RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 FANCCQ00597 558 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 GUCY1A3Q02108 690 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 CBX3Q13185 183 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 ME3Q16798 604 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 TWISTNBQ3B726 338 aaPredicted RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 NUGGCQ68CJ6 796 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 UHMK1Q8TAS1 419 aaKnown RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 CXorf38Q8TB03 319 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 ACSBG1Q96GR2 724 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 FGD4Q96M96 766 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 ZMAT2Q96NC0 199 aaKnown RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 BRD8Q9H0E9 1235 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 U3KPZ7 1027 aaPredicted RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 USP42Q9H9J4 1324 aaKnown RBP7.63□□□□□ -1.19
VPS13B-205ENST00000493587 ZFXP17010 805 aaPredicted RBP7.63□□□□□ -1.19
VPS13B-205ENST00000493587 ALDH3A1P30838 453 aa7.63□□□□□ -1.19
VPS13B-205ENST00000493587 HPDP32754 393 aaPredicted RBP7.63□□□□□ -1.19
VPS13B-205ENST00000493587 DRP2Q13474 957 aa7.63□□□□□ -1.19
VPS13B-205ENST00000493587 TBC1D1Q86TI0 1168 aaPredicted RBP7.63□□□□□ -1.19
VPS13B-205ENST00000493587 PROSER2Q86WR7 435 aaPredicted RBP7.63□□□□□ -1.19
VPS13B-205ENST00000493587 DHX40Q8IX18 779 aaKnown RBP7.63□□□□□ -1.19
VPS13B-205ENST00000493587 IQCF2Q8IXL9 164 aa7.63□□□□□ -1.19
VPS13B-205ENST00000493587 USHBP1Q8N6Y0 703 aa7.63□□□□□ -1.19
VPS13B-205ENST00000493587 ANKRD44Q8N8A2 993 aa7.63□□□□□ -1.19
VPS13B-205ENST00000493587 DPPA5A6NC42 116 aa7.63□□□□□ -1.19
VPS13B-205ENST00000493587 GCP02774 474 aa7.63□□□□□ -1.19
VPS13B-205ENST00000493587 AARSP49588 968 aaKnown RBP eCLIP7.63□□□□□ -1.19
VPS13B-205ENST00000493587 DMPKQ09013 629 aa7.63□□□□□ -1.19
VPS13B-205ENST00000493587 BLMHQ13867 455 aa7.63□□□□□ -1.19
VPS13B-205ENST00000493587 CEP85Q6P2H3 762 aa7.63□□□□□ -1.19
VPS13B-205ENST00000493587 WDR75Q8IWA0 830 aaKnown RBP7.63□□□□□ -1.19
VPS13B-205ENST00000493587 SH2D3CQ8N5H7 860 aa7.63□□□□□ -1.19
VPS13B-205ENST00000493587 NOA1Q8NC60 698 aaKnown RBP7.63□□□□□ -1.19
VPS13B-205ENST00000493587 CCT8L2Q96SF2 557 aa7.63□□□□□ -1.19
VPS13B-205ENST00000493587 UBA5Q9GZZ9 404 aa7.63□□□□□ -1.19
VPS13B-205ENST00000493587 COL4A1P02462 1669 aa7.63□□□□□ -1.19
VPS13B-205ENST00000493587 FUT4P22083 530 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 ABL2P42684 1182 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 PSMC4P43686 418 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 TOGARAM2Q6ZUX3 1019 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 LCA5Q86VQ0 697 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 NLRP14Q86W24 1093 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 CAPZA3Q96KX2 299 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 SELENOOQ9BVL4 669 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 CETN3O15182 167 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 NDUFB5O43674 189 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 LSP1P33241 339 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 ME1P48163 572 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 POLA2Q14181 598 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 PDIA6Q15084 440 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 KIAA0753Q2KHM9 967 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 YTHDF3Q7Z739 585 aaKnown RBP7.62□□□□□ -1.19
VPS13B-205ENST00000493587 CCHCR1Q8TD31 782 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 C8orf76Q96K31 380 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 VCXQ9H320 206 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 HOXB7P09629 217 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 ADKP55263 362 aaKnown RBP7.62□□□□□ -1.19
VPS13B-205ENST00000493587 MTX1Q13505 466 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 TSR1Q2NL82 804 aaKnown RBP7.62□□□□□ -1.19
VPS13B-205ENST00000493587 ODF2Q5BJF6 829 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 RASIP1Q5U651 963 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 NCAPH2Q6IBW4 605 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 FCHSD1Q86WN1 690 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 SLF2Q8IX21 1173 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 CACNA2D3Q8IZS8 1091 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 CPLX3Q8WVH0 158 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 TAF4BQ92750 862 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 HVCN1Q96D96 273 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 ZNF570Q96NI8 536 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 EPN3Q9H201 632 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 FANCLQ9NW38 375 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 FAM184BQ9ULE4 1060 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 TMEM98Q9Y2Y6 226 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 GRIN2DO15399 1336 aa7.62□□□□□ -1.19
VPS13B-205ENST00000493587 ATXN2Q99700 1313 aaKnown RBP7.62□□□□□ -1.19
VPS13B-205ENST00000493587 ZNF335Q9H4Z2 1342 aaPredicted RBP7.62□□□□□ -1.19
VPS13B-205ENST00000493587 SPDYE5A6NIY4 337 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 TMCC1O94876 653 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 NBPF7P0C2Y1 421 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-205ENST00000493587 SCTRP47872 440 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 CDC37Q16543 378 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-205ENST00000493587 ATL3Q6DD88 541 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 CPLX4Q7Z7G2 160 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 LONP2Q86WA8 852 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 ARHGAP18Q8N392 663 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 FSIP1Q8NA03 581 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 NR1H4Q96RI1 486 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-205ENST00000493587 CDC5LQ99459 802 aaKnown RBP7.61□□□□□ -1.19
VPS13B-205ENST00000493587 NAPGQ99747 312 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-205ENST00000493587 VCX3BQ9H321 246 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 VCX3AQ9NNX9 186 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 MYH14Q7Z406 1995 aaKnown RBP7.61□□□□□ -1.19
VPS13B-205ENST00000493587 PFKFB2O60825 505 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 GFPT2O94808 682 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 NAT2P11245 290 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 TMED1Q13445 227 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 DIXDC1Q155Q3 683 aa7.61□□□□□ -1.19
VPS13B-205ENST00000493587 GIGYF2Q6Y7W6 1299 aaKnown RBP7.61□□□□□ -1.19
VPS13B-205ENST00000493587 G2E3Q7L622 706 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms