RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	ADCYAP1R1	P41586	468 aa		18.26	■□□□□ 0.51
MRPL55-231	ENST00000492170	SNX17	Q15036	470 aa		18.26	■□□□□ 0.51
MRPL55-231	ENST00000492170	RNF180	Q86T96	592 aa		18.26	■□□□□ 0.51
MRPL55-231	ENST00000492170	MKL1	Q969V6	931 aa		18.26	■□□□□ 0.51
MRPL55-231	ENST00000492170	KIFC2	Q96AC6	838 aa		18.26	■□□□□ 0.51
MRPL55-231	ENST00000492170	DDX11	Q96FC9	970 aa		18.26	■□□□□ 0.51
MRPL55-231	ENST00000492170	MTMR4	Q9NYA4	1195 aa		18.26	■□□□□ 0.51
MRPL55-231	ENST00000492170	ZBTB47	Q9UFB7	747 aa	Predicted RBP	18.26	■□□□□ 0.51
MRPL55-231	ENST00000492170	ATP2A1	O14983	1001 aa		18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	MX1	P20591	662 aa		18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	RRP1	P56182	461 aa	Known RBP	18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	TRIM60	Q495X7	471 aa		18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	ZMYM1	Q5SVZ6	1142 aa		18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	CPXCR1	Q8N123	301 aa		18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	LRRC47	Q8N1G4	583 aa	Known RBP	18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	MSL3	Q8N5Y2	521 aa	Known RBP	18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	GMCL1P1	Q8NEA9	526 aa		18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	NEDD1	Q8NHV4	660 aa		18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	FERMT2	Q96AC1	680 aa		18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	SEC62	Q99442	399 aa	Known RBP	18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	PRDM5	Q9NQX1	630 aa	Predicted RBP	18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	FEM1B	Q9UK73	627 aa		18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	MYH4	Q9Y623	1939 aa		18.25	■□□□□ 0.51
MRPL55-231	ENST00000492170	PLXNA1	Q9UIW2	1896 aa		18.24	■□□□□ 0.51
MRPL55-231	ENST00000492170	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.24	■□□□□ 0.51
MRPL55-231	ENST00000492170	TAL1	P17542	331 aa	Predicted RBP	18.24	■□□□□ 0.51
MRPL55-231	ENST00000492170	SLC4A3	P48751	1232 aa		18.24	■□□□□ 0.51
MRPL55-231	ENST00000492170	PPARA	Q07869	468 aa		18.24	■□□□□ 0.51
MRPL55-231	ENST00000492170		Q7L0L9	218 aa		18.24	■□□□□ 0.51
MRPL55-231	ENST00000492170	SLC38A10	Q9HBR0	1119 aa		18.24	■□□□□ 0.51
MRPL55-231	ENST00000492170	PHF24	Q9UPV7	400 aa		18.24	■□□□□ 0.51
MRPL55-231	ENST00000492170	RIPK3	Q9Y572	518 aa		18.24	■□□□□ 0.51
MRPL55-231	ENST00000492170	SYNGAP1	Q96PV0	1343 aa		18.23	■□□□□ 0.51
MRPL55-231	ENST00000492170	LAMA2	P24043	3122 aa	Known RBP	18.23	■□□□□ 0.51
MRPL55-231	ENST00000492170	PGK1	P00558	417 aa		18.23	■□□□□ 0.51
MRPL55-231	ENST00000492170	PPP4R3B	Q5MIZ7	849 aa		18.23	■□□□□ 0.51
MRPL55-231	ENST00000492170	C1orf53	Q5VUE5	145 aa		18.23	■□□□□ 0.51
MRPL55-231	ENST00000492170	SLFN13	Q68D06	897 aa		18.23	■□□□□ 0.51
MRPL55-231	ENST00000492170	SLC17A8	Q8NDX2	589 aa		18.23	■□□□□ 0.51
MRPL55-231	ENST00000492170	FBXO40	Q9UH90	709 aa		18.23	■□□□□ 0.51
MRPL55-231	ENST00000492170	ISY1	Q9ULR0	285 aa	Known RBP	18.23	■□□□□ 0.51
MRPL55-231	ENST00000492170	LTBP2	Q14767	1821 aa		18.23	■□□□□ 0.51
MRPL55-231	ENST00000492170	DNAJC25-GNG10	A0A024R161	153 aa		18.22	■□□□□ 0.51
MRPL55-231	ENST00000492170	BMP3	P12645	472 aa		18.22	■□□□□ 0.51
MRPL55-231	ENST00000492170	OAZ1	P54368	228 aa		18.22	■□□□□ 0.51
MRPL55-231	ENST00000492170	TFAP4	Q01664	338 aa		18.22	■□□□□ 0.51
MRPL55-231	ENST00000492170	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	18.22	■□□□□ 0.51
MRPL55-231	ENST00000492170	ZNF467	Q7Z7K2	595 aa	Predicted RBP	18.22	■□□□□ 0.51
MRPL55-231	ENST00000492170	RAVER2	Q9HCJ3	691 aa	Known RBP	18.22	■□□□□ 0.51
MRPL55-231	ENST00000492170	PDLIM7	Q9NR12	457 aa		18.22	■□□□□ 0.51
MRPL55-231	ENST00000492170	ZHX1	Q9UKY1	873 aa	Predicted RBP	18.22	■□□□□ 0.51
MRPL55-231	ENST00000492170	FDX1	P10109	184 aa		18.21	■□□□□ 0.51
MRPL55-231	ENST00000492170	MAMDC4	Q6UXC1	1216 aa		18.21	■□□□□ 0.51
MRPL55-231	ENST00000492170	ANKRD35	Q8N283	1001 aa		18.21	■□□□□ 0.51
MRPL55-231	ENST00000492170	CHST13	Q8NET6	341 aa		18.21	■□□□□ 0.51
MRPL55-231	ENST00000492170	LENG1	Q96BZ8	264 aa	Predicted RBP	18.21	■□□□□ 0.51
MRPL55-231	ENST00000492170	MTMR10	Q9NXD2	777 aa		18.21	■□□□□ 0.51
MRPL55-231	ENST00000492170	FAM184B	Q9ULE4	1060 aa		18.21	■□□□□ 0.51
MRPL55-231	ENST00000492170	STXBP5L	Q9Y2K9	1186 aa		18.21	■□□□□ 0.51
MRPL55-231	ENST00000492170	SMCHD1	A6NHR9	2005 aa		18.21	■□□□□ 0.51
MRPL55-231	ENST00000492170	SALL3	Q9BXA9	1300 aa		18.21	■□□□□ 0.51
MRPL55-231	ENST00000492170		A0A1W2PQ45	241 aa	Predicted RBP	18.2	■□□□□ 0.5
MRPL55-231	ENST00000492170		A0A1W2PQY0	241 aa		18.2	■□□□□ 0.5
MRPL55-231	ENST00000492170	SNAI1	O95863	264 aa	Predicted RBP	18.2	■□□□□ 0.5
MRPL55-231	ENST00000492170	STAT2	P52630	851 aa		18.2	■□□□□ 0.5
MRPL55-231	ENST00000492170	TLE2	Q04725	743 aa		18.2	■□□□□ 0.5
MRPL55-231	ENST00000492170	IK	Q13123	557 aa	Predicted RBP	18.2	■□□□□ 0.5
MRPL55-231	ENST00000492170	ANKRD45	Q5TZF3	282 aa		18.2	■□□□□ 0.5
MRPL55-231	ENST00000492170	FAM160B2	Q86V87	743 aa		18.2	■□□□□ 0.5
MRPL55-231	ENST00000492170	GMCL1	Q96IK5	515 aa		18.2	■□□□□ 0.5
MRPL55-231	ENST00000492170	TSEN34	Q9BSV6	310 aa	Known RBP	18.2	■□□□□ 0.5
MRPL55-231	ENST00000492170	TSPY2	A6NKD2	308 aa		18.19	■□□□□ 0.5
MRPL55-231	ENST00000492170	TMEM232	C9JQI7	657 aa		18.19	■□□□□ 0.5
MRPL55-231	ENST00000492170	ADAMTS4	O75173	837 aa		18.19	■□□□□ 0.5
MRPL55-231	ENST00000492170	SLC1A4	P43007	532 aa		18.19	■□□□□ 0.5
MRPL55-231	ENST00000492170	CCDC129	Q6ZRS4	1044 aa		18.19	■□□□□ 0.5
MRPL55-231	ENST00000492170	CHURC1	Q8WUH1	139 aa		18.19	■□□□□ 0.5
MRPL55-231	ENST00000492170	BAD	Q92934	168 aa		18.19	■□□□□ 0.5
MRPL55-231	ENST00000492170	EVI5L	Q96CN4	794 aa		18.19	■□□□□ 0.5
MRPL55-231	ENST00000492170	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.19	■□□□□ 0.5
MRPL55-231	ENST00000492170	STX8	Q9UNK0	236 aa		18.19	■□□□□ 0.5
MRPL55-231	ENST00000492170	TACC3	Q9Y6A5	838 aa		18.19	■□□□□ 0.5
MRPL55-231	ENST00000492170	SYNRG	Q9UMZ2	1314 aa		18.19	■□□□□ 0.5
MRPL55-231	ENST00000492170	TRIM43B	A6NCK2	446 aa		18.18	■□□□□ 0.5
MRPL55-231	ENST00000492170	PQBP1	O60828	265 aa	Known RBP	18.18	■□□□□ 0.5
MRPL55-231	ENST00000492170	CLTB	P09497	229 aa		18.18	■□□□□ 0.5
MRPL55-231	ENST00000492170	FAM109B	Q6ICB4	259 aa	Predicted RBP	18.18	■□□□□ 0.5
MRPL55-231	ENST00000492170	SH3RF1	Q7Z6J0	888 aa		18.18	■□□□□ 0.5
MRPL55-231	ENST00000492170	NUP133	Q8WUM0	1156 aa		18.18	■□□□□ 0.5
MRPL55-231	ENST00000492170	TRIM43	Q96BQ3	446 aa	Predicted RBP	18.18	■□□□□ 0.5
MRPL55-231	ENST00000492170	ACAD9	Q9H845	621 aa		18.18	■□□□□ 0.5
MRPL55-231	ENST00000492170	STARD7	Q9NQZ5	370 aa		18.18	■□□□□ 0.5
MRPL55-231	ENST00000492170	HOMER2	Q9NSB8	354 aa		18.18	■□□□□ 0.5
MRPL55-231	ENST00000492170	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
MRPL55-231	ENST00000492170	MOXD2P	A6NHM9	499 aa		18.17	■□□□□ 0.5
MRPL55-231	ENST00000492170	FOXP2	O15409	715 aa		18.17	■□□□□ 0.5
MRPL55-231	ENST00000492170	DUSP11	O75319	330 aa	Known RBP	18.17	■□□□□ 0.5
MRPL55-231	ENST00000492170	ACLY	P53396	1101 aa		18.17	■□□□□ 0.5
MRPL55-231	ENST00000492170	CTDSPL2	Q05D32	466 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms