RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 GAS2L1Q99501 681 aaPredicted RBP17.39■□□□□ 0.37
SSR4-212ENST00000491833 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.39■□□□□ 0.37
SSR4-212ENST00000491833 TEX13BQ9BXU2 312 aa17.39■□□□□ 0.37
SSR4-212ENST00000491833 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.39■□□□□ 0.37
SSR4-212ENST00000491833 ZHX1Q9UKY1 873 aaPredicted RBP17.39■□□□□ 0.37
SSR4-212ENST00000491833 TBX21Q9UL17 535 aa17.39■□□□□ 0.37
SSR4-212ENST00000491833 USP17L12C9JPN9 530 aa17.38■□□□□ 0.37
SSR4-212ENST00000491833 USP17L21D6R901 530 aa17.38■□□□□ 0.37
SSR4-212ENST00000491833 SMIM22K7EJ46 135 aa17.38■□□□□ 0.37
SSR4-212ENST00000491833 APBB1O00213 710 aa17.38■□□□□ 0.37
SSR4-212ENST00000491833 PPIGQ13427 754 aaKnown RBP eCLIP17.38■□□□□ 0.37
SSR4-212ENST00000491833 SNRNP48Q6IEG0 339 aaKnown RBP17.38■□□□□ 0.37
SSR4-212ENST00000491833 KLHDC9Q8NEP7 349 aa17.38■□□□□ 0.37
SSR4-212ENST00000491833 GLT1D1Q96MS3 346 aa17.38■□□□□ 0.37
SSR4-212ENST00000491833 SLF1Q9BQI6 1058 aa17.38■□□□□ 0.37
SSR4-212ENST00000491833 TNFRSF10AO00220 468 aa17.37■□□□□ 0.37
SSR4-212ENST00000491833 CST5P28325 142 aaPredicted RBP17.37■□□□□ 0.37
SSR4-212ENST00000491833 KCNA10Q16322 511 aa17.37■□□□□ 0.37
SSR4-212ENST00000491833 MFSD5Q6N075 450 aa17.37■□□□□ 0.37
SSR4-212ENST00000491833 CCDC129Q6ZRS4 1044 aa17.37■□□□□ 0.37
SSR4-212ENST00000491833 DDX11Q96FC9 970 aa17.37■□□□□ 0.37
SSR4-212ENST00000491833 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
SSR4-212ENST00000491833 ARPP21Q9UBL0 812 aaPredicted RBP17.37■□□□□ 0.37
SSR4-212ENST00000491833 ELP1O95163 1332 aa17.37■□□□□ 0.37
SSR4-212ENST00000491833 ZBED9Q6R2W3 1325 aa17.37■□□□□ 0.37
SSR4-212ENST00000491833 MYADML2A6NDP7 307 aa17.36■□□□□ 0.37
SSR4-212ENST00000491833 DUSP11O75319 330 aaKnown RBP17.36■□□□□ 0.37
SSR4-212ENST00000491833 SNAI1O95863 264 aaPredicted RBP17.36■□□□□ 0.37
SSR4-212ENST00000491833 C6orf222P0C671 652 aaPredicted RBP17.36■□□□□ 0.37
SSR4-212ENST00000491833 SLFNL1Q499Z3 407 aa17.36■□□□□ 0.37
SSR4-212ENST00000491833 CCSAPQ6IQ19 270 aaPredicted RBP17.36■□□□□ 0.37
SSR4-212ENST00000491833 PSRC1Q6PGN9 363 aaPredicted RBP17.36■□□□□ 0.37
SSR4-212ENST00000491833 MAMDC4Q6UXC1 1216 aa17.36■□□□□ 0.37
SSR4-212ENST00000491833 PCSK9Q8NBP7 692 aaKnown RBP17.36■□□□□ 0.37
SSR4-212ENST00000491833 BCL11AQ9H165 835 aa17.36■□□□□ 0.37
SSR4-212ENST00000491833 SPC25Q9HBM1 224 aa17.36■□□□□ 0.37
SSR4-212ENST00000491833 SLC4A4Q9Y6R1 1079 aa17.36■□□□□ 0.37
SSR4-212ENST00000491833 A0A0U1RQG5 324 aaPredicted RBP17.35■□□□□ 0.37
SSR4-212ENST00000491833 HMMRO75330 724 aa17.35■□□□□ 0.37
SSR4-212ENST00000491833 ZNF467Q7Z7K2 595 aaPredicted RBP17.35■□□□□ 0.37
SSR4-212ENST00000491833 TMEM199Q8N511 208 aa17.35■□□□□ 0.37
SSR4-212ENST00000491833 PBX4Q9BYU1 374 aa17.35■□□□□ 0.37
SSR4-212ENST00000491833 BOLA2Q9H3K6 86 aa17.35■□□□□ 0.37
SSR4-212ENST00000491833 CTDP1Q9Y5B0 961 aaPredicted RBP17.35■□□□□ 0.37
SSR4-212ENST00000491833 MUC3AQ02505 3323 aa17.35■□□□□ 0.37
SSR4-212ENST00000491833 DNAJC25-GNG10A0A024R161 153 aa17.34■□□□□ 0.37
SSR4-212ENST00000491833 TLR3O15455 904 aaKnown RBP17.34■□□□□ 0.37
SSR4-212ENST00000491833 ASGR1P07306 291 aa17.34■□□□□ 0.37
SSR4-212ENST00000491833 ACVR2BQ13705 512 aa17.34■□□□□ 0.37
SSR4-212ENST00000491833 UBE3CQ15386 1083 aa17.34■□□□□ 0.37
SSR4-212ENST00000491833 TMEM240Q5SV17 173 aa17.34■□□□□ 0.37
SSR4-212ENST00000491833 CTR9Q6PD62 1173 aa17.34■□□□□ 0.37
SSR4-212ENST00000491833 NUP88Q99567 741 aaPredicted RBP17.34■□□□□ 0.37
SSR4-212ENST00000491833 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.34■□□□□ 0.37
SSR4-212ENST00000491833 THEGQ9P2T0 379 aa17.34■□□□□ 0.37
SSR4-212ENST00000491833 TTC28Q96AY4 2481 aa17.33■□□□□ 0.37
SSR4-212ENST00000491833 ATP2A1O14983 1001 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 CSF2RAP15509 400 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 ATP5JP18859 108 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 COL9A1P20849 921 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 PBX2P40425 430 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 AKNAD1Q5T1N1 836 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 RASIP1Q5U651 963 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 ZSCAN25Q6NSZ9 544 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 PANK1Q8TE04 598 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 ATXN2LQ8WWM7 1075 aaKnown RBP17.33■□□□□ 0.36
SSR4-212ENST00000491833 PPM1EQ8WY54 764 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 VTI1AQ96AJ9 217 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 HAUS7Q99871 368 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 PPP1R12CQ9BZL4 782 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 UPF3AQ9H1J1 476 aaKnown RBP17.33■□□□□ 0.36
SSR4-212ENST00000491833 ABHD16BQ9H3Z7 469 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 PRDM12Q9H4Q4 367 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 RIPK3Q9Y572 518 aa17.33■□□□□ 0.36
SSR4-212ENST00000491833 ARVCFO00192 962 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 ADCY6O43306 1168 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 ZBED4O75132 1171 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 RAB11FIP3O75154 756 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 NDUFB10O96000 172 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 SLC4A3P48751 1232 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 CDK7P50613 346 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 GJA9P57773 515 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 RAB30Q15771 203 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.32■□□□□ 0.36
SSR4-212ENST00000491833 C16orf59Q7L2K0 433 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 FAM126BQ8IXS8 530 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 RPAP2Q8IXW5 612 aaPredicted RBP17.32■□□□□ 0.36
SSR4-212ENST00000491833 CPXCR1Q8N123 301 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 ANKRD35Q8N283 1001 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 PRPF38AQ8NAV1 312 aaKnown RBP17.32■□□□□ 0.36
SSR4-212ENST00000491833 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.32■□□□□ 0.36
SSR4-212ENST00000491833 MTIF3Q9H2K0 278 aaKnown RBP17.32■□□□□ 0.36
SSR4-212ENST00000491833 NYAP2Q9P242 653 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 FBXO40Q9UH90 709 aa17.32■□□□□ 0.36
SSR4-212ENST00000491833 MYH4Q9Y623 1939 aa17.31■□□□□ 0.36
SSR4-212ENST00000491833 GRXCR1A8MXD5 290 aa17.31■□□□□ 0.36
SSR4-212ENST00000491833 F5H6K3 240 aa17.31■□□□□ 0.36
SSR4-212ENST00000491833 CHGBP05060 677 aa17.31■□□□□ 0.36
SSR4-212ENST00000491833 ACRP10323 421 aa17.31■□□□□ 0.36
SSR4-212ENST00000491833 RASA1P20936 1047 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms