3-206ENST00000493894 TSPY2A6NKD2 308 aa28.1■■■□□ 2.09
RHBDD3-206ENST00000493894 ATP2A1O14983 1001 aa28.1■■■□□ 2.09
RHBDD3-206ENST00000493894 BMP3P12645 472 aa28.1■■■□□ 2.09
RHBDD3-206ENST00000493894 MAGEA10P43363 369 aaPredicted RBP28.1■■■□□ 2.09
RHBDD3-206ENST00000493894 CTDSPL2Q05D32 466 aa28.1■■■□□ 2.09
RHBDD3-206ENST00000493894 GJC2Q5T442 439 aaPredicted RBP28.1■■■□□ 2.09
RHBDD3-206ENST00000493894 CPXCR1Q8N123 301 aa28.1■■■□□ 2.09
RHBDD3-206ENST00000493894 TINF2Q9BSI4 451 aa28.1■■■□□ 2.09
RHBDD3-206ENST00000493894 LNPKQ9C0E8 428 aa28.1■■■□□ 2.09
RHBDD3-206ENST00000493894 ISY1Q9ULR0 285 aaKnown RBP28.1■■■□□ 2.09
RHBDD3-206ENST00000493894 VPS53Q5VIR6 699 aa28.09■■■□□ 2.09
RHBDD3-206ENST00000493894 TICAM2Q86XR7 235 aa28.09■■■□□ 2.09
RHBDD3-206ENST00000493894 RWDD1Q9H446 243 aaPredicted RBP28.09■■■□□ 2.09
RHBDD3-206ENST00000493894 SLC38A10Q9HBR0 1119 aa28.09■■■□□ 2.09
RHBDD3-206ENST00000493894 MYCNP04198 464 aaPredicted RBP28.08■■■□□ 2.09
RHBDD3-206ENST00000493894 SLC4A3P48751 1232 aa28.08■■■□□ 2.09
RHBDD3-206ENST00000493894 ATN1P54259 1190 aaPredicted RBP28.08■■■□□ 2.09
RHBDD3-206ENST00000493894 DDX11Q96FC9 970 aa28.08■■■□□ 2.09
RHBDD3-206ENST00000493894 RAVER2Q9HCJ3 691 aaKnown RBP28.08■■■□□ 2.09
RHBDD3-206ENST00000493894 ANAPC4Q9UJX5 808 aa28.08■■■□□ 2.09
RHBDD3-206ENST00000493894 STX8Q9UNK0 236 aa28.08■■■□□ 2.09
RHBDD3-206ENST00000493894 RIPK3Q9Y572 518 aa28.08■■■□□ 2.09
RHBDD3-206ENST00000493894 OAZ1P54368 228 aa28.07■■■□□ 2.08
RHBDD3-206ENST00000493894 SMC5Q8IY18 1101 aa28.07■■■□□ 2.08
RHBDD3-206ENST00000493894 GMCL1Q96IK5 515 aa28.07■■■□□ 2.08
RHBDD3-206ENST00000493894 FAM227BQ96M60 508 aa28.07■■■□□ 2.08
RHBDD3-206ENST00000493894 CNPY2Q9Y2B0 182 aa28.07■■■□□ 2.08
RHBDD3-206ENST00000493894 A0A0D9SFI3 127 aa28.06■■■□□ 2.08
RHBDD3-206ENST00000493894 TRIM6-TRIM34B2RNG4 842 aa28.06■■■□□ 2.08
RHBDD3-206ENST00000493894 RARBP10826 455 aa28.06■■■□□ 2.08
RHBDD3-206ENST00000493894 SLC1A4P43007 532 aa28.06■■■□□ 2.08
RHBDD3-206ENST00000493894 STAT2P52630 851 aa28.06■■■□□ 2.08
RHBDD3-206ENST00000493894 MCMDC2Q4G0Z9 681 aa28.06■■■□□ 2.08
RHBDD3-206ENST00000493894 MSL3Q8N5Y2 521 aaKnown RBP28.06■■■□□ 2.08
RHBDD3-206ENST00000493894 FBXO40Q9UH90 709 aa28.06■■■□□ 2.08
RHBDD3-206ENST00000493894 TMEM232C9JQI7 657 aa28.05■■■□□ 2.08
RHBDD3-206ENST00000493894 FDX1P10109 184 aa28.05■■■□□ 2.08
RHBDD3-206ENST00000493894 IKQ13123 557 aaPredicted RBP28.05■■■□□ 2.08
RHBDD3-206ENST00000493894 ALX1Q15699 326 aa28.05■■■□□ 2.08
RHBDD3-206ENST00000493894 FAM160B2Q86V87 743 aa28.05■■■□□ 2.08
RHBDD3-206ENST00000493894 UBE2OQ9C0C9 1292 aaKnown RBP28.05■■■□□ 2.08
RHBDD3-206ENST00000493894 XPNPEP3Q9NQH7 507 aa28.05■■■□□ 2.08
RHBDD3-206ENST00000493894 RANBP6O60518 1105 aaKnown RBP28.04■■■□□ 2.08
RHBDD3-206ENST00000493894 RTP1P59025 263 aa28.04■■■□□ 2.08
RHBDD3-206ENST00000493894 LRRC41Q15345 812 aa28.04■■■□□ 2.08
RHBDD3-206ENST00000493894 B4GALNT3Q6L9W6 998 aa28.04■■■□□ 2.08
RHBDD3-206ENST00000493894 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.04■■■□□ 2.08
RHBDD3-206ENST00000493894 CHST13Q8NET6 341 aa28.04■■■□□ 2.08
RHBDD3-206ENST00000493894 ZMYM6O95789 1325 aa28.03■■■□□ 2.08
RHBDD3-206ENST00000493894 SYNGAP1Q96PV0 1343 aa28.03■■■□□ 2.08
RHBDD3-206ENST00000493894 DNAJC25-GNG10A0A024R161 153 aa28.03■■■□□ 2.08
RHBDD3-206ENST00000493894 ORC4O43929 436 aa28.03■■■□□ 2.08
RHBDD3-206ENST00000493894 AKR1A1P14550 325 aa28.03■■■□□ 2.08
RHBDD3-206ENST00000493894 NMIQ13287 307 aaPredicted RBP28.03■■■□□ 2.08
RHBDD3-206ENST00000493894 TDHQ8IZJ6 230 aa28.03■■■□□ 2.08
RHBDD3-206ENST00000493894 ANKRD35Q8N283 1001 aa28.03■■■□□ 2.08
RHBDD3-206ENST00000493894 CHURC1Q8WUH1 139 aa28.03■■■□□ 2.08
RHBDD3-206ENST00000493894 RILPL2Q969X0 211 aa28.03■■■□□ 2.08
RHBDD3-206ENST00000493894 INCENPQ9NQS7 918 aa28.03■■■□□ 2.08
RHBDD3-206ENST00000493894 SZT2Q5T011 3432 aa28.02■■■□□ 2.08
RHBDD3-206ENST00000493894 DNAH12Q6ZR08 3092 aa28.02■■■□□ 2.08
RHBDD3-206ENST00000493894 SOX1O00570 391 aaPredicted RBP28.02■■■□□ 2.08
RHBDD3-206ENST00000493894 NMT2O60551 498 aa28.02■■■□□ 2.08
RHBDD3-206ENST00000493894 ZNF865P0CJ78 1059 aaPredicted RBP28.02■■■□□ 2.08
RHBDD3-206ENST00000493894 TAL1P17542 331 aaPredicted RBP28.02■■■□□ 2.08
RHBDD3-206ENST00000493894 MCCP23508 829 aa28.02■■■□□ 2.08
RHBDD3-206ENST00000493894 CHD1LQ86WJ1 897 aa28.02■■■□□ 2.08
RHBDD3-206ENST00000493894 IL17RBQ9NRM6 502 aa28.02■■■□□ 2.08
RHBDD3-206ENST00000493894 TOMM22Q9NS69 142 aa28.02■■■□□ 2.08
RHBDD3-206ENST00000493894 PRKAG2Q9UGJ0 569 aa28.02■■■□□ 2.08
RHBDD3-206ENST00000493894 ATP11BQ9Y2G3 1177 aa28.02■■■□□ 2.08
RHBDD3-206ENST00000493894 CCDC171Q6TFL3 1326 aa28.01■■■□□ 2.07
RHBDD3-206ENST00000493894 FGAP02671 866 aa28.01■■■□□ 2.07
RHBDD3-206ENST00000493894 MDM2Q00987 491 aaPredicted RBP28.01■■■□□ 2.07
RHBDD3-206ENST00000493894 SLC39A5Q6ZMH5 540 aa28.01■■■□□ 2.07
RHBDD3-206ENST00000493894 ZNF467Q7Z7K2 595 aaPredicted RBP28.01■■■□□ 2.07
RHBDD3-206ENST00000493894 RNF180Q86T96 592 aa28.01■■■□□ 2.07
RHBDD3-206ENST00000493894 STAG1Q8WVM7 1258 aa28.01■■■□□ 2.07
RHBDD3-206ENST00000493894 HOMER2Q9NSB8 354 aa28.01■■■□□ 2.07
RHBDD3-206ENST00000493894 FGRP09769 529 aa28■■■□□ 2.07
RHBDD3-206ENST00000493894 HSPD1P10809 573 aaKnown RBP28■■■□□ 2.07
RHBDD3-206ENST00000493894 ADCYAP1R1P41586 468 aa28■■■□□ 2.07
RHBDD3-206ENST00000493894 MAMDC4Q6UXC1 1216 aa28■■■□□ 2.07
RHBDD3-206ENST00000493894 ZNF589Q86UQ0 364 aaPredicted RBP28■■■□□ 2.07
RHBDD3-206ENST00000493894 CHMP4CQ96CF2 233 aa28■■■□□ 2.07
RHBDD3-206ENST00000493894 LRCH3Q96II8 777 aa28■■■□□ 2.07
RHBDD3-206ENST00000493894 LBHD1Q9BQE6 289 aaPredicted RBP28■■■□□ 2.07
RHBDD3-206ENST00000493894 TACC3Q9Y6A5 838 aa28■■■□□ 2.07
RHBDD3-206ENST00000493894 LAMA3Q16787 3333 aa27.99■■■□□ 2.07
RHBDD3-206ENST00000493894 PLA2G6O60733 806 aa27.99■■■□□ 2.07
RHBDD3-206ENST00000493894 NUCB1Q02818 461 aa27.99■■■□□ 2.07
RHBDD3-206ENST00000493894 SNX17Q15036 470 aa27.99■■■□□ 2.07
RHBDD3-206ENST00000493894 KCTD1Q719H9 257 aa27.99■■■□□ 2.07
RHBDD3-206ENST00000493894 EXOC6Q8TAG9 804 aa27.99■■■□□ 2.07
RHBDD3-206ENST00000493894 ACAD9Q9H845 621 aa27.99■■■□□ 2.07
RHBDD3-206ENST00000493894 ZHX1Q9UKY1 873 aaPredicted RBP27.99■■■□□ 2.07
RHBDD3-206ENST00000493894 PGK1P00558 417 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms