RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 TBC1D10CQ8IV04 446 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 DCAF4Q8WV16 495 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 USP6NLQ92738 828 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 KIFC2Q96AC6 838 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 TMEM47Q9BQJ4 181 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 NBPF3Q9H094 633 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 RLFQ13129 1914 aa8.22□□□□□ -1.09
TOP3A-207ENST00000493648 PLA2G6O60733 806 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 KDM4AO75164 1064 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 GJB1P08034 283 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 FCER1AP12319 257 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 ZKSCAN1P17029 563 aaPredicted RBP8.21□□□□□ -1.1
TOP3A-207ENST00000493648 EN2P19622 333 aaPredicted RBP8.21□□□□□ -1.1
TOP3A-207ENST00000493648 SLC4A3P48751 1232 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 STAT2P52630 851 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 PTH1RQ03431 593 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 GRB14Q14449 540 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 MFSD14CQ5VZR4 134 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 RIOX2Q8IUF8 465 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 ABRAQ8N0Z2 381 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 MAP4K1Q92918 833 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 ZSCAN10Q96SZ4 725 aaPredicted RBP8.21□□□□□ -1.1
TOP3A-207ENST00000493648 APBA2Q99767 749 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 ZKSCAN3Q9BRR0 538 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 TEX13BQ9BXU2 312 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 UNC93B1Q9H1C4 597 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 IL25Q9H293 177 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 HMX1Q9NP08 348 aaPredicted RBP8.21□□□□□ -1.1
TOP3A-207ENST00000493648 PPP4R2Q9NY27 417 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 ZSWIM5Q9P217 1185 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 MTMR7Q9Y216 660 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 NEDD4P46934 1319 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 RPTORQ8N122 1335 aa8.21□□□□□ -1.1
TOP3A-207ENST00000493648 PLXNB2O15031 1838 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 PARP14Q460N5 1801 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 B4E1Z4 1266 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 ATP2A1O14983 1001 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 SGPL1O95470 568 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 TFRCP02786 760 aaKnown RBP8.2□□□□□ -1.1
TOP3A-207ENST00000493648 HOXC6P09630 235 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 ADORA2AP29274 412 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 GJA8P48165 433 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 OAZ1P54368 228 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 KCTD2Q14681 263 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 CCDC96Q2M329 555 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 SNRNP48Q6IEG0 339 aaKnown RBP8.2□□□□□ -1.1
TOP3A-207ENST00000493648 KCTD1Q719H9 257 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 CPXCR1Q8N123 301 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 REPS2Q8NFH8 660 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 TRIB2Q92519 343 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 ANKS1AQ92625 1134 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 CHMP4CQ96CF2 233 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 MMP19Q99542 508 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 ESYT1Q9BSJ8 1104 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 UBAC1Q9BSL1 405 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 KAT14Q9H8E8 782 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 SLC38A10Q9HBR0 1119 aa8.2□□□□□ -1.1
TOP3A-207ENST00000493648 RAVER2Q9HCJ3 691 aaKnown RBP8.2□□□□□ -1.1
TOP3A-207ENST00000493648 ZNF214Q9UL59 606 aaPredicted RBP8.2□□□□□ -1.1
TOP3A-207ENST00000493648 ZNFX1Q9P2E3 1918 aaKnown RBP8.2□□□□□ -1.1
TOP3A-207ENST00000493648 COL11A1P12107 1806 aaPredicted RBP8.19□□□□□ -1.1
TOP3A-207ENST00000493648 ERICH2A1L162 156 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 CYP21A2P08686 494 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 CCL14Q16627 93 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 OLFML2BQ68BL8 750 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 RALYLQ86SE5 291 aaKnown RBP8.19□□□□□ -1.1
TOP3A-207ENST00000493648 SKAP1Q86WV1 359 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 CHST13Q8NET6 341 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 NCOA7Q8NI08 942 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 NPLOC4Q8TAT6 608 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 U2AF1L4Q8WU68 220 aaKnown RBP8.19□□□□□ -1.1
TOP3A-207ENST00000493648 DDX11Q96FC9 970 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 DEFB118Q96PH6 123 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.19□□□□□ -1.1
TOP3A-207ENST00000493648 GPCPD1Q9NPB8 672 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 FBXO40Q9UH90 709 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 PRR12Q9ULL5 1215 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 RBM8AQ9Y5S9 174 aaKnown RBP8.19□□□□□ -1.1
TOP3A-207ENST00000493648 A0A0G2JMZ2 1700 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 RBBP6Q7Z6E9 1792 aaKnown RBP8.19□□□□□ -1.1
TOP3A-207ENST00000493648 KIAA0100Q14667 2235 aaKnown RBP8.19□□□□□ -1.1
TOP3A-207ENST00000493648 LAMA4Q16363 1823 aa8.19□□□□□ -1.1
TOP3A-207ENST00000493648 E7EWF7 191 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 COBLO75128 1261 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 CDC45O75419 566 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 PDHBP11177 359 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 PRKAR2AP13861 404 aaKnown RBP8.18□□□□□ -1.1
TOP3A-207ENST00000493648 SLC16A2P36021 539 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 CACNB2Q08289 660 aaPredicted RBP8.18□□□□□ -1.1
TOP3A-207ENST00000493648 TRIM32Q13049 653 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 SART3Q15020 963 aaKnown RBP8.18□□□□□ -1.1
TOP3A-207ENST00000493648 TKFCQ3LXA3 575 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 GPATCH4Q5T3I0 446 aaKnown RBP8.18□□□□□ -1.1
TOP3A-207ENST00000493648 IFIT1BQ5T764 474 aaKnown RBP8.18□□□□□ -1.1
TOP3A-207ENST00000493648 MAP3K21Q5TCX8 1036 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 SYDE2Q5VT97 1194 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 TTBK2Q6IQ55 1244 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 BTNL9Q6UXG8 535 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 ANKRD35Q8N283 1001 aa8.18□□□□□ -1.1
TOP3A-207ENST00000493648 PNMA1Q8ND90 353 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms